Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 2.2e-106 389.0 202 100.0
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 2.4e-105 385.6 202 99.0
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 2.2e-58 229.6 200 61.5
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 5.4e-57 224.9 200 60.5
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 2.3e-55 219.5 200 59.5
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 6.6e-55 218.0 200 58.5
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 1.5e-54 216.9 200 57.5
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.2e-53 213.8 200 55.5
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 1.6e-53 213.4 200 57.5
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 3.6e-53 212.2 200 58.0
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 3.6e-53 212.2 200 58.5
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 6.2e-53 211.5 200 56.5
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 6.2e-53 211.5 200 56.5
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 1.4e-52 210.3 202 55.9
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 1.4e-52 210.3 202 53.5
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 1.8e-52 209.9 200 58.5
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 2.3e-52 209.5 200 54.5
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 5.2e-52 208.4 202 53.5
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 6.8e-52 208.0 205 53.2
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 1.5e-51 206.8 200 57.5
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 2.0e-51 206.5 200 56.5
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 2.6e-51 206.1 202 55.0
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 7.6e-51 204.5 201 56.7
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 1.3e-50 203.8 200 56.0
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 2.2e-50 203.0 202 54.0
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 2.9e-50 202.6 200 53.0
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 4.9e-50 201.8 200 53.5
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 6.4e-50 201.4 200 55.0
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 1.4e-49 200.3 202 54.5
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 1.9e-49 199.9 203 53.2
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 2.4e-49 199.5 200 53.0
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 4.1e-49 198.7 201 55.2
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 1.2e-48 197.2 200 53.0
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 1.2e-48 197.2 187 56.1
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 1.6e-48 196.8 202 53.0
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 2.1e-48 196.4 200 52.0
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 2.1e-48 196.4 200 52.0
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 2.1e-48 196.4 200 52.5
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 3.5e-48 195.7 200 52.0
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 7.8e-48 194.5 207 53.1
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 2.3e-47 193.0 200 52.0
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 6.6e-47 191.4 206 50.5
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 1.5e-46 190.3 200 55.0
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 3.3e-46 189.1 202 51.5
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 4.3e-46 188.7 200 51.5
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 9.6e-46 187.6 200 50.5
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 1.2e-45 187.2 206 49.5
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 1.6e-45 186.8 187 56.7
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 2.8e-45 186.0 187 56.1
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 3.6e-45 185.7 200 50.5
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 3.6e-45 185.7 200 50.5
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 4.7e-45 185.3 202 51.5
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 8.1e-45 184.5 188 52.7
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 1.1e-44 184.1 200 52.5
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 3.1e-44 182.6 196 53.1
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 3.1e-44 182.6 197 49.7
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 3.1e-44 182.6 192 48.4
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 4.0e-44 182.2 182 52.7
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 5.2e-44 181.8 198 48.5
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 5.2e-44 181.8 200 48.5
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.6e-43 179.5 200 49.5
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 3.4e-43 179.1 200 50.0
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 1.3e-42 177.2 196 51.0
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 1.7e-42 176.8 165 54.5
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 1.7e-42 176.8 187 53.5
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 2.9e-42 176.0 200 50.0
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 6.4e-42 174.9 188 50.0
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 1.4e-41 173.7 199 46.7
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 2.4e-41 172.9 187 51.3
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 5.4e-41 171.8 200 46.0
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 1.2e-40 170.6 202 47.5
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 1.2e-40 170.6 239 43.5
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.1e-40 169.9 187 49.7
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 3.5e-40 169.1 202 45.5
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 7.8e-40 167.9 202 45.5
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 1.0e-39 167.5 202 45.0
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 1.0e-39 167.5 202 46.5
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 1.3e-39 167.2 200 47.0
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 1.7e-39 166.8 200 47.0
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 2.3e-39 166.4 187 50.3
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 3.0e-39 166.0 187 49.7
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 3.3e-38 162.5 262 40.5
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 4.3e-38 162.2 187 48.7
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 2.8e-37 159.5 183 48.6
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 6.2e-37 158.3 202 44.1
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 8.1e-37 157.9 163 53.4
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 2.4e-36 156.4 202 43.6
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 3.1e-36 156.0 202 44.1
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 4.0e-36 155.6 189 46.6
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 5.3e-36 155.2 234 40.2
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 6.9e-36 154.8 146 56.8
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 2.9e-34 149.4 206 40.8
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 4.9e-34 148.7 159 49.7
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 6.4e-34 148.3 157 50.3
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 1.2e-32 144.1 199 41.7
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 3.5e-32 142.5 154 53.2
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 3.9e-31 139.0 156 48.7
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 3.3e-30 136.0 169 46.2
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 2.8e-29 132.9 141 51.1
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 6.2e-29 131.7 195 39.5
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 1.8e-28 130.2 189 43.4
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 2.0e-27 126.7 111 59.5
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 4.5e-27 125.6 148 49.3
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 7.6e-27 124.8 187 40.6
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.9e-25 120.2 118 55.9
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 1.2e-24 117.5 146 44.5
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 2.8e-21 106.3 116 51.7
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 4.5e-19 99.0 90 60.0
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 5.8e-19 98.6 108 45.4
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 2.2e-18 96.7 193 33.7
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 8.4e-18 94.7 85 56.5
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 1.1e-17 94.4 121 45.5
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 1.1e-17 94.4 146 39.7
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 3.2e-17 92.8 147 38.8
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 7.1e-17 91.7 145 38.6
Cfa015562 Carpinus fangiana HOM05D006640 ORTHO05D008078 3.5e-16 89.4 186 31.7
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 7.9e-16 88.2 102 49.0
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 3.3e-14 82.8 107 40.2
RcHm_v2.0_Chr3g0481391 Rosa chinensis HOM05D006640 ORTHO05D008078 3.3e-14 82.8 85 52.9
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 3.7e-13 79.3 169 32.0
vmacro03672 Vaccinium macrocarpon HOM05D002991 ORTHO05D003480 6.1e-08 62.0 48 60.4
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 6.7e-07 58.5 60 45.0


User provided reference genes

Program Settings