Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 4.4e-245 850.9 442 100.0
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 6.8e-238 827.0 443 98.0
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 2.7e-170 602.4 410 75.6
PSO339G1025 Papaver somniferum HOM05D003649 ORTHO05D004498 4.8e-167 591.7 449 70.6
PSO339G4670 Papaver somniferum HOM05D003649 ORTHO05D004498 3.1e-166 589.0 449 70.4
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 9.4e-163 577.4 448 69.9
Nn7g38381 Nelumbo nucifera HOM05D003649 ORTHO05D004498 9.4e-163 577.4 443 69.8
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 1.2e-162 577.0 446 68.6
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 1.6e-162 576.6 449 67.7
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 7.9e-162 574.3 450 68.2
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.4e-161 573.5 445 68.8
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 1.5e-160 570.1 449 67.7
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 2.0e-160 569.7 448 69.4
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 4.4e-160 568.5 440 67.5
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 9.7e-160 567.4 449 67.5
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 2.2e-159 566.2 449 67.5
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 7.0e-158 561.2 447 67.3
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 2.6e-157 559.3 442 68.1
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 3.8e-156 555.4 416 69.5
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 1.4e-155 553.5 447 67.3
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 9.4e-155 550.8 449 65.7
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 2.3e-153 546.2 458 65.3
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 1.5e-152 543.5 448 64.7
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 2.0e-152 543.1 459 64.3
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 2.6e-152 542.7 443 65.7
TAR627G1042 Trochodendron aralioides HOM05D003649 ORTHO05D004498 3.7e-151 538.9 368 76.1
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 1.4e-150 537.0 449 65.5
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.4e-150 537.0 443 64.8
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 1.8e-150 536.6 447 65.5
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 3.1e-150 535.8 444 64.9
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 7.0e-150 534.6 447 65.5
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 9.1e-150 534.3 446 66.4
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 1.2e-149 533.9 467 63.6
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 1.0e-148 530.8 432 66.0
Actinidia37054 Actinidia chinensis HOM05D003649 ORTHO05D004498 2.2e-148 529.6 400 68.8
Lsat_1_v5_gn_5_148460 Lactuca sativa HOM05D003649 ORTHO05D004498 2.9e-148 529.3 448 63.4
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 5.0e-148 528.5 441 63.5
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 5.0e-148 528.5 414 67.4
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 2.5e-147 526.2 455 61.8
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 3.2e-147 525.8 459 63.8
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 5.5e-147 525.0 463 61.3
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 5.5e-147 525.0 438 64.8
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 1.4e-145 520.4 448 61.6
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 2.3e-145 519.6 415 68.0
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 3.0e-145 519.2 421 66.5
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 1.2e-144 517.3 428 65.9
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 1.5e-144 516.9 379 72.3
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 2.0e-144 516.5 421 65.8
Sabra11G0099700 Salix brachista HOM05D003649 ORTHO05D004498 2.0e-144 516.5 435 64.8
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 5.7e-144 515.0 413 65.1
Nitab4.5_0001924g0070 Nicotiana tabacum HOM05D003649 ORTHO05D004498 4.8e-143 511.9 404 67.1
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 6.3e-143 511.5 449 61.0
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 6.3e-143 511.5 429 64.3
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 1.4e-142 510.4 436 63.3
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 4.1e-142 508.8 447 60.9
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 5.3e-142 508.4 448 60.3
Peaxi162Scf00111g00723 Petunia axillaris HOM05D003649 ORTHO05D004498 5.3e-142 508.4 447 62.9
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 7.0e-142 508.1 442 63.3
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 7.0e-142 508.1 425 64.2
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 1.2e-141 507.3 420 64.5
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 1.6e-141 506.9 445 61.8
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 2.0e-141 506.5 425 64.0
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 2.7e-141 506.1 452 60.0
