Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 1.8e-249 865.5 451 100.0
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 6.1e-242 840.5 450 94.7
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 4.5e-197 691.4 421 82.9
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 5.9e-197 691.0 421 80.8
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 9.5e-195 683.7 421 79.1
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 2.3e-193 679.1 421 80.0
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 1.3e-191 673.3 420 78.3
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 1.7e-191 672.9 449 75.3
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 2.2e-191 672.5 422 78.0
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 3.7e-191 671.8 427 77.0
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 1.1e-190 670.2 420 77.9
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 4.6e-189 664.8 420 76.9
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 1.7e-188 662.9 421 77.0
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 2.5e-187 659.1 421 77.2
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 2.5e-187 659.1 413 78.0
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 4.3e-187 658.3 421 76.2
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 9.5e-187 657.1 421 76.2
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 3.6e-186 655.2 421 73.9
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 6.2e-186 654.4 419 74.9
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 4.0e-185 651.7 419 74.5
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 5.2e-185 651.4 418 75.4
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 5.2e-185 651.4 418 74.9
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 6.8e-185 651.0 419 77.6
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 8.9e-185 650.6 420 75.5
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 3.4e-184 648.7 421 76.2
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 5.8e-184 647.9 418 74.2
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 1.3e-183 646.7 413 76.0
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 2.9e-183 645.6 420 75.5
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 5.4e-182 641.3 408 77.9
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 5.4e-182 641.3 422 75.6
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 7.0e-182 641.0 418 73.2
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 1.2e-181 640.2 422 71.1
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 1.6e-181 639.8 419 75.4
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 2.7e-181 639.0 421 72.0
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 6.0e-181 637.9 414 74.9
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 3.0e-180 635.6 419 73.7
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 3.9e-180 635.2 409 77.0
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 5.0e-180 634.8 415 74.5
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 1.2e-178 630.2 432 72.5
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 1.4e-177 626.7 415 71.8
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 2.3e-177 625.9 388 78.6
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 1.2e-176 623.6 417 73.6
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 3.4e-176 622.1 446 68.2
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 6.4e-175 617.8 415 70.4
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 1.4e-174 616.7 408 71.1
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 2.4e-174 615.9 410 72.2
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 2.4e-174 615.9 410 72.2
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 3.5e-173 612.1 431 71.7
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 6.6e-172 607.8 414 71.0
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 1.9e-171 606.3 420 70.7
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 1.6e-170 603.2 457 68.1
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 2.1e-170 602.8 386 74.4
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 4.0e-169 598.6 414 69.6
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 1.5e-168 596.7 380 76.1
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 1.1e-166 590.5 531 58.4
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 1.9e-163 579.7 388 70.4
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 5.6e-163 578.2 376 74.5
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 4.0e-161 572.0 419 70.2
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 1.5e-160 570.1 629 50.9
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 1.9e-158 563.1 421 67.9
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 2.3e-156 556.2 421 67.9
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 8.7e-156 554.3 366 72.7
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 7.3e-155 551.2 421 67.5
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 3.1e-153 545.8 421 66.3
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 9.9e-152 540.8 436 64.4
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 4.9e-151 538.5 423 66.4
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 4.9e-151 538.5 424 65.8
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 2.3e-148 529.6 424 64.4
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 8.7e-148 527.7 542 53.3
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 1.1e-147 527.3 415 66.0
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 4.3e-147 525.4 342 75.1
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 5.6e-147 525.0 347 73.8
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 2.1e-146 523.1 417 61.4
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 2.8e-146 522.7 331 77.6
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 5.5e-142 508.4 331 74.6
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 2.1e-141 506.5 408 58.8
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 1.0e-140 504.2 355 71.0
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 9.6e-139 497.7 422 58.3
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 8.2e-138 494.6 412 59.2
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 2.5e-134 483.0 319 73.0
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 4.3e-131 472.2 464 58.0
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 3.8e-127 459.1 421 58.2
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 5.5e-118 428.7 290 74.1
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 3.5e-112 409.5 320 64.1
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 1.0e-111 407.9 274 70.8
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 1.7e-111 407.1 270 74.1
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 4.8e-106 389.0 270 70.4
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 6.3e-106 388.7 441 48.1
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 2.7e-96 356.7 301 63.1
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 7.7e-96 355.1 246 69.9
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 8.8e-92 341.7 424 43.4
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 3.0e-84 316.6 317 54.6
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 8.6e-79 298.5 199 70.9
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 8.6e-79 298.5 456 39.0
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 1.7e-74 284.3 208 69.7
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 6.0e-72 275.8 171 80.1
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 2.4e-65 253.8 213 62.4
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 1.3e-55 221.5 136 78.7
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 3.1e-52 210.3 151 72.2
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 9.9e-51 205.3 421 30.9
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 5.4e-49 199.5 134 68.7
HPP92_028078 Vanilla planifolia HOM05D007061 ORTHO05D009017 1.1e-44 185.3 115 78.3
arahy.Tifrunner.gnm1.ann1.4L0SCR Arachis hypogaea HOM05D007061 ORTHO05D009017 4.2e-41 173.3 103 80.6
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 1.6e-40 171.4 101 84.2
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 3.3e-38 163.7 93 84.9
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 3.3e-38 163.7 93 84.9
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 1.2e-35 155.2 85 83.5
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 1.6e-32 144.8 75 86.7
AUR62041050 Chenopodium quinoa HOM05D007061 ORTHO05D009017 2.5e-17 94.4 62 69.4
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 1.3e-13 82.0 205 27.8
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 1.8e-12 78.2 53 62.3
Manes.04G057176 Manihot esculenta HOM05D007061 ORTHO05D005365 1.3e-10 72.0 45 75.6
Lsat_1_v5_gn_0_28960 Lactuca sativa HOM05D004968 ORTHO05D005922 5.5e-09 66.6 51 68.6
MD05G1238100 Malus domestica HOM05D007061 ORTHO05D009017 7.9e-08 62.8 49 69.4
Lsat_1_v5_gn_3_11400 Lactuca sativa HOM05D003461 ORTHO05D004386 4.3e-06 57.0 79 45.6


User provided reference genes

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