Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2634 Papaver somniferum HOM05D003755 ORTHO05D004385 1.7e-191 672.5 348 100.0
PSO541G6483 Papaver somniferum HOM05D003755 ORTHO05D004385 5.4e-190 667.5 348 99.1
TAR626G0320 Trochodendron aralioides HOM05D003755 ORTHO05D004385 3.7e-146 521.9 348 75.0
Aqoxy4G01977 Aquilegia oxysepala HOM05D003755 ORTHO05D004385 1.4e-140 503.4 336 75.9
TAR624G0284 Trochodendron aralioides HOM05D003755 ORTHO05D004385 1.2e-136 490.3 348 71.8
Nn1g07049 Nelumbo nucifera HOM05D003755 ORTHO05D004385 3.7e-130 468.8 342 70.5
MBI18_g01410_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.0e-124 450.7 343 67.1
Dinv17826 Davidia involucrata HOM05D003755 ORTHO05D004385 1.2e-123 447.2 325 71.1
TWI38G1222 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.0e-123 446.4 339 67.0
TWI38G1592 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 2.0e-123 446.4 338 66.9
CANSAT56G3751 Cannabis sativa HOM05D003755 ORTHO05D004385 9.8e-123 444.1 339 68.4
Eucgr.E04113 Eucalyptus grandis HOM05D003755 ORTHO05D004385 1.3e-122 443.7 317 71.0
Manes.16G011500 Manihot esculenta HOM05D003755 ORTHO05D004385 1.3e-122 443.7 351 66.4
CsaV3_6G049210 Cucumis sativus L. HOM05D003755 ORTHO05D004385 2.2e-122 443.0 342 67.8
PGR004G2273 Punica granatum HOM05D003755 ORTHO05D004385 4.8e-122 441.8 346 65.3
MELO3C007374.2 Cucumis melo HOM05D003755 ORTHO05D004385 1.4e-121 440.3 342 67.8
CiPaw.09G088000 Carya illinoinensis HOM05D003755 ORTHO05D004385 2.4e-121 439.5 341 67.4
ATR0109G031 Amborella trichopoda HOM05D003755 ORTHO05D004385 4.1e-121 438.7 344 63.4
Cpa.g.sc198.13 Carica papaya HOM05D003755 ORTHO05D004385 9.1e-121 437.6 352 66.5
Hma1.2p1_0091F.1_g046190 Hydrangea macrophylla HOM05D003755 ORTHO05D004385 9.1e-121 437.6 342 68.1
ClCG01G022150 Citrullus lanatus HOM05D003755 ORTHO05D004385 3.5e-120 435.6 343 67.1
Duzib160G0429 Durio zibethinus HOM05D003755 ORTHO05D004385 3.5e-120 435.6 339 65.8
Thecc.06G215100 Theobroma cacao HOM05D003755 ORTHO05D004385 3.5e-120 435.6 338 65.4
Gohir.A06G145950 Gossypium hirsutum HOM05D003755 ORTHO05D004385 3.8e-119 432.2 340 65.9
Potri.011G025700 Populus trichocarpa HOM05D003755 ORTHO05D004385 1.1e-118 430.6 355 64.8
Sabra11G0016200 Salix brachista HOM05D003755 ORTHO05D004385 1.9e-118 429.9 353 65.2
Sabra11G0021900 Salix brachista HOM05D003755 ORTHO05D004385 1.9e-118 429.9 353 65.2
Ciclev10015811m.g Citrus clementina HOM05D003755 ORTHO05D004385 2.5e-118 429.5 341 64.2
CDE05G0706 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 4.2e-118 428.7 319 66.5
QL05p074736 Quercus lobata HOM05D003755 ORTHO05D004385 4.2e-118 428.7 340 66.2
