Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2716 Papaver somniferum HOM05D006454 ORTHO05D008024 8.4e-195 684.1 525 100.0
PSO541G2941 Papaver somniferum HOM05D006454 ORTHO05D008024 1.4e-184 650.2 525 96.4
TAR626G0559 Trochodendron aralioides HOM05D006454 ORTHO05D008024 4.8e-89 332.8 536 62.3
ClCG09G021120 Citrullus lanatus HOM05D006454 ORTHO05D008024 1.1e-85 321.6 491 67.2
Aqoxy4G02215 Aquilegia oxysepala HOM05D006454 ORTHO05D008024 3.2e-85 320.1 498 66.1
MBI16_g11566_MAGBIO Magnolia biondii HOM05D006454 ORTHO05D008024 4.6e-84 316.2 517 61.3
MELO3C024909.2 Cucumis melo HOM05D006454 ORTHO05D008024 6.0e-84 315.8 493 61.1
CsaV3_7G018450 Cucumis sativus L. HOM05D006454 ORTHO05D008024 6.0e-84 315.8 519 64.4
FAN21G2064 Fragaria x ananassa HOM05D006454 ORTHO05D008024 1.0e-83 315.1 517 60.3
MD11G1204700 Malus domestica HOM05D006454 ORTHO05D008024 3.9e-83 313.2 518 60.8
Gorai.013G155100 Gossypium raimondii HOM05D006454 ORTHO05D008024 1.1e-82 311.6 528 61.2
CANSAT11G2145 Cannabis sativa HOM05D006454 ORTHO05D008024 1.5e-82 311.2 482 64.9
MD03G1188700 Malus domestica HOM05D006454 ORTHO05D008024 2.5e-82 310.5 492 65.7
Haze_09788 Corylus avellana HOM05D006454 ORTHO05D008024 5.7e-82 309.3 482 63.3
FAN25G3289 Fragaria x ananassa HOM05D006454 ORTHO05D008024 9.6e-82 308.5 518 59.8
Gohir.D13G138500 Gossypium hirsutum HOM05D006454 ORTHO05D008024 9.6e-82 308.5 528 61.2
FvH4_3g24060 Fragaria vesca HOM05D006454 ORTHO05D008024 1.6e-81 307.8 516 59.5
FAN11G0689 Fragaria x ananassa HOM05D006454 ORTHO05D008024 1.6e-81 307.8 516 59.5
QL08p005504 Quercus lobata HOM05D006454 ORTHO05D008024 2.1e-81 307.4 542 56.3
Cfa020229 Carpinus fangiana HOM05D006454 ORTHO05D008024 2.8e-81 307.0 482 62.7
FAN25G1123 Fragaria x ananassa HOM05D006454 ORTHO05D008024 2.8e-81 307.0 517 59.6
Gohir.A13G134866 Gossypium hirsutum HOM05D006454 ORTHO05D008024 8.2e-81 305.4 528 60.8
RcHm_v2.0_Chr5g0042641 Rosa chinensis HOM05D006454 ORTHO05D008024 1.8e-80 304.3 496 60.5
Atru.chr2.3605 Acer truncatum HOM05D006454 ORTHO05D008024 1.2e-79 301.6 505 64.2
THA.LOC104813444 Tarenaya hassleriana HOM05D006454 ORTHO05D008024 1.7e-78 297.7 488 63.9
Sed0021870 Sechium edule HOM05D006454 ORTHO05D008024 5.0e-78 296.2 504 62.1
Carub.0008s1595 Capsella rubella HOM05D006454 ORTHO05D008024 6.5e-78 295.8 477 61.4
Ciclev10008511m.g Citrus clementina HOM05D006454 ORTHO05D008024 1.9e-77 294.3 491 64.2
Thecc.07G022300 Theobroma cacao HOM05D006454 ORTHO05D008024 3.2e-77 293.5 499 60.1
DCAR_013215 Daucus carota HOM05D006454 ORTHO05D008024 7.2e-77 292.4 474 64.3
