Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3639 Papaver somniferum HOM05D006030 ORTHO05D007475 3.9e-177 624.8 338 100.0
PSO541G2932 Papaver somniferum HOM05D006030 ORTHO05D007475 9.0e-174 613.6 338 95.9
PSO541G2924 Papaver somniferum HOM05D006030 ORTHO05D007475 1.7e-79 300.4 318 58.8
TAR627G0722 Trochodendron aralioides HOM05D006030 ORTHO05D007475 7.4e-75 285.0 319 55.5
PSO675G1541 Papaver somniferum HOM05D006030 ORTHO05D007475 2.8e-74 283.1 338 53.6
TAR624G0353 Trochodendron aralioides HOM05D006030 ORTHO05D007475 1.1e-65 254.6 330 50.9
MBI18_g10587_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 2.6e-64 250.0 319 50.8
MD10G1256000 Malus domestica HOM05D006030 ORTHO05D007475 6.5e-63 245.4 309 50.8
Prupe.4G087600 Prunus persica HOM05D006030 ORTHO05D007475 1.9e-62 243.8 316 50.9
Ciclev10015995m.g Citrus clementina HOM05D006030 ORTHO05D007475 4.2e-62 242.7 315 50.8
Atru.chr10.1031 Acer truncatum HOM05D006030 ORTHO05D007475 5.1e-60 235.7 316 50.9
CiPaw.09G117700 Carya illinoinensis HOM05D006030 ORTHO05D007475 1.5e-59 234.2 316 49.1
Haze_05717 Corylus avellana HOM05D006030 ORTHO05D007475 2.8e-58 229.9 315 47.9
Cfa000873 Carpinus fangiana HOM05D006030 ORTHO05D007475 4.8e-58 229.2 315 47.6
MD05G1060100 Malus domestica HOM05D006030 ORTHO05D007475 3.1e-57 226.5 326 46.6
Dinv21492 Davidia involucrata HOM05D006030 ORTHO05D007475 1.2e-56 224.6 308 49.4
QL05p054330 Quercus lobata HOM05D006030 ORTHO05D007475 1.5e-56 224.2 308 48.7
CSS0019216 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 2.0e-56 223.8 305 46.9
Hma1.2p1_0689F.1_g203740 Hydrangea macrophylla HOM05D006030 ORTHO05D007475 3.4e-56 223.0 318 47.2
CSS0008742 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 5.9e-56 222.2 330 43.9
TWI09G0666 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 5.9e-56 222.2 318 46.2
Nn4g26650 Nelumbo nucifera HOM05D006030 ORTHO05D007475 2.9e-55 219.9 314 46.2
FAN16G0477 Fragaria x ananassa HOM05D006030 ORTHO05D007475 3.8e-55 219.5 312 50.6
Aqoxy1G01654 Aquilegia oxysepala HOM05D006030 ORTHO05D007475 8.5e-55 218.4 304 45.4
FAN21G0577 Fragaria x ananassa HOM05D006030 ORTHO05D007475 2.5e-54 216.9 312 50.3
FAN25G1233 Fragaria x ananassa HOM05D006030 ORTHO05D007475 2.5e-54 216.9 312 50.3
RcHm_v2.0_Chr5g0015101 Rosa chinensis HOM05D006030 ORTHO05D007475 3.2e-54 216.5 312 49.4
FvH4_3g09520 Fragaria vesca HOM05D006030 ORTHO05D007475 5.5e-54 215.7 312 50.0
FAN11G1717 Fragaria x ananassa HOM05D006030 ORTHO05D007475 7.2e-54 215.3 312 50.0
TWI53G0643 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 4.6e-53 212.6 313 45.0
CSS0023088 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 6.1e-53 212.2 305 44.9
Potri.011G091700 Populus trichocarpa HOM05D006030 ORTHO05D007475 1.8e-52 210.7 316 46.5