Duzib192G0935 Durio zibethinus HOM05D003755 ORTHO05D004385 5.5e-118 428.3 338 64.2
Prupe.4G025400 Prunus persica HOM05D003755 ORTHO05D004385 1.2e-117 427.2 346 64.7
VMungo0720G2911 Vigna mungo HOM05D003755 ORTHO05D004385 1.6e-117 426.8 343 67.1
Phvul.007G053000 Phaseolus vulgaris HOM05D003755 ORTHO05D004385 8.0e-117 424.5 317 70.3
Glyma.10G251600 Glycine max HOM05D003755 ORTHO05D004385 1.0e-116 424.1 341 67.4
Ca_10975_v3 Cicer arietinum L. HOM05D003755 ORTHO05D004385 1.4e-116 423.7 335 68.1
ECA234G3589 Erigeron canadensis HOM05D003755 ORTHO05D004385 1.8e-116 423.3 343 64.7
Sc05g0008910 Simmondsia chinensis HOM05D003755 ORTHO05D004385 5.2e-116 421.8 337 64.7
Glyma.20G141900 Glycine max HOM05D003755 ORTHO05D004385 1.5e-115 420.2 338 66.9
AUR62012654 Chenopodium quinoa HOM05D003755 ORTHO05D004385 2.0e-115 419.9 338 63.6
Cfa000266 Carpinus fangiana HOM05D003755 ORTHO05D004385 4.4e-115 418.7 338 66.6
Medtr1g105470 Medicago truncatula HOM05D003755 ORTHO05D004385 6.3e-114 414.8 341 65.1
FvH4_3g02600 Fragaria vesca HOM05D003755 ORTHO05D004385 8.3e-114 414.5 344 65.4
CSS0014334 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 1.8e-113 413.3 315 69.8
Atru.chr10.2154 Acer truncatum HOM05D003755 ORTHO05D004385 4.1e-113 412.1 365 60.5
Psat6g210560 Pisum sativum HOM05D003755 ORTHO05D004385 1.6e-112 410.2 340 63.8
Gohir.D05G171400 Gossypium hirsutum HOM05D003755 ORTHO05D004385 2.7e-112 409.5 337 62.0
Lsat_1_v5_gn_4_58721 Lactuca sativa HOM05D003755 ORTHO05D004385 2.7e-112 409.5 340 64.4
MD00G1180300 Malus domestica HOM05D003755 ORTHO05D004385 2.7e-112 409.5 345 62.0
Aa31LG2G9060 Aethionema arabicum HOM05D003755 ORTHO05D004385 3.5e-112 409.1 345 61.4
FAN21G0915 Fragaria x ananassa HOM05D003755 ORTHO05D004385 5.9e-112 408.3 346 63.3
AL2G14320 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 7.7e-112 407.9 345 61.2
Carub.0002s0327 Capsella rubella HOM05D003755 ORTHO05D004385 7.7e-112 407.9 345 61.4
CARHR050550 Cardamine hirsuta HOM05D003755 ORTHO05D004385 1.3e-111 407.1 340 61.5
Lalb_Chr21g0307811 Lupinus albus HOM05D003755 ORTHO05D004385 1.7e-111 406.8 339 65.2
Sp2g02750 Schrenkiella parvula HOM05D003755 ORTHO05D004385 2.9e-111 406.0 339 61.7
Thhalv10023566m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 3.8e-111 405.6 339 61.4
AT1G61790 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 8.6e-111 404.4 345 61.2
CSS0017235 Camellia sinensis var. sinensis HOM05D003755 ORTHO05D004385 3.3e-110 402.5 314 67.8
THA.LOC104823520 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 1.2e-109 400.6 341 60.4