Sabra11G0073300 Salix brachista HOM05D006454 ORTHO05D008024 1.2e-76 291.6 475 65.3
Potri.001G361800 Populus trichocarpa HOM05D006454 ORTHO05D008024 1.6e-76 291.2 497 63.4
C03p16380 Brassica napus HOM05D006454 ORTHO05D008024 6.1e-76 289.3 492 60.6
Aa31LG3G11530 Aethionema arabicum HOM05D006454 ORTHO05D008024 7.9e-76 288.9 482 60.4
Sp6g17500 Schrenkiella parvula HOM05D006454 ORTHO05D008024 7.9e-76 288.9 473 61.1
BcaB01g04358 Brassica carinata HOM05D006454 ORTHO05D008024 1.0e-75 288.5 491 60.9
Prupe.4G234400 Prunus persica HOM05D006454 ORTHO05D008024 1.3e-75 288.1 496 59.3
BcaC01g06383 Brassica carinata HOM05D006454 ORTHO05D008024 2.3e-75 287.3 492 60.4
BolC3t14060H Brassica oleracea HOM05D006454 ORTHO05D008024 3.0e-75 287.0 491 61.1
Eucgr.F03524 Eucalyptus grandis HOM05D006454 ORTHO05D008024 3.9e-75 286.6 472 67.4
Sabra11G0078800 Salix brachista HOM05D006454 ORTHO05D008024 6.7e-75 285.8 480 64.8
A03p13940 Brassica napus HOM05D006454 ORTHO05D008024 5.7e-74 282.7 492 61.0
BraA03t10695Z Brassica rapa HOM05D006454 ORTHO05D008024 5.7e-74 282.7 481 62.0
AL8G31150 Arabidopsis lyrata HOM05D006454 ORTHO05D008024 7.4e-74 282.3 475 61.1
Glyma.14G015800 Glycine max HOM05D006454 ORTHO05D008024 7.4e-74 282.3 474 65.6
Lsat_1_v5_gn_5_8060 Lactuca sativa HOM05D006454 ORTHO05D008024 1.3e-73 281.6 478 63.2
Actinidia05032 Actinidia chinensis HOM05D006454 ORTHO05D008024 1.6e-73 281.2 483 62.1
LjContig00272g0005215 Lotus japonicus HOM05D006454 ORTHO05D008024 2.2e-73 280.8 474 62.9
Thhalv10013311m.g Eutrema salsugineum HOM05D006454 ORTHO05D008024 3.7e-73 280.0 474 51.3
Nitab4.5_0002517g0040 Nicotiana tabacum HOM05D006454 ORTHO05D008024 3.7e-73 280.0 477 64.8
ECA246G2030 Erigeron canadensis HOM05D006454 ORTHO05D008024 6.3e-73 279.3 469 55.9
Migut.M01675 Erythranthe guttata HOM05D006454 ORTHO05D008024 1.1e-72 278.5 476 55.3
CiPaw.11G201000 Carya illinoinensis HOM05D006454 ORTHO05D008024 1.8e-72 277.7 386 71.5
Phvul.008G275700 Phaseolus vulgaris HOM05D006454 ORTHO05D008024 2.4e-72 277.3 475 62.7
MSTRG.6985 Avicennia marina HOM05D006454 ORTHO05D008024 4.1e-72 276.6 495 60.4
Manes.15G063200 Manihot esculenta HOM05D006454 ORTHO05D008024 4.1e-72 276.6 489 61.8
VMungo0647G1066 Vigna mungo HOM05D006454 ORTHO05D008024 1.5e-71 274.6 474 65.4
Glyma.02G297900 Glycine max HOM05D006454 ORTHO05D008024 4.5e-71 273.1 476 65.3
AT5G55580 Arabidopsis thaliana HOM05D006454 ORTHO05D008024 5.9e-71 272.7 477 61.4
arahy.Tifrunner.gnm1.ann1.AYWF3K Arachis hypogaea HOM05D006454 ORTHO05D008024 3.8e-70 270.0 468 63.7
