Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 4.2e-147 524.6 255 100.0
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 4.6e-138 494.6 303 82.8
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 6.7e-105 384.4 303 63.0
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 8.2e-103 377.5 303 61.7
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 2.1e-98 362.8 302 59.9
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 5.2e-97 358.2 254 67.7
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 8.8e-97 357.5 302 58.3
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 1.1e-96 357.1 303 58.4
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 7.4e-96 354.4 302 57.9
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 2.2e-95 352.8 293 59.7
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.8e-95 352.4 303 58.4
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 2.8e-95 352.4 302 57.9
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 6.3e-95 351.3 296 58.8
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 8.2e-95 350.9 302 58.3
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 1.8e-94 349.7 303 58.1
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 1.8e-94 349.7 302 57.0
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 3.1e-94 349.0 302 57.6
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 3.1e-94 349.0 302 58.3
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 4.1e-94 348.6 302 57.0
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 5.3e-94 348.2 303 57.4
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 5.3e-94 348.2 303 58.1
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 5.3e-94 348.2 300 57.7
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 5.3e-94 348.2 271 64.9
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 7.0e-94 347.8 308 57.1
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 1.2e-93 347.1 303 56.4
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 2.0e-93 346.3 248 63.3
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.0e-93 346.3 308 57.5
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 2.0e-93 346.3 302 57.0
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 4.5e-93 345.1 283 61.8
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 7.7e-93 344.4 301 58.5
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 7.7e-93 344.4 308 57.1
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 7.7e-93 344.4 302 57.6
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 7.7e-93 344.4 294 58.5
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 7.7e-93 344.4 302 57.3
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 7.7e-93 344.4 300 56.3
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 1.0e-92 344.0 302 57.3
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 1.7e-92 343.2 296 57.4
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 1.7e-92 343.2 302 56.3
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 2.2e-92 342.8 259 63.3
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 2.2e-92 342.8 302 57.0
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 2.2e-92 342.8 302 56.0
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 2.9e-92 342.4 302 55.3
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 3.8e-92 342.0 316 56.0
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 3.8e-92 342.0 303 56.4
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 8.5e-92 340.9 302 56.6
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 8.5e-92 340.9 300 57.0
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 8.5e-92 340.9 305 55.1
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 1.1e-91 340.5 303 55.8
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 1.9e-91 339.7 304 55.6
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 3.2e-91 339.0 303 57.1
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 4.2e-91 338.6 302 56.3
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 5.5e-91 338.2 295 55.9
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 9.4e-91 337.4 302 57.0
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 9.4e-91 337.4 302 55.6
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 1.2e-90 337.0 301 56.5
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 1.6e-90 336.7 303 56.8
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 4.7e-90 335.1 302 54.6
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 8.0e-90 334.3 296 56.8
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.4e-89 333.6 303 56.4
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 2.3e-89 332.8 297 55.9
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 2.3e-89 332.8 309 55.0
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 6.8e-89 331.3 303 54.5
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 6.8e-89 331.3 302 55.3
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 6.8e-89 331.3 302 54.6
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 8.8e-89 330.9 234 67.1
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 1.2e-88 330.5 303 56.4
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 1.5e-88 330.1 278 59.0
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 1.5e-88 330.1 290 57.2
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 2.0e-88 329.7 334 51.8
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 2.6e-88 329.3 303 53.5
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 7.5e-88 327.8 302 54.6
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 9.7e-88 327.4 332 53.3
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 1.3e-87 327.0 303 55.4
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 2.2e-87 326.2 300 56.0
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 1.1e-86 323.9 300 55.3
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 1.1e-86 323.9 300 55.3
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 1.4e-86 323.6 300 55.3
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.4e-86 323.6 228 65.8
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 3.1e-86 322.4 303 54.8
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 5.3e-86 321.6 333 51.1
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 1.6e-85 320.1 304 53.9
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 3.5e-85 318.9 301 54.8
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 1.3e-84 317.0 287 55.4
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 2.9e-84 315.8 302 52.3
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.1e-83 313.9 323 51.1
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 4.2e-83 312.0 273 56.0
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 7.2e-83 311.2 300 54.3
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 1.6e-82 310.1 302 52.6
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 8.0e-82 307.8 302 52.6
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 1.4e-81 307.0 302 52.3
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 1.5e-80 303.5 302 52.3
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 1.5e-80 303.5 361 47.1
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 4.4e-80 302.0 302 51.7
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 8.3e-79 297.7 342 47.4
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 4.5e-77 292.0 302 51.3
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 5.9e-77 291.6 283 54.4
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 1.7e-76 290.0 280 54.3
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 7.2e-75 284.6 280 53.6
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 6.1e-74 281.6 202 66.8
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.2e-72 277.3 166 78.3
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 5.7e-72 275.0 202 63.4
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 4.9e-71 271.9 192 69.8
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 1.1e-70 270.8 304 48.0
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 3.9e-68 262.3 208 59.6
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 3.5e-61 239.2 298 45.3
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 3.5e-61 239.2 299 45.2
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 1.6e-58 230.3 290 44.8
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 1.7e-55 220.3 307 42.0
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 4.9e-55 218.8 254 47.2
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 1.1e-54 217.6 297 41.1
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 6.0e-53 211.8 215 50.7
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 1.0e-52 211.1 191 55.0
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 3.2e-46 189.5 188 53.7
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 4.7e-42 175.6 193 47.2
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 5.2e-41 172.2 214 43.5
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 5.4e-38 162.2 131 61.1
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 7.1e-38 161.8 194 44.8
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 1.2e-37 161.0 191 45.0
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 3.3e-35 152.9 335 32.8
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 4.8e-34 149.1 225 38.2
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 6.6e-28 128.6 170 38.8
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 1.6e-26 124.0 148 44.6
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 3.6e-26 122.9 85 63.5
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 4.0e-25 119.4 195 39.5
TPR.G753 Trifolium pratense HOM05D005792 ORTHO05D007171 1.2e-24 117.9 93 61.3
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 3.4e-24 116.3 164 40.9
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 2.2e-23 113.6 83 62.7
HPP92_014386 Vanilla planifolia HOM05D005792 ORTHO05D007171 1.8e-20 104.0 93 52.7
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 3.3e-19 99.8 85 60.0
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.2e-16 91.3 56 73.2
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 4.6e-13 79.3 77 51.9
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 6.7e-12 75.5 130 36.9
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 1.1e-09 68.2 56 53.6
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 1.2e-08 64.7 67 49.3
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 2.5e-06 57.0 42 59.5


User provided reference genes

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