CDE11G0393 Ceratophyllum demersum HOM05D003755 ORTHO05D004385 2.1e-109 399.8 333 61.9
Lj5g0019176 Lotus japonicus HOM05D003755 ORTHO05D004385 2.1e-109 399.8 339 62.8
COL.COLO4_31737 Corchorus olitorius HOM05D003755 ORTHO05D004385 4.7e-109 398.7 338 61.2
Gohir.A05G168300 Gossypium hirsutum HOM05D003755 ORTHO05D004385 4.7e-109 398.7 337 60.5
Migut.H01555 Erythranthe guttata HOM05D003755 ORTHO05D004385 6.1e-109 398.3 319 65.2
Cc02_g11630 Coffea canephora HOM05D003755 ORTHO05D004385 8.0e-109 397.9 338 62.4
THA.LOC104809515 Tarenaya hassleriana HOM05D003755 ORTHO05D004385 1.0e-108 397.5 339 61.1
Ah.09g235250 Amaranthus hybridus HOM05D003755 ORTHO05D004385 5.2e-108 395.2 340 61.2
BcaC06g31863 Brassica carinata HOM05D003755 ORTHO05D004385 5.2e-108 395.2 344 61.3
Atru.chr10.2153 Acer truncatum HOM05D003755 ORTHO05D004385 6.8e-108 394.8 357 60.5
EL10Ac8g19999 Beta vulgaris HOM05D003755 ORTHO05D004385 8.9e-108 394.4 334 63.2
Solyc03g031790.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.6e-107 392.9 349 61.3
FAN25G0829 Fragaria x ananassa HOM05D003755 ORTHO05D004385 9.8e-107 391.0 340 63.8
MSTRG.14647 Avicennia marina HOM05D003755 ORTHO05D004385 2.2e-106 389.8 347 61.1
Oeu016525.1 Olea europaea HOM05D003755 ORTHO05D004385 3.7e-106 389.0 341 61.0
BcaB04g20374 Brassica carinata HOM05D003755 ORTHO05D004385 6.4e-106 388.3 343 59.5
Sed0012988 Sechium edule HOM05D003755 ORTHO05D004385 6.4e-106 388.3 341 60.1
C01p39060 Brassica napus HOM05D003755 ORTHO05D004385 8.3e-106 387.9 339 59.9
BolC1t03856H Brassica oleracea HOM05D003755 ORTHO05D004385 8.3e-106 387.9 339 59.9
BcaC02g10535 Brassica carinata HOM05D003755 ORTHO05D004385 1.1e-105 387.5 313 63.6
C04p27760 Brassica napus HOM05D003755 ORTHO05D004385 1.1e-105 387.5 313 63.6
BolC4t24319H Brassica oleracea HOM05D003755 ORTHO05D004385 1.1e-105 387.5 313 63.6
Manes.17G035900 Manihot esculenta HOM05D003755 ORTHO05D004385 1.4e-105 387.1 339 60.2
Sopen03g005650 Solanum pennellii HOM05D003755 ORTHO05D004385 1.4e-105 387.1 349 60.7
PGSC0003DMG400024071 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.8e-105 386.7 349 59.9
BraA01t03198Z Brassica rapa HOM05D003755 ORTHO05D004385 3.2e-105 386.0 339 59.9
A01p30670 Brassica napus HOM05D003755 ORTHO05D004385 4.1e-105 385.6 339 59.9
A01p30690 Brassica napus HOM05D003755 ORTHO05D004385 4.1e-105 385.6 339 59.9
MD10G1315200 Malus domestica HOM05D003755 ORTHO05D004385 2.0e-104 383.3 337 62.3
DCAR_028162 Daucus carota HOM05D003755 ORTHO05D004385 2.7e-104 382.9 340 62.4
Dinv20022 Davidia involucrata HOM05D003755 ORTHO05D004385 3.5e-104 382.5 308 66.6