CSS0002313 Camellia sinensis var. sinensis HOM05D006454 ORTHO05D000036 8.5e-70 268.9 337 71.2
HanXRQChr08g0235811 Helianthus annuus HOM05D006454 ORTHO05D008024 1.4e-69 268.1 485 57.9
Cc05_g14700 Coffea canephora HOM05D006454 ORTHO05D008024 3.2e-69 266.9 480 60.0
Nitab4.5_0000163g0310 Nicotiana tabacum HOM05D006454 ORTHO05D008024 3.2e-69 266.9 478 59.0
TWI39G0040 Tripterygium wilfordii HOM05D006454 ORTHO05D008024 4.2e-69 266.5 478 61.3
Medtr5g094610 Medicago truncatula HOM05D006454 ORTHO05D008024 1.2e-68 265.0 472 60.8
AUR62040658 Chenopodium quinoa HOM05D006454 ORTHO05D008024 1.6e-68 264.6 473 59.6
CDE12G0728 Ceratophyllum demersum HOM05D006454 ORTHO05D008024 7.9e-68 262.3 485 61.6
arahy.Tifrunner.gnm1.ann1.IBL7LR Arachis hypogaea HOM05D006454 ORTHO05D008024 1.0e-67 261.9 474 62.4
SalBow8G0989 Salvia bowleyana HOM05D006454 ORTHO05D008024 1.0e-67 261.9 496 55.8
TPR.G14154 Trifolium pratense HOM05D006454 ORTHO05D008024 1.0e-67 261.9 474 60.5
Lalb_Chr04g0247971 Lupinus albus HOM05D006454 ORTHO05D008024 1.8e-67 261.2 471 58.0
ATR1149G086 Amborella trichopoda HOM05D006454 ORTHO05D008024 2.3e-67 260.8 477 56.0
CARHR268890 Cardamine hirsuta HOM05D006454 ORTHO05D008024 2.3e-67 260.8 359 72.1
vmacro11560 Vaccinium macrocarpon HOM05D006454 ORTHO05D008024 3.0e-67 260.4 373 71.0
Oeu054328.1 Olea europaea HOM05D006454 ORTHO05D008024 3.9e-67 260.0 529 57.5
Solyc12g015640.2 Solanum lycopersicum HOM05D006454 ORTHO05D008024 3.9e-67 260.0 493 57.0
AUR62017060 Chenopodium quinoa HOM05D006454 ORTHO05D008024 6.7e-67 259.2 470 61.3
Peaxi162Scf00955g00214 Petunia axillaris HOM05D006454 ORTHO05D008024 1.8e-64 251.1 475 58.1
EL10Ac4g07613 Beta vulgaris HOM05D006454 ORTHO05D008024 5.3e-64 249.6 338 77.5
Lj1A885G30 Lonicera japonica HOM05D006454 ORTHO05D008024 9.1e-64 248.8 375 65.9
CiPaw.12G136000 Carya illinoinensis HOM05D006454 ORTHO05D008024 2.6e-63 247.3 513 50.7
Ca_06374_v3 Cicer arietinum L. HOM05D006454 ORTHO05D000136 4.5e-63 246.5 360 68.3
Sopen12g007540 Solanum pennellii HOM05D006454 ORTHO05D008024 7.7e-63 245.7 471 60.1
GSVIVG01037780001 Vitis vinifera HOM05D006454 ORTHO05D008024 6.5e-62 242.7 435 62.5
Ah.04g166440 Amaranthus hybridus HOM05D006454 ORTHO05D008024 1.6e-60 238.0 470 62.3
SGA_v2.0_scaffold171G38887 Striga asiatica HOM05D006454 ORTHO05D008024 2.7e-60 237.3 482 57.7
PGR031G1939 Punica granatum HOM05D006454 ORTHO05D008024 6.1e-60 236.1 516 55.6
Psat2g008800 Pisum sativum HOM05D006454 ORTHO05D008024 1.0e-59 235.3 473 60.3