Thecc.02G010100 Theobroma cacao HOM05D006030 ORTHO05D007475 3.0e-52 209.9 316 46.5
Actinidia39595 Actinidia chinensis HOM05D006030 ORTHO05D007475 6.7e-52 208.8 316 45.3
MELO3C002779.2 Cucumis melo HOM05D006030 ORTHO05D007475 6.7e-52 208.8 314 43.6
Sp6g03610 Schrenkiella parvula HOM05D006030 ORTHO05D007475 1.5e-51 207.6 320 43.8
Rhsim02G0159700 Rhododendron simsii HOM05D006030 ORTHO05D007475 1.9e-51 207.2 323 46.1
Thhalv10029201m.g Eutrema salsugineum HOM05D006030 ORTHO05D007475 2.5e-51 206.8 320 44.1
ClCG03G006430 Citrullus lanatus HOM05D006030 ORTHO05D007475 3.3e-51 206.5 343 42.3
Lj1A1167T61 Lonicera japonica HOM05D006030 ORTHO05D007475 4.3e-51 206.1 321 45.8
MBI02_g11375_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 6.3e-50 202.2 295 45.1
Manes.15G125900 Manihot esculenta HOM05D006030 ORTHO05D007475 6.3e-50 202.2 309 47.2
Nitab4.5_0000315g0160 Nicotiana tabacum HOM05D006030 ORTHO05D007475 1.4e-49 201.1 307 44.3
Nitab4.5_0008802g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 1.8e-49 200.7 307 44.3
Duzib132G1046 Durio zibethinus HOM05D006030 ORTHO05D007475 2.4e-49 200.3 313 45.4
Aa31LG9G8890 Aethionema arabicum HOM05D006030 ORTHO05D007475 3.1e-49 199.9 316 44.0
CsaV3_1G036960 Cucumis sativus L. HOM05D006030 ORTHO05D007475 3.1e-49 199.9 314 43.0
CARHR252040 Cardamine hirsuta HOM05D006030 ORTHO05D007475 4.1e-49 199.5 321 40.8
Sabra11G0085900 Salix brachista HOM05D006030 ORTHO05D007475 6.9e-49 198.7 311 45.3
MSTRG.14783 Avicennia marina HOM05D006030 ORTHO05D007475 1.5e-48 197.6 318 44.7
Sed0012497 Sechium edule HOM05D006030 ORTHO05D007475 2.0e-48 197.2 334 41.6
CANSAT35G1388 Cannabis sativa HOM05D006030 ORTHO05D007475 4.5e-48 196.1 312 44.2
Peaxi162Scf00045g00235 Petunia axillaris HOM05D000253 ORTHO05D000149 5.9e-48 195.7 307 43.3
Cc09_g08600 Coffea canephora HOM05D006030 ORTHO05D007475 1.3e-47 194.5 312 44.6
Migut.H01344 Erythranthe guttata HOM05D006030 ORTHO05D007475 1.3e-47 194.5 335 43.6
AT4G03620 Arabidopsis thaliana HOM05D006030 ORTHO05D007475 1.7e-47 194.1 321 41.1
Peaxi162Scf00333g00215 Petunia axillaris HOM05D006030 ORTHO05D007475 2.2e-47 193.7 307 42.7
AL6G49160 Arabidopsis lyrata HOM05D006030 ORTHO05D007475 3.8e-47 193.0 321 40.8
Lj2A324T65 Lonicera japonica HOM05D006030 ORTHO05D007475 3.8e-47 193.0 295 43.7
Manes.17G075000 Manihot esculenta HOM05D006030 ORTHO05D007475 3.8e-47 193.0 316 44.0
Lj6g0008094 Lotus japonicus HOM05D006030 ORTHO05D007475 6.5e-47 192.2 300 43.3
Nn3g20281 Nelumbo nucifera HOM05D006030 ORTHO05D007475 1.1e-46 191.4 256 47.7
Medtr2g018890 Medicago truncatula HOM05D006030 ORTHO05D007475 1.4e-46 191.0 303 41.3
Duzib052G0461 Durio zibethinus HOM05D006030 ORTHO05D007475 1.9e-46 190.7 309 43.4