SEGI_11297 Sequoiadendron giganteum HOM05D003755 ORTHO05D004385 3.3e-102 375.9 314 61.8
unitig_26.g9395 Utricularia gibba HOM05D003755 ORTHO05D004385 7.3e-102 374.8 336 58.3
Os03g0565100 Oryza sativa ssp. japonica HOM05D003755 ORTHO05D004385 3.1e-100 369.4 342 55.8
Gohir.D09G069500 Gossypium hirsutum HOM05D003755 ORTHO05D004385 6.8e-100 368.2 340 55.6
Gorai.006G083700 Gossypium raimondii HOM05D003755 ORTHO05D004385 6.8e-100 368.2 340 55.6
Gorai.010G177400 Gossypium raimondii HOM05D003755 ORTHO05D004385 3.2e-97 359.4 340 58.8
Rhsim13G0157400 Rhododendron simsii HOM05D003755 ORTHO05D004385 5.4e-97 358.6 269 68.8
Zm00001eb043070 Zea mays HOM05D003755 ORTHO05D004385 2.0e-96 356.7 325 56.9
Nitab4.5_0000091g0500 Nicotiana tabacum HOM05D003755 ORTHO05D004385 2.7e-96 356.3 328 57.6
Lj2A272T65 Lonicera japonica HOM05D003755 ORTHO05D004385 2.1e-93 346.7 352 56.8
AL1G22670 Arabidopsis lyrata HOM05D003755 ORTHO05D004385 2.3e-92 343.2 329 54.4
Nitab4.5_0005793g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 8.9e-92 341.3 343 53.9
Thhalv10008090m.g Eutrema salsugineum HOM05D003755 ORTHO05D004385 2.0e-91 340.1 338 55.6
AT1G11560 Arabidopsis thaliana HOM05D003755 ORTHO05D004385 2.6e-91 339.7 336 53.3
CARHR011840 Cardamine hirsuta HOM05D003755 ORTHO05D004385 4.4e-91 339.0 325 54.5
Lalb_Chr06g0164871 Lupinus albus HOM05D003755 ORTHO05D004385 4.4e-91 339.0 340 55.3
Sp1g10170 Schrenkiella parvula HOM05D003755 ORTHO05D004385 2.9e-90 336.3 333 53.8
SGA_v2.0_scaffold89G27449 Striga asiatica HOM05D003755 ORTHO05D004385 3.7e-90 335.9 342 52.6
TPR.G5472 Trifolium pratense HOM05D003755 ORTHO05D004385 3.7e-90 335.9 253 67.2
TWI38G0036 Tripterygium wilfordii HOM05D003755 ORTHO05D004385 6.4e-90 335.1 328 55.8
Sabra04G0011400 Salix brachista HOM05D003755 ORTHO05D004385 7.1e-89 331.6 404 48.5
Peaxi162Scf00079g00073 Petunia axillaris HOM05D003755 ORTHO05D004385 9.2e-89 331.3 314 58.0
AagrBONN_evm.TU.Sc2ySwM_362.2118 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.1e-88 330.1 318 52.2
Mapoly0061s0113 Marchantia polymorpha HOM05D003755 ORTHO05D004385 2.1e-88 330.1 339 49.3
PGSC0003DMG400002072 Solanum tuberosum HOM05D003755 ORTHO05D004385 1.7e-87 327.0 337 52.2
Pp3c3_13650 Physcomitrium patens HOM05D003755 ORTHO05D004385 2.3e-87 326.6 314 54.1
Gohir.D06G152000 Gossypium hirsutum HOM05D003755 ORTHO05D004385 1.9e-86 323.6 279 61.6
Lsat_1_v5_gn_1_121441 Lactuca sativa HOM05D003755 ORTHO05D004385 1.9e-86 323.6 350 51.4
Nitab4.5_0002196g0020 Nicotiana tabacum HOM05D003755 ORTHO05D004385 5.6e-86 322.0 330 54.2
Sopen02g024900 Solanum pennellii HOM05D003755 ORTHO05D004385 9.5e-86 321.2 337 51.3