CAN.G1239.14 Capsicum annuum HOM05D006454 ORTHO05D008024 1.8e-59 234.6 482 54.6
HPP92_007883 Vanilla planifolia HOM05D006454 ORTHO05D008024 2.6e-58 230.7 490 59.8
Rhsim06G0226800 Rhododendron simsii HOM05D006454 ORTHO05D008024 4.8e-57 226.5 501 49.9
Dinv40835 Davidia involucrata HOM05D006454 ORTHO05D008024 4.2e-53 213.4 292 74.7
Actinidia00093 Actinidia chinensis HOM05D006454 ORTHO05D008024 4.0e-51 206.8 405 62.0
COL.COLO4_09787 Corchorus olitorius HOM05D006454 ORTHO05D008024 9.1e-48 195.7 481 55.7
Sc16g0003560 Simmondsia chinensis HOM05D006454 ORTHO05D008024 7.2e-45 186.0 363 58.1
PGSC0003DMG401029813 Solanum tuberosum HOM05D006454 ORTHO05D008024 8.0e-44 182.6 292 73.6
HPP92_007898 Vanilla planifolia HOM05D006454 ORTHO05D008024 4.0e-43 180.3 290 81.4
Oeu031063.1 Olea europaea HOM05D006454 ORTHO05D008024 1.5e-42 178.3 292 77.1
Zm00001eb107900 Zea mays HOM05D006454 ORTHO05D008024 4.4e-42 176.8 477 56.2
Cpa.g.sc12.193 Carica papaya HOM05D006454 ORTHO05D008024 1.7e-41 174.9 239 46.4
Os07g0583200 Oryza sativa ssp. japonica HOM05D006454 ORTHO05D008024 1.7e-41 174.9 353 65.7
Hund01917 Selenicereus undatus HOM05D006454 ORTHO05D008024 1.7e-41 174.9 333 63.7
CAN.G489.2 Capsicum annuum HOM05D006454 ORTHO05D008024 1.4e-40 171.8 303 53.5
Prupe.4G234100 Prunus persica HOM05D006454 ORTHO05D008024 8.0e-36 156.0 136 82.4
BcaNung06723 Brassica carinata HOM05D000081 ORTHO05D008024 1.5e-29 135.2 333 41.4
unitig_899.g15274 Utricularia gibba HOM05D006454 ORTHO05D008024 2.8e-28 131.0 94 69.1
Hund01916 Selenicereus undatus HOM05D006454 ORTHO05D008024 4.0e-27 127.1 489 25.6
BolC2t07758H Brassica oleracea HOM05D006454 ORTHO05D008024 2.7e-23 114.4 155 43.9
Nn1g07440 Nelumbo nucifera HOM05D006454 ORTHO05D008024 5.6e-21 106.7 519 29.3
Cpa.g.sc12.192 Carica papaya HOM05D006454 ORTHO05D008024 2.3e-19 101.3 92 70.7
SEGI_11937 Sequoiadendron giganteum HOM05D047912 ORTHO05D008024 1.7e-17 95.1 334 54.8
Pp3c7_3780 Physcomitrium patens HOM05D006454 ORTHO05D008024 7.0e-16 89.7 375 53.6
Mapoly0042s0040 Marchantia polymorpha HOM05D006454 ORTHO05D008024 4.6e-15 87.0 334 50.3
BcaNung06724 Brassica carinata HOM05D006454 ORTHO05D008024 6.0e-15 86.7 54 72.2
Pp3c11_22990 Physcomitrium patens HOM05D006454 ORTHO05D008024 8.6e-14 82.8 84 48.8
vmacro10144 Vaccinium macrocarpon HOM05D006454 ORTHO05D008024 3.3e-13 80.9 288 27.4
AagrBONN_evm.TU.Sc2ySwM_117.1902 Anthoceros agrestis HOM05D006454 ORTHO05D008024 3.7e-09 67.4 298 25.5


User provided reference genes

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