Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3819 Papaver somniferum HOM05D006255 ORTHO05D008014 8.5e-83 310.8 230 100.0
PSO541G1652 Papaver somniferum HOM05D006255 ORTHO05D008014 9.4e-74 280.8 230 93.9
TAR625G0439 Trochodendron aralioides HOM05D006255 ORTHO05D008014 5.4e-69 265.0 230 67.4
Atru.chr5.3479 Acer truncatum HOM05D006255 ORTHO05D008014 4.5e-68 261.9 230 77.0
Nn5g30887 Nelumbo nucifera HOM05D006255 ORTHO05D008014 5.9e-68 261.5 230 68.7
Aqoxy5G01073 Aquilegia oxysepala HOM05D006255 ORTHO05D008014 7.7e-68 261.2 231 74.5
PGR142G2886 Punica granatum HOM05D006255 ORTHO05D008014 2.3e-67 259.6 230 74.3
Ciclev10029213m.g Citrus clementina HOM05D006255 ORTHO05D008014 1.9e-66 256.5 230 69.1
Duzib248G1128 Durio zibethinus HOM05D006255 ORTHO05D008014 5.5e-66 255.0 230 71.7
Gohir.D12G037200 Gossypium hirsutum HOM05D006255 ORTHO05D008014 9.5e-66 254.2 230 80.9
Gohir.D01G162900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.6e-65 253.4 230 75.7
Gorai.002G202100 Gossypium raimondii HOM05D006255 ORTHO05D008014 1.6e-65 253.4 230 75.7
Prupe.8G172600 Prunus persica HOM05D006255 ORTHO05D008014 2.1e-65 253.1 230 72.6
Gorai.008G038300 Gossypium raimondii HOM05D006255 ORTHO05D008014 4.7e-65 251.9 230 81.3
Sed0016506 Sechium edule HOM05D006255 ORTHO05D008014 4.7e-65 251.9 228 59.6
Sed0013069 Sechium edule HOM05D006255 ORTHO05D008014 1.0e-64 250.8 228 69.7
Gohir.A12G035500 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.8e-64 250.0 230 72.2
THA.LOC104804084 Tarenaya hassleriana HOM05D006255 ORTHO05D008014 1.8e-64 250.0 230 71.7
Thecc.02G052300 Theobroma cacao HOM05D006255 ORTHO05D008014 1.8e-64 250.0 230 77.8
Lj9A402T69 Lonicera japonica HOM05D006255 ORTHO05D008014 3.0e-64 249.2 227 68.7
ClCG02G003730 Citrullus lanatus HOM05D006255 ORTHO05D008014 4.0e-64 248.8 229 71.6
HanXRQChr16g0527781 Helianthus annuus HOM05D006255 ORTHO05D008014 5.2e-64 248.4 229 77.7
Actinidia20544 Actinidia chinensis HOM05D006255 ORTHO05D008014 6.8e-64 248.1 228 69.3
arahy.Tifrunner.gnm1.ann1.K7U5ID Arachis hypogaea HOM05D006255 ORTHO05D008014 6.8e-64 248.1 231 71.0
Eucgr.I01476 Eucalyptus grandis HOM05D006255 ORTHO05D008014 6.8e-64 248.1 227 70.9
CsaV3_7G001410 Cucumis sativus L. HOM05D006255 ORTHO05D008014 8.9e-64 247.7 228 69.7
ECA233G3172 Erigeron canadensis HOM05D006255 ORTHO05D008014 1.5e-63 246.9 228 72.8
arahy.Tifrunner.gnm1.ann1.5E63QU Arachis hypogaea HOM05D006255 ORTHO05D008014 2.0e-63 246.5 231 70.6
CSS0039919 Camellia sinensis var. sinensis HOM05D006255 ORTHO05D008014 2.0e-63 246.5 230 63.9
Lsat_1_v5_gn_8_122201 Lactuca sativa HOM05D006255 ORTHO05D008014 2.6e-63 246.1 225 78.7
vmacro02304 Vaccinium macrocarpon HOM05D006255 ORTHO05D008014 3.4e-63 245.7 227 65.6
Potri.009G140200 Populus trichocarpa HOM05D006255 ORTHO05D008014 4.4e-63 245.4 230 71.7