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 2.7e-141 506.1 472 58.1
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 5.9e-141 505.0 416 65.4
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 2.9e-140 502.7 445 61.1
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 3.8e-140 502.3 478 57.5
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 6.5e-140 501.5 453 60.0
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 6.5e-140 501.5 449 61.2
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 3.2e-139 499.2 373 68.9
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 7.2e-139 498.0 446 59.9
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 2.3e-137 493.0 325 73.8
FAN21G1332 Fragaria x ananassa HOM05D003649 ORTHO05D004498 4.0e-137 492.3 467 57.0
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 5.2e-137 491.9 457 59.3
FAN11G3158 Fragaria x ananassa HOM05D003649 ORTHO05D004498 6.8e-137 491.5 464 57.3
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 1.2e-136 490.7 440 59.3
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 1.5e-136 490.3 453 58.9
Rhsim09G0104400 Rhododendron simsii HOM05D003649 ORTHO05D004498 4.4e-136 488.8 437 62.5
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 5.7e-136 488.4 453 58.7
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 5.7e-136 488.4 441 59.2
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 5.7e-136 488.4 452 58.6
AUR62035508 Chenopodium quinoa HOM05D003649 ORTHO05D004498 1.7e-135 486.9 444 59.0
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 2.8e-135 486.1 503 54.9
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 6.3e-135 485.0 452 59.5
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 1.8e-134 483.4 420 62.1
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 2.0e-133 479.9 439 58.5
MD05G1209000 Malus domestica HOM05D003649 ORTHO05D004498 2.7e-133 479.6 383 66.1
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 1.0e-132 477.6 491 57.2
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.0e-132 477.6 437 59.3
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 1.7e-132 476.9 336 70.8
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 2.3e-132 476.5 417 60.7
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 2.9e-132 476.1 430 58.4
FAN16G3269 Fragaria x ananassa HOM05D003649 ORTHO05D004498 2.9e-132 476.1 440 58.6
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 6.6e-132 474.9 464 58.4
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 4.7e-130 468.8 434 60.1
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 1.4e-129 467.2 435 57.9
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 1.8e-129 466.8 432 58.1
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea HOM05D003649 ORTHO05D004498 2.3e-129 466.5 409 58.9
Nitab4.5_0001864g0020 Nicotiana tabacum HOM05D003649 ORTHO05D004498 4.0e-129 465.7 323 70.9
PGSC0003DMG400027653 Solanum tuberosum HOM05D003649 ORTHO05D004498 4.0e-129 465.7 389 62.7
Cpa.g.sc54.5 Carica papaya HOM05D003649 ORTHO05D004498 5.2e-129 465.3 471 56.5
Psat2g144640 Pisum sativum HOM05D003649 ORTHO05D004498 2.2e-127 459.9 405 59.3
Lj1C808T9 Lonicera japonica HOM05D003649 ORTHO05D004498 2.0e-125 453.4 377 65.0
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea HOM05D003649 ORTHO05D004498 1.0e-124 451.1 451 54.8
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 1.7e-124 450.3 424 59.0
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea HOM05D003649 ORTHO05D004498 8.6e-124 448.0 399 57.9
Migut.M00658 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.9e-123 446.8 422 58.1
VMungo1127G0750 Vigna mungo HOM05D003649 ORTHO05D004498 2.5e-123 446.4 367 64.0
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 4.3e-123 445.7 484 54.5
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 1.2e-122 444.1 459 54.9
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 1.6e-122 443.7 308 72.1
Sopen07g029910 Solanum pennellii HOM05D003649 ORTHO05D004498 4.7e-122 442.2 341 67.2
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 8.0e-122 441.4 451 53.9
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 1.3e-119 434.1 459 52.9
HPP92_001514 Vanilla planifolia HOM05D003649 ORTHO05D004498 2.2e-119 433.3 401 59.4
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 1.4e-118 430.6 381 59.6
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 1.9e-118 430.3 451 52.8
Migut.M00659 Erythranthe guttata HOM05D003649 ORTHO05D004498 2.7e-117 426.4 462 54.3
Solyc07g056550.3 Solanum lycopersicum HOM05D003649 ORTHO05D004498 6.6e-116 421.8 317 67.8
COL.COLO4_22663 Corchorus olitorius HOM05D003649 ORTHO05D004498 8.6e-116 421.4 470 52.3
Thecc.09G275100 Theobroma cacao HOM05D003649 ORTHO05D004498 1.5e-115 420.6 320 67.5
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 3.6e-114 416.0 449 52.3
vmacro10597 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 4.7e-114 415.6 508 50.2
Zm00001eb065940 Zea mays HOM05D003649 ORTHO05D004498 9.8e-112 407.9 464 53.9
Mapoly0048s0058 Marchantia polymorpha HOM05D003649 ORTHO05D004498 2.9e-111 406.4 437 51.5