Carub.0006s3344 Capsella rubella HOM05D006030 ORTHO05D007475 2.5e-46 190.3 322 41.9
Psat1g191320 Pisum sativum HOM05D006030 ORTHO05D007475 3.2e-46 189.9 303 40.9
Sed0007526 Sechium edule HOM05D006030 ORTHO05D007475 9.4e-46 188.3 305 40.7
BcaB01g01909 Brassica carinata HOM05D006030 ORTHO05D007475 1.6e-45 187.6 320 42.2
Nitab4.5_0000717g0050 Nicotiana tabacum HOM05D006030 ORTHO05D007475 1.6e-45 187.6 306 42.2
Phvul.006G167100 Phaseolus vulgaris HOM05D006030 ORTHO05D007475 2.1e-45 187.2 310 41.0
A09p02880 Brassica napus HOM05D006030 ORTHO05D007475 2.7e-45 186.8 321 42.7
COL.COLO4_17663 Corchorus olitorius HOM05D006030 ORTHO05D007475 3.6e-45 186.4 323 42.1
TPR.G26249 Trifolium pratense HOM05D006030 ORTHO05D007475 4.6e-45 186.0 299 40.8
BraA09t35933Z Brassica rapa HOM05D006030 ORTHO05D007475 7.9e-45 185.3 324 42.9
Nitab4.5_0002900g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 1.0e-44 184.9 306 41.5
PGSC0003DMG400005380 Solanum tuberosum HOM05D006030 ORTHO05D007475 1.0e-44 184.9 305 41.6
Eucgr.E02463 Eucalyptus grandis HOM05D006030 ORTHO05D007475 1.4e-44 184.5 276 43.1
Glyma.15G092100 Glycine max HOM05D006030 ORTHO05D007475 1.8e-44 184.1 310 42.3
BcaC04g23958 Brassica carinata HOM05D006030 ORTHO05D007475 3.0e-44 183.3 321 42.4
BolC9t53223H Brassica oleracea HOM05D006030 ORTHO05D007475 3.0e-44 183.3 321 42.4
PGR031G1516 Punica granatum HOM05D006030 ORTHO05D007475 3.9e-44 183.0 263 49.4
C09p02960 Brassica napus HOM05D006030 ORTHO05D007475 5.1e-44 182.6 321 42.4
DCAR_007858 Daucus carota HOM05D006030 ORTHO05D007475 8.8e-44 181.8 295 42.7
Sc05g0005830 Simmondsia chinensis HOM05D006030 ORTHO05D007475 1.1e-43 181.4 313 41.9
Solyc08g023270.3 Solanum lycopersicum HOM05D006030 ORTHO05D007475 1.1e-43 181.4 305 41.6
Sopen08g008180 Solanum pennellii HOM05D006030 ORTHO05D007475 1.1e-43 181.4 305 41.6
EL10Ac8g19610 Beta vulgaris HOM05D006030 ORTHO05D007475 1.5e-43 181.0 308 41.6
Ca_00520_v3 Cicer arietinum L. HOM05D006030 ORTHO05D007475 3.3e-43 179.9 309 39.2
SalBow7G1462 Salvia bowleyana HOM05D006030 ORTHO05D007475 3.3e-43 179.9 323 40.9
SalBow7G3121 Salvia bowleyana HOM05D006030 ORTHO05D007475 3.3e-43 179.9 323 40.9
CAN.G36.30 Capsicum annuum HOM05D006030 ORTHO05D007475 2.8e-42 176.8 305 41.3
Lalb_Chr15g0086701 Lupinus albus HOM05D006030 ORTHO05D007475 3.7e-42 176.4 300 40.7
AUR62030127 Chenopodium quinoa HOM05D006030 ORTHO05D007475 6.3e-42 175.6 303 41.3
Glyma.13G220300 Glycine max HOM05D006030 ORTHO05D007475 1.1e-41 174.9 303 41.9
VMungo0540G2189 Vigna mungo HOM05D006030 ORTHO05D007475 3.1e-41 173.3 283 42.0
AUR62002659 Chenopodium quinoa HOM05D006030 ORTHO05D007475 4.1e-41 172.9 306 40.8
Hund21555 Selenicereus undatus HOM05D006030 ORTHO05D007475 4.1e-41 172.9 318 39.3
Lalb_Chr20g0117731 Lupinus albus HOM05D006030 ORTHO05D007475 5.3e-41 172.6 301 40.2