Solyc01g111940.4 Solanum lycopersicum HOM05D006255 ORTHO05D008014 4.4e-63 245.4 229 70.7
Nn6g31846 Nelumbo nucifera HOM05D006255 ORTHO05D008014 5.7e-63 245.0 230 74.3
Hma1.2p1_0163F.1_g072870 Hydrangea macrophylla HOM05D006255 ORTHO05D008014 7.5e-63 244.6 228 75.4
MBI05_g35101_MAGBIO Magnolia biondii HOM05D006255 ORTHO05D008014 9.8e-63 244.2 228 64.9
Sopen01g053990 Solanum pennellii HOM05D006255 ORTHO05D008014 9.8e-63 244.2 229 70.3
TWI31G0945 Tripterygium wilfordii HOM05D006255 ORTHO05D008014 9.8e-63 244.2 230 67.4
MSTRG.16938 Avicennia marina HOM05D006255 ORTHO05D008014 1.3e-62 243.8 229 72.5
MELO3C013309.2 Cucumis melo HOM05D006255 ORTHO05D008014 1.3e-62 243.8 228 71.9
SGA_v2.0_scaffold32G13327 Striga asiatica HOM05D006255 ORTHO05D008014 2.2e-62 243.0 229 77.7
Manes.11G100600 Manihot esculenta HOM05D006255 ORTHO05D008014 3.7e-62 242.3 230 65.7
Nitab4.5_0001629g0040 Nicotiana tabacum HOM05D006255 ORTHO05D008014 3.7e-62 242.3 229 79.0
SalBow1G8078 Salvia bowleyana HOM05D006255 ORTHO05D010524 4.9e-62 241.9 228 78.5
COL.COLO4_18000 Corchorus olitorius HOM05D006255 ORTHO05D008014 1.4e-61 240.4 226 76.5
Aa31LG7G15760 Aethionema arabicum HOM05D007460 ORTHO05D009396 3.1e-61 239.2 245 71.8
MSTRG.19958 Avicennia marina HOM05D006255 ORTHO05D008014 3.1e-61 239.2 229 69.4
Nitab4.5_0003603g0130 Nicotiana tabacum HOM05D006255 ORTHO05D008014 5.4e-61 238.4 225 74.2
Medtr3g118350 Medicago truncatula HOM05D006255 ORTHO05D008014 9.2e-61 237.7 227 71.4
ATR0661G177 Amborella trichopoda HOM05D006255 ORTHO05D008014 1.2e-60 237.3 226 67.7
Aa31LG9G40 Aethionema arabicum HOM05D006255 ORTHO05D008014 1.6e-60 236.9 249 70.3
PGSC0003DMG401018633 Solanum tuberosum HOM05D006255 ORTHO05D008014 1.6e-60 236.9 225 68.0
Actinidia18024 Actinidia chinensis HOM05D006255 ORTHO05D008014 2.7e-60 236.1 228 71.5
Nitab4.5_0001215g0050 Nicotiana tabacum HOM05D006255 ORTHO05D008014 4.5e-60 235.3 229 77.3
MD10G1131800 Malus domestica HOM05D006255 ORTHO05D008014 7.8e-60 234.6 230 76.5
Dinv14143 Davidia involucrata HOM05D006255 ORTHO05D008014 1.0e-59 234.2 230 72.6
Nitab4.5_0001506g0010 Nicotiana tabacum HOM05D006255 ORTHO05D008014 1.3e-59 233.8 226 73.9
Cc09_g10450 Coffea canephora HOM05D006255 ORTHO05D008014 1.7e-59 233.4 225 70.2
Ah.01g007960 Amaranthus hybridus HOM05D006255 ORTHO05D008014 6.6e-59 231.5 230 74.8
Peaxi162Scf00362g00349 Petunia axillaris HOM05D006255 ORTHO05D008014 6.6e-59 231.5 227 75.3
unitig_0.g812 Utricularia gibba HOM05D006255 ORTHO05D008014 8.6e-59 231.1 225 72.9
Cfa005320 Carpinus fangiana HOM05D006255 ORTHO05D010524 1.1e-58 230.7 222 74.8
Carub.0001s1596 Capsella rubella HOM05D006255 ORTHO05D008014 1.5e-58 230.3 228 71.5
CiPaw.05G087400 Carya illinoinensis HOM05D006255 ORTHO05D008014 1.9e-58 229.9 230 76.5