Ah.13g066610 Amaranthus hybridus HOM05D003649 ORTHO05D004498 4.1e-110 402.5 358 60.3
CBR_g984 Chara braunii HOM05D003649 ORTHO05D004498 5.1e-108 395.6 405 53.6
Gohir.A09G098001 Gossypium hirsutum HOM05D003649 ORTHO05D004498 2.5e-107 393.3 264 75.0
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis HOM05D003649 ORTHO05D004498 1.2e-106 391.0 329 59.6
BcaC05g27183 Brassica carinata HOM05D003649 ORTHO05D004498 8.1e-106 388.3 420 52.4
CANSAT80G0167 Cannabis sativa HOM05D003649 ORTHO05D004498 2.6e-104 383.3 301 66.1
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 5.8e-104 382.1 446 49.3
MCO03G098 Micromonas commoda HOM05D003649 ORTHO05D004498 2.0e-96 357.1 449 46.1
BolC5t31810H Brassica oleracea HOM05D003649 ORTHO05D004498 9.3e-94 348.2 348 55.5
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 6.0e-93 345.5 286 62.9
A07p11220 Brassica napus HOM05D003649 ORTHO05D004498 3.3e-91 339.7 407 47.9
BcaC06g35364 Brassica carinata HOM05D003649 ORTHO05D004498 4.3e-91 339.3 401 48.1
A07p08470 Brassica napus HOM05D003649 ORTHO05D004498 1.8e-89 334.0 405 48.1
PRCOL_00003636 Prasinoderma coloniale HOM05D003649 ORTHO05D004498 3.1e-89 333.2 373 48.3
BraA07t28915Z Brassica rapa HOM05D003649 ORTHO05D004498 2.9e-87 326.6 401 46.4
Cre01.g063267 Chlamydomonas reinhardtii HOM05D003649 ORTHO05D004498 2.9e-87 326.6 477 43.0
Thhalv10028678m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 8.4e-87 325.1 409 46.2
C07p16930 Brassica napus HOM05D003649 ORTHO05D004498 1.3e-84 317.8 424 45.5
C07p13190 Brassica napus HOM05D003649 ORTHO05D004498 1.2e-80 304.7 370 47.3
BolC7t41812H Brassica oleracea HOM05D003649 ORTHO05D004498 1.5e-80 304.3 370 47.3
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 8.4e-79 298.5 270 61.5
BolC7t42199H Brassica oleracea HOM05D003649 ORTHO05D004498 3.5e-77 293.1 349 47.9
BcaC06g35591 Brassica carinata HOM05D003649 ORTHO05D004498 1.8e-76 290.8 358 46.6
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 3.1e-73 280.0 207 69.1
RcHm_v2.0_Chr6g0291881 Rosa chinensis HOM05D003649 ORTHO05D004498 1.3e-71 274.6 374 43.9
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 3.3e-59 233.4 169 73.4
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 5.7e-59 232.6 168 73.2
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 2.2e-55 220.7 452 33.6
Pp3c1_22730 Physcomitrium patens HOM05D003649 ORTHO05D004498 1.6e-53 214.5 153 68.6
SEGI_32462 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 1.1e-49 201.8 125 76.0
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea HOM05D003649 ORTHO05D004498 1.4e-46 191.4 200 50.5
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 2.6e-43 180.6 142 69.0
SEGI_37931 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 4.7e-37 159.8 94 79.8
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea HOM05D003649 ORTHO05D004498 8.2e-34 149.1 166 49.4
Actinidia13653 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.1e-30 138.7 133 57.9
AL6G50590 Arabidopsis lyrata HOM05D003649 ORTHO05D004498 1.4e-28 131.7 142 47.9
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea HOM05D003649 ORTHO05D004498 4.4e-27 126.7 119 53.8
RhsimUnG0127900 Rhododendron simsii HOM05D003649 ORTHO05D004498 2.2e-23 114.4 84 66.7
BolC9t56391H Brassica oleracea HOM05D003649 ORTHO05D004498 8.5e-23 112.5 98 54.1
A09p28020 Brassica napus HOM05D003649 ORTHO05D004498 2.5e-22 110.9 94 58.5
C09p35520 Brassica napus HOM05D003649 ORTHO05D004498 7.2e-22 109.4 94 55.3
BraA07t28632Z Brassica rapa HOM05D003649 ORTHO05D004498 2.7e-21 107.5 101 53.5
DCAR_030783 Daucus carota HOM05D003649 ORTHO05D004498 5.7e-19 99.8 148 48.6
BcaC05g27926 Brassica carinata HOM05D003649 ORTHO05D004498 2.8e-18 97.4 168 37.5
SGA_v2.0_scaffold30G12442 Striga asiatica HOM05D003649 ORTHO05D004498 1.2e-16 92.0 145 42.8
C07p16950 Brassica napus HOM05D003649 ORTHO05D027520 2.0e-16 91.3 197 32.5
DCAR_030782 Daucus carota HOM05D003649 ORTHO05D004498 1.5e-14 85.1 61 72.1
BolC7t42195H Brassica oleracea HOM05D003649 ORTHO05D040526 2.6e-11 74.3 97 44.3
SGA_v2.0_scaffold24G10283 Striga asiatica HOM05D003649 ORTHO05D031702 4.4e-11 73.6 49 67.3
BcaC04g21367 Brassica carinata HOM05D001554 ORTHO05D001481 5.7e-11 73.2 54 57.4
C09p32650 Brassica napus HOM05D003649 ORTHO05D004498 5.7e-11 73.2 54 57.4
Thecc.09G274800 Theobroma cacao HOM05D003649 ORTHO05D004498 3.7e-10 70.5 72 59.7
SEGI_11889 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 4.1e-09 67.0 136 37.5
MBI19_g34544_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 5.9e-08 63.2 39 74.4
C09p35530 Brassica napus HOM05D003649 ORTHO05D004498 1.7e-07 61.6 191 30.4
BolC7t42200H Brassica oleracea HOM05D003649 ORTHO05D027520 6.6e-07 59.7 89 37.1
Atru.chr3.2263 Acer truncatum HOM05D003649 ORTHO05D004498 3.3e-06 57.4 67 58.2
C07p16900 Brassica napus HOM05D003649 ORTHO05D040526 3.3e-06 57.4 86 41.9
Atru.chr3.2269 Acer truncatum HOM05D003649 ORTHO05D004498 7.3e-06 56.2 67 56.7


User provided reference genes

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