Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 3.9e-126 454.9 248 100.0
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 2.2e-124 449.1 248 98.4
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 5.6e-80 301.6 233 67.0
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 6.2e-79 298.1 229 67.7
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 1.8e-78 296.6 216 71.3
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 2.3e-78 296.2 242 66.9
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.1e-78 295.8 245 64.1
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 1.2e-77 293.9 248 65.3
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 3.4e-77 292.4 245 63.3
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 4.4e-77 292.0 248 66.5
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 4.4e-77 292.0 242 62.8
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 5.8e-77 291.6 242 64.5
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 1.7e-76 290.0 234 65.8
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 2.2e-76 289.7 224 68.3
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 2.2e-76 289.7 239 65.7
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 6.4e-76 288.1 252 64.7
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 8.3e-76 287.7 243 65.0
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.1e-75 287.3 242 65.7
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.9e-75 286.6 242 64.5
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.9e-75 286.6 242 64.5
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 2.4e-75 286.2 242 63.6
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 2.4e-75 286.2 230 64.3
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 2.4e-75 286.2 240 63.3
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 3.2e-75 285.8 233 65.2
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 3.2e-75 285.8 224 66.1
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 9.2e-75 284.3 240 66.7
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 9.2e-75 284.3 236 63.6
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 2.1e-74 283.1 249 64.7
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 2.7e-74 282.7 248 63.3
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 3.5e-74 282.3 242 64.5
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 4.6e-74 282.0 215 67.0
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 4.6e-74 282.0 232 62.5
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 6.0e-74 281.6 240 62.1
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 7.8e-74 281.2 248 63.3
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 7.8e-74 281.2 238 62.6
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 7.8e-74 281.2 240 62.5
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 1.7e-73 280.0 217 66.8
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 2.3e-73 279.6 231 63.2
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 3.0e-73 279.3 248 60.9
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 3.9e-73 278.9 215 66.5
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 5.1e-73 278.5 249 61.0
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 5.1e-73 278.5 240 61.7
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 3.3e-72 275.8 204 69.6
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 5.6e-72 275.0 230 62.6
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 1.2e-71 273.9 215 65.6
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 1.6e-71 273.5 225 63.6
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 2.1e-71 273.1 210 67.6
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 2.1e-71 273.1 232 63.8
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 3.6e-71 272.3 242 59.9
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 3.6e-71 272.3 231 60.6
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 3.6e-71 272.3 230 61.3
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 3.6e-71 272.3 216 64.8
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 6.2e-71 271.6 231 61.5
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 6.2e-71 271.6 242 60.7
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 6.2e-71 271.6 214 64.0
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 8.1e-71 271.2 214 63.6
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 1.1e-70 270.8 242 62.0
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 1.4e-70 270.4 250 58.0
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 1.4e-70 270.4 214 63.6
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 4.0e-70 268.9 226 61.5
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 4.0e-70 268.9 232 64.2
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 5.2e-70 268.5 225 61.8
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 5.2e-70 268.5 207 67.6
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 6.8e-70 268.1 216 63.9
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 6.8e-70 268.1 216 63.9
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 1.2e-69 267.3 225 61.3
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.2e-69 267.3 236 61.9
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 1.2e-69 267.3 214 63.1
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 1.5e-69 266.9 221 59.7
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 2.0e-69 266.5 231 59.3
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 2.6e-69 266.2 228 62.7
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 3.4e-69 265.8 225 61.3
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 3.4e-69 265.8 250 57.2
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 3.4e-69 265.8 251 57.8
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 4.4e-69 265.4 214 62.1
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 7.5e-69 264.6 225 61.3
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 7.5e-69 264.6 243 61.3
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 1.7e-68 263.5 235 59.6
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 2.9e-68 262.7 214 62.6
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 3.7e-68 262.3 217 63.6
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 4.9e-68 261.9 223 61.9
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 1.9e-67 260.0 217 61.3
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 1.9e-67 260.0 235 59.1
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 1.6e-66 256.9 248 57.3
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 7.8e-66 254.6 217 60.8
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 1.3e-65 253.8 246 56.5
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 2.3e-65 253.1 228 59.6
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 5.1e-65 251.9 240 57.1
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 5.1e-65 251.9 235 58.3
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 6.6e-65 251.5 225 60.4
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 1.1e-62 244.2 196 61.2
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 3.8e-60 235.7 231 56.7
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 9.2e-59 231.1 196 62.2
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 1.2e-58 230.7 234 54.3
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 2.3e-57 226.5 209 59.3
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 1.1e-54 217.6 169 68.6
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 4.0e-54 215.7 175 64.0
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.6e-53 213.0 178 65.2
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 2.9e-52 209.5 207 52.7
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 3.6e-47 192.6 225 47.1
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.7e-36 157.1 157 58.6
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 4.2e-35 152.5 154 53.2
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 4.2e-35 152.5 236 43.2
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 7.6e-29 131.7 110 63.6
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 3.2e-27 126.3 99 66.7
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 1.2e-26 124.4 93 68.8
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.0e-25 121.3 207 39.1
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 3.6e-18 96.3 78 64.1
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 7.9e-18 95.1 209 32.5
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 1.4e-14 84.3 156 34.6
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.6e-10 70.9 51 72.5
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 5.7e-08 62.4 52 59.6


User provided reference genes

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