Solyc02g080180.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 6.2e-85 318.5 337 51.0
Carub.0001s1117 Capsella rubella HOM05D003755 ORTHO05D004385 5.2e-84 315.5 316 52.2
AagrBONN_evm.TU.Sc2ySwM_362.2344 Anthoceros agrestis HOM05D003755 ORTHO05D004385 6.8e-84 315.1 318 49.7
Peaxi162Scf00241g00121 Petunia axillaris HOM05D003755 ORTHO05D004385 1.5e-83 313.9 328 54.0
PGSC0003DMG400010547 Solanum tuberosum HOM05D003755 ORTHO05D004385 9.9e-83 311.2 304 55.6
Pp3c26_7270 Physcomitrium patens HOM05D003755 ORTHO05D004385 1.7e-82 310.5 320 49.4
HanXRQChr01g0003661 Helianthus annuus HOM05D003755 ORTHO05D004385 3.2e-81 306.2 311 51.1
SGA_v2.0_scaffold114G32031 Striga asiatica HOM05D003755 ORTHO05D004385 1.6e-80 303.9 323 52.9
Solyc10g008090.1 Solanum lycopersicum HOM05D003755 ORTHO05D004385 2.1e-80 303.5 323 52.0
SalBow8G5594 Salvia bowleyana HOM05D003755 ORTHO05D004385 2.3e-79 300.1 328 48.5
Pp3c10_1910 Physcomitrium patens HOM05D003755 ORTHO05D004385 3.0e-79 299.7 319 47.0
Sopen10g003960 Solanum pennellii HOM05D003755 ORTHO05D004385 3.9e-79 299.3 323 51.7
BraA08t35260Z Brassica rapa HOM05D003755 ORTHO05D004385 5.1e-79 298.9 330 49.4
CAN.G569.37 Capsicum annuum HOM05D003755 ORTHO05D004385 8.6e-79 298.1 344 49.7
A08p33440 Brassica napus HOM05D003755 ORTHO05D004385 2.5e-78 296.6 330 49.1
SMO118G0372 Selaginella moellendorffii HOM05D003755 ORTHO05D004385 3.3e-78 296.2 345 46.1
C08p14530 Brassica napus HOM05D003755 ORTHO05D004385 1.6e-77 293.9 331 49.5
Haze_06749 Corylus avellana HOM05D003755 ORTHO05D004385 3.6e-77 292.7 257 63.4
BcaB03g13253 Brassica carinata HOM05D003755 ORTHO05D004385 3.4e-75 286.2 327 49.8
Lj1A1226T40 Lonicera japonica HOM05D003755 ORTHO05D004385 4.4e-75 285.8 284 56.0
BcaC07g38668 Brassica carinata HOM05D003755 ORTHO05D004385 5.8e-75 285.4 332 48.5
BolC8t49101H Brassica oleracea HOM05D003755 ORTHO05D004385 5.8e-75 285.4 332 48.5
MBI14_g15203_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 1.2e-72 277.7 222 62.2
Nn1g03617 Nelumbo nucifera HOM05D003755 ORTHO05D004385 6.0e-72 275.4 179 75.4
Nitab4.5_0002196g0010 Nicotiana tabacum HOM05D000234 ORTHO05D004385 2.3e-71 273.5 281 54.4
Gohir.A09G069600 Gossypium hirsutum HOM05D003755 ORTHO05D004385 3.0e-71 273.1 269 53.5
AUR62021999 Chenopodium quinoa HOM05D003755 ORTHO05D004385 5.6e-70 268.9 189 69.3
Nitab4.5_0010745g0030 Nicotiana tabacum HOM05D003755 ORTHO05D004385 6.2e-69 265.4 191 66.5
CAN.G404.10 Capsicum annuum HOM05D003755 ORTHO05D004385 3.4e-67 259.6 189 66.1
MBI06_g27714_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 4.4e-67 259.2 189 67.2
