Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 0.0e+00 1147.1 578 100.0
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 0.0e+00 1137.5 578 99.0
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 4.2e-264 914.4 572 77.6
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 8.0e-263 910.2 579 77.0
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 4.8e-260 901.0 573 76.6
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 1.8e-259 899.0 570 77.4
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.1e-259 898.3 573 76.3
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 2.7e-258 895.2 550 78.5
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.7e-257 892.5 573 76.4
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 3.8e-257 891.3 573 76.3
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 6.8e-254 880.6 581 74.5
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 8.8e-254 880.2 578 75.4
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 1.5e-253 879.4 573 73.6
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 2.0e-253 879.0 573 73.6
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 3.4e-253 878.2 571 74.6
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 9.8e-253 876.7 549 76.3
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 6.3e-252 874.0 572 74.1
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 8.3e-252 873.6 577 73.7
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 2.4e-251 872.1 582 71.8
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 3.1e-251 871.7 573 73.1
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 4.1e-251 871.3 573 73.3
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 7.0e-251 870.5 573 72.8
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 1.2e-250 869.8 573 74.7
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 1.6e-250 869.4 569 74.3
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 1.6e-250 869.4 569 74.3
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 3.5e-250 868.2 585 71.5
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 1.0e-249 866.7 551 75.5
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 1.7e-249 865.9 574 73.3
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 2.9e-249 865.1 573 71.9
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 3.8e-249 864.8 575 72.9
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 3.8e-249 864.8 569 73.8
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 6.6e-249 864.0 569 73.6
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 8.6e-249 863.6 550 74.9
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 1.1e-248 863.2 573 72.4
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 7.3e-248 860.5 569 72.6
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 1.2e-247 859.8 547 75.7
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 1.6e-247 859.4 531 76.8
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 1.6e-247 859.4 568 72.2
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 2.1e-247 859.0 573 72.1
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 3.6e-247 858.2 578 73.0
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 4.7e-247 857.8 605 68.9
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 4.7e-247 857.8 578 73.0
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 6.1e-247 857.4 567 73.9
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 8.0e-247 857.1 572 72.2
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 8.0e-247 857.1 531 76.5
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 1.0e-246 856.7 566 73.0
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 1.8e-246 855.9 577 72.6
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 4.0e-246 854.7 573 73.5
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 6.8e-246 854.0 573 73.1
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 8.9e-246 853.6 550 73.6
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 1.2e-245 853.2 531 77.0
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 1.2e-245 853.2 578 71.3
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 1.2e-245 853.2 574 72.3
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 2.0e-245 852.4 581 70.6
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 2.6e-245 852.0 575 72.9
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 5.7e-245 850.9 573 72.9
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 3.7e-244 848.2 528 76.7
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 4.9e-244 847.8 571 71.3
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 6.4e-244 847.4 574 71.6
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 3.2e-243 845.1 514 78.0
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 4.1e-243 844.7 578 70.9
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 4.1e-243 844.7 578 70.9
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 4.1e-243 844.7 579 71.8
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 9.2e-243 843.6 574 71.1
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 9.2e-243 843.6 574 71.1
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 1.6e-242 842.8 578 70.8
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 1.6e-242 842.8 572 71.2
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 2.0e-242 842.4 580 70.9
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 2.0e-242 842.4 578 70.6
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 2.7e-242 842.0 514 77.4
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 7.8e-242 840.5 578 70.8
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 1.3e-241 839.7 578 70.4
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 1.3e-241 839.7 578 70.4
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 1.7e-241 839.3 578 71.3
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 1.7e-241 839.3 550 72.5
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 6.6e-241 837.4 578 70.4
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 6.6e-241 837.4 574 70.9
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 3.3e-240 835.1 577 70.4
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 2.8e-239 832.0 572 71.3
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 6.2e-239 830.9 582 70.8
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 8.0e-239 830.5 575 70.4
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 1.4e-238 829.7 549 72.1
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 4.0e-238 828.2 579 71.8
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 6.8e-238 827.4 596 66.8
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 2.6e-237 825.5 579 70.6
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 9.8e-237 823.5 575 71.1
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 9.8e-237 823.5 576 69.6
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 9.2e-235 817.0 621 66.3
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 2.0e-234 815.8 549 70.9
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 4.3e-232 808.1 530 72.8
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 6.2e-231 804.3 561 69.3
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 1.1e-230 803.5 571 69.2
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 4.4e-229 798.1 533 74.1
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 3.5e-226 788.5 588 67.2
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 1.5e-224 783.1 572 67.5
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 3.1e-222 775.4 558 69.7
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 2.6e-221 772.3 568 66.9
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 7.8e-218 760.8 481 75.7
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 1.4e-214 750.0 595 64.9
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 1.2e-210 736.9 500 71.8
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 2.1e-202 709.5 446 74.9
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 3.0e-201 705.7 573 63.7
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 1.4e-195 686.8 437 75.7
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 1.8e-190 669.8 434 75.1
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 1.8e-190 669.8 439 73.6
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 4.2e-187 658.7 406 75.4
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 7.2e-179 631.3 538 58.4
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 1.0e-177 627.5 437 73.0
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 1.4e-174 617.1 434 72.1
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 2.2e-167 593.2 447 68.2
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 8.5e-156 554.7 562 51.8
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 1.5e-152 543.9 439 63.6
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 4.4e-152 542.3 577 52.3
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 2.1e-146 523.5 574 48.4
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 4.7e-138 495.7 378 67.2
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 2.2e-119 433.7 579 41.6
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 8.3e-111 405.2 381 56.4
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 4.8e-90 336.3 223 68.2
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 2.9e-87 327.0 213 77.5
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 2.1e-85 320.9 387 48.6
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 6.7e-84 315.8 223 62.8
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 3.7e-82 310.1 282 59.9
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 1.3e-79 301.6 588 37.4
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 6.9e-73 279.3 546 33.7
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 1.0e-68 265.4 535 33.5
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 3.0e-60 237.3 512 35.0
Actinidia09803 Actinidia chinensis HOM05D005597 ORTHO05D007304 3.1e-49 200.7 126 73.0
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.7e-47 194.9 148 66.9
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 8.5e-47 192.6 151 64.2
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 8.8e-44 182.6 139 66.2
Atru.chr2.2170 Acer truncatum HOM05D005597 ORTHO05D007304 3.7e-42 177.2 95 77.9
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 1.9e-38 164.9 199 51.8
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 7.2e-38 162.9 138 62.3
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 5.2e-20 103.6 74 62.2
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 8.3e-18 96.3 92 55.4
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 2.0e-16 91.7 63 61.9
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 1.3e-15 89.0 50 74.0
Potri.001G392050 Populus trichocarpa HOM05D005597 ORTHO05D007304 8.0e-13 79.7 49 73.5
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 7.5e-11 73.2 59 66.1
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 3.7e-10 70.9 349 25.5
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 1.2e-08 65.9 320 27.2
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 2.0e-08 65.1 373 25.7
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 4.6e-08 63.9 372 25.0
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 1.0e-07 62.8 373 25.2
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 1.1e-06 59.3 319 25.4
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 2.5e-06 58.2 319 26.0
Mapoly0044s0100 Marchantia polymorpha HOM05D006213 ORTHO05D008107 5.6e-06 57.0 408 23.0
Aqoxy7G03239_Aqoxy7G03240 Aquilegia oxysepala HOM05D005919 ORTHO05D007176 7.3e-06 56.6 335 25.7
TAR383G0301 Trochodendron aralioides HOM05D005919 ORTHO05D007176 7.3e-06 56.6 300 24.3


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