TPR.G38579 Trifolium pratense HOM05D006255 ORTHO05D008014 3.3e-58 229.2 228 73.2
Cpa.g.sc20.136 Carica papaya HOM05D006255 ORTHO05D008014 1.2e-57 227.3 227 69.6
CANSAT25G2216 Cannabis sativa HOM05D006255 ORTHO05D008014 2.1e-57 226.5 230 73.5
FAN15G2553 Fragaria x ananassa HOM05D006255 ORTHO05D008014 2.1e-57 226.5 227 80.2
Lj4g0004587 Lotus japonicus HOM05D006255 ORTHO05D008014 2.1e-57 226.5 231 77.5
Psat5g000920 Pisum sativum HOM05D006255 ORTHO05D008014 2.1e-57 226.5 230 73.9
MD05G1128500 Malus domestica HOM05D006255 ORTHO05D008014 2.8e-57 226.1 230 78.7
CDE02G2216 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 3.6e-57 225.7 230 67.8
Phvul.009G117000 Phaseolus vulgaris HOM05D006255 ORTHO05D008014 8.0e-57 224.6 230 68.7
EL10Ac9g21307 Beta vulgaris HOM05D006255 ORTHO05D008014 1.0e-56 224.2 228 68.9
Sc08g0002620 Simmondsia chinensis HOM05D006255 ORTHO05D008014 3.1e-56 222.6 230 72.2
FvH4_2g15950 Fragaria vesca HOM05D006255 ORTHO05D008014 8.9e-56 221.1 227 80.6
FAN24G2083 Fragaria x ananassa HOM05D006255 ORTHO05D008014 2.6e-55 219.5 228 79.4
AL1G28330 Arabidopsis lyrata HOM05D006255 ORTHO05D008014 5.8e-55 218.4 228 69.7
FAN27G1328 Fragaria x ananassa HOM05D006255 ORTHO05D008014 5.8e-55 218.4 228 78.9
Ca_15278_v3 Cicer arietinum L. HOM05D006255 ORTHO05D008014 7.5e-55 218.0 228 76.8
CARHR016680 Cardamine hirsuta HOM05D006255 ORTHO05D008014 9.8e-55 217.6 228 75.0
Sabra09G0108900 Salix brachista HOM05D006255 ORTHO05D008014 1.9e-53 213.4 259 64.5
Glyma.06G001200 Glycine max HOM05D006255 ORTHO05D008014 3.2e-53 212.6 230 68.7
QL11p053294 Quercus lobata HOM05D006255 ORTHO05D008014 3.2e-53 212.6 228 73.2
Oeu029013.1 Olea europaea HOM05D006255 ORTHO05D008014 4.1e-53 212.2 226 62.8
RcHm_v2.0_Chr6g0279491 Rosa chinensis HOM05D006255 ORTHO05D008014 4.1e-53 212.2 226 78.8
Glyma.04G001700 Glycine max HOM05D006255 ORTHO05D008014 5.4e-53 211.8 230 71.7
Os04g0561600 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 1.1e-50 204.1 235 57.0
Lalb_Chr08g0246771 Lupinus albus HOM05D006255 ORTHO05D008014 7.3e-50 201.4 233 67.4
BcaB03g14828 Brassica carinata HOM05D006255 ORTHO05D008014 1.6e-49 200.3 228 66.2
Duzib132G0230 Durio zibethinus HOM05D006255 ORTHO05D008014 1.6e-49 200.3 230 74.8
BcaB03g14827 Brassica carinata HOM05D002002 ORTHO05D008711 3.6e-49 199.1 226 75.2
HPP92_025891 Vanilla planifolia HOM05D006255 ORTHO05D008014 4.7e-49 198.7 227 51.5
Haze_02065 Corylus avellana HOM05D006255 ORTHO05D008014 8.0e-49 198.0 331 53.5
Gohir.A01G171900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.8e-48 196.8 155 66.5
SMO119G0083 Selaginella moellendorffii HOM05D006255 ORTHO05D008014 5.2e-48 195.3 230 52.2
BolC6t39525H Brassica oleracea HOM05D006255 ORTHO05D008014 1.7e-46 190.3 226 71.2
AT1G16210 Arabidopsis thaliana HOM05D006255 ORTHO05D008014 2.2e-46 189.9 228 61.8