CBR_g36660 Chara braunii HOM05D003755 ORTHO05D004385 5.4e-65 252.3 321 45.2
MBI19_g26612_MAGBIO Magnolia biondii HOM05D003755 ORTHO05D004385 3.6e-61 239.6 183 66.1
Nitab4.5_0002347g0110 Nicotiana tabacum HOM05D003755 ORTHO05D004385 8.1e-61 238.4 189 62.4
Sed0022949 Sechium edule HOM05D003755 ORTHO05D004385 4.9e-58 229.2 215 59.1
Peaxi162Scf00427g00012 Petunia axillaris HOM05D003755 ORTHO05D004385 7.1e-57 225.3 190 61.1
CBR_g46234 Chara braunii HOM05D003755 ORTHO05D004385 5.6e-54 215.7 334 38.9
Nitab4.5_0002645g0040 Nicotiana tabacum HOM05D003755 ORTHO05D004385 4.5e-51 206.1 184 57.1
Lsat_1_v5_gn_3_29240 Lactuca sativa HOM05D003755 ORTHO05D004385 8.4e-50 201.8 325 40.6
CAN.G782.22 Capsicum annuum HOM05D003755 ORTHO05D004385 1.9e-49 200.7 240 47.5
Actinidia26947 Actinidia chinensis HOM05D003755 ORTHO05D004385 1.5e-46 191.0 226 51.3
TPR.G16992 Trifolium pratense HOM05D003755 ORTHO05D004385 4.3e-46 189.5 165 61.2
Lsat_1_v5_gn_7_27941 Lactuca sativa HOM05D003755 ORTHO05D004385 2.5e-33 147.1 172 47.1
BraA01t03199Z Brassica rapa HOM05D003755 ORTHO05D004385 2.3e-31 140.6 158 51.3
CAN.G782.11 Capsicum annuum HOM05D003755 ORTHO05D004385 1.5e-30 137.9 169 49.7
BcaC04g22351 Brassica carinata HOM05D003755 ORTHO05D004385 2.8e-29 133.7 104 67.3
Lsat_1_v5_gn_7_47961 Lactuca sativa HOM05D003755 ORTHO05D004385 3.7e-29 133.3 92 67.4
Lsat_1_v5_gn_4_80500 Lactuca sativa HOM05D003755 ORTHO05D004385 3.8e-26 123.2 89 68.5
Cre16.g675602 Chlamydomonas reinhardtii HOM05D003755 ORTHO05D004385 1.1e-25 121.7 311 28.6
CAN.G782.12 Capsicum annuum HOM05D003755 ORTHO05D004385 7.2e-25 119.0 95 58.9
MD02G1269300 Malus domestica HOM05D003755 ORTHO05D004385 4.4e-22 109.8 77 68.8
QL08p007617 Quercus lobata HOM05D003755 ORTHO05D004385 8.5e-18 95.5 81 56.8
QL10p045362 Quercus lobata HOM05D003755 ORTHO05D004385 4.2e-17 93.2 80 57.5
C09p20250 Brassica napus HOM05D003755 ORTHO05D004385 1.6e-16 91.3 75 64.0
MD02G1269200 Malus domestica HOM05D003755 ORTHO05D004385 6.7e-15 85.9 76 56.6
BolC9t54930H Brassica oleracea HOM05D003755 ORTHO05D004385 1.1e-12 78.6 57 64.9
EL10As1g23076 Beta vulgaris HOM05D003755 ORTHO05D004385 9.1e-12 75.5 48 75.0
Lsat_1_v5_gn_7_47981 Lactuca sativa HOM05D003755 ORTHO05D004385 1.2e-11 75.1 67 56.7
BcaB07g31286 Brassica carinata HOM05D003755 ORTHO05D004385 7.7e-11 72.4 74 56.8
QL03p066087 Quercus lobata HOM05D003755 ORTHO05D004385 4.2e-09 66.6 54 63.0
AagrBONN_evm.TU.Sc2ySwM_228.3672 Anthoceros agrestis HOM05D003755 ORTHO05D004385 2.7e-08 63.9 69 44.9


User provided reference genes

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