DCAR_027876 Daucus carota HOM05D006030 ORTHO05D007475 6.9e-41 172.2 294 41.5
ECA236G5152 Erigeron canadensis HOM05D006030 ORTHO05D007475 6.9e-41 172.2 304 40.8
HanXRQChr04g0112111 Helianthus annuus HOM05D006030 ORTHO05D007475 9.1e-41 171.8 314 39.2
Lsat_1_v5_gn_1_116040 Lactuca sativa HOM05D006030 ORTHO05D007475 3.4e-40 169.9 317 39.1
THA.LOC104806979 Tarenaya hassleriana HOM05D006030 ORTHO05D007475 3.4e-40 169.9 321 38.9
SalBow8G3821 Salvia bowleyana HOM05D006030 ORTHO05D007475 5.9e-40 169.1 328 38.1
HanXRQChr15g0481561 Helianthus annuus HOM05D006030 ORTHO05D007475 3.2e-38 163.3 317 38.5
Lalb_Chr18g0055221 Lupinus albus HOM05D006030 ORTHO05D007475 5.5e-38 162.5 296 38.9
GSVIVG01021577001 Vitis vinifera HOM05D006030 ORTHO05D007475 5.5e-38 162.5 222 49.5
Ah.09g232450 Amaranthus hybridus HOM05D006030 ORTHO05D007475 3.6e-37 159.8 292 38.7
DCAR_003876 Daucus carota HOM05D006030 ORTHO05D007475 4.7e-37 159.5 269 43.5
arahy.Tifrunner.gnm1.ann1.IB7BS1 Arachis hypogaea HOM05D006030 ORTHO05D007475 3.3e-35 153.3 280 37.9
MSTRG.13261 Avicennia marina HOM05D006030 ORTHO05D007475 3.3e-35 153.3 314 37.6
arahy.Tifrunner.gnm1.ann1.Z0KP5S Arachis hypogaea HOM05D006030 ORTHO05D007475 5.7e-35 152.5 279 38.0
SGA_v2.0_scaffold51G18644 Striga asiatica HOM05D006030 ORTHO05D007475 2.2e-34 150.6 287 39.7
Solyc02g021450.2 Solanum lycopersicum HOM05D006030 ORTHO05D007475 1.7e-31 141.0 294 35.0
PGSC0003DMG400031336 Solanum tuberosum HOM05D006030 ORTHO05D007475 5.0e-31 139.4 294 36.1
Sopen02g005930 Solanum pennellii HOM05D006030 ORTHO05D007475 1.9e-30 137.5 294 34.7
Lsat_1_v5_gn_7_32280 Lactuca sativa HOM05D006030 ORTHO05D007475 2.5e-30 137.1 282 37.9
ATR0626G038 Amborella trichopoda HOM05D006030 ORTHO05D007475 3.0e-28 130.2 230 41.7
HPP92_019506 Vanilla planifolia HOM05D006030 ORTHO05D007475 1.5e-27 127.9 274 37.2
arahy.Tifrunner.gnm1.ann1.TN2AI9 Arachis hypogaea HOM05D006030 ORTHO05D007475 5.7e-27 125.9 287 33.8
arahy.Tifrunner.gnm1.ann1.DKT922 Arachis hypogaea HOM05D006030 ORTHO05D007475 9.7e-27 125.2 287 33.8
Migut.M01870 Erythranthe guttata HOM05D006030 ORTHO05D007475 4.1e-25 119.8 149 53.7
Cpa.g.sc17.66 Carica papaya HOM05D006030 ORTHO05D007475 2.2e-23 114.0 150 46.7
unitig_37.g12083 Utricularia gibba HOM05D006030 ORTHO05D007475 6.8e-20 102.4 197 35.5
Peaxi162Scf00333g00214 Petunia axillaris HOM05D006030 ORTHO05D007475 6.5e-15 85.9 105 49.5
Nn1g09396 Nelumbo nucifera HOM05D006030 ORTHO05D007475 1.8e-12 77.8 174 37.9
SEGI_26103 Sequoiadendron giganteum HOM05D006030 ORTHO05D007475 4.0e-12 76.6 301 28.2
Duzib248G1648 Durio zibethinus HOM05D006030 ORTHO05D007475 9.8e-11 72.0 98 43.9


User provided reference genes

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