C06p44610 Brassica napus HOM05D002002 ORTHO05D008711 2.2e-46 189.9 226 71.2
VMungo1309G1654 Vigna mungo HOM05D006255 ORTHO05D008014 2.9e-46 189.5 230 69.6
CBR_g61263 Chara braunii HOM05D006255 ORTHO05D008014 1.4e-45 187.2 226 51.3
A07p37050 Brassica napus HOM05D002002 ORTHO05D008711 7.0e-45 184.9 226 69.9
Zm00001eb074070 Zea mays HOM05D006255 ORTHO05D008014 1.2e-44 184.1 237 61.2
BraA07t31267Z Brassica rapa HOM05D006255 ORTHO05D008014 1.6e-44 183.7 226 69.5
Pp3c11_730 Physcomitrium patens HOM05D006255 ORTHO05D008014 2.7e-44 183.0 228 57.0
Sp4g00050 Schrenkiella parvula HOM05D006255 ORTHO05D008014 2.7e-44 183.0 227 63.4
Pp3c11_731 Physcomitrium patens HOM05D006255 ORTHO05D008014 4.6e-44 182.2 228 57.0
AagrBONN_evm.TU.Sc2ySwM_368.1212 Anthoceros agrestis HOM05D006255 ORTHO05D008014 6.0e-44 181.8 230 57.4
HPP92_022389 Vanilla planifolia HOM05D006255 ORTHO05D008014 1.7e-43 180.3 223 45.7
Pp3c7_26990 Physcomitrium patens HOM05D006255 ORTHO05D008014 6.6e-43 178.3 228 54.4
Mapoly0058s0055 Marchantia polymorpha HOM05D006255 ORTHO05D008014 5.6e-42 175.3 226 53.1
Os03g0131800 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 1.1e-40 171.0 230 55.7
Lj5C174T15 Lonicera japonica HOM05D006255 ORTHO05D008014 1.8e-40 170.2 226 69.0
CDE09G0466 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 5.8e-39 165.2 99 77.8
CAN.G1235.32 Capsicum annuum HOM05D006255 ORTHO05D008014 1.4e-37 160.6 188 67.0
Ah.01g023450 Amaranthus hybridus HOM05D000939 ORTHO05D000745 5.4e-37 158.7 211 65.4
AUR62009986 Chenopodium quinoa HOM05D006255 ORTHO05D008014 7.8e-36 154.8 226 50.9
C06p36040 Brassica napus HOM05D006255 ORTHO05D008014 7.3e-26 121.7 105 81.0
GSVIVG01023898001 Vitis vinifera HOM05D006255 ORTHO05D008014 2.1e-25 120.2 66 83.3
AUR62012975 Chenopodium quinoa HOM05D006255 ORTHO05D008014 1.8e-24 117.1 226 46.0
Peaxi162Scf00875g00037 Petunia axillaris HOM05D006255 ORTHO05D008014 1.8e-24 117.1 95 61.1
BolC6t38725H Brassica oleracea HOM05D006255 ORTHO05D008014 7.6e-23 111.7 68 79.4
Gohir.A03G206650 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.1e-21 107.8 231 35.9
Gorai.005G255900 Gossypium raimondii HOM05D006255 ORTHO05D008014 1.7e-19 100.5 226 34.1
Cre14.g629500 Chlamydomonas reinhardtii HOM05D006255 ORTHO05D008014 2.3e-19 100.1 159 37.1
Migut.H01073 Erythranthe guttata HOM05D006255 ORTHO05D008014 3.3e-18 96.3 135 45.9
PRCOL_00005063 Prasinoderma coloniale HOM05D006255 ORTHO05D008014 7.3e-18 95.1 225 32.9
MCO11G585 Micromonas commoda HOM05D006255 ORTHO05D008014 1.2e-12 77.8 159 36.5
PSO541G1702 Papaver somniferum HOM05D006255 ORTHO05D008014 4.3e-10 69.3 167 41.9
BcaC08g45811 Brassica carinata HOM05D006255 ORTHO05D008014 7.4e-10 68.6 52 69.2


User provided reference genes

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