Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2583 Papaver somniferum HOM05D006107 ORTHO05D007455 0.0e+00 1171.4 584 100.0
PSO541G4551 Papaver somniferum HOM05D006107 ORTHO05D007455 0.0e+00 1140.9 585 97.3
MBI03_g13479_MAGBIO Magnolia biondii HOM05D006107 ORTHO05D007455 2.9e-281 971.5 576 83.0
TAR376G0662 Trochodendron aralioides HOM05D006107 ORTHO05D007455 5.6e-280 967.2 575 82.8
Aqoxy6G01306 Aquilegia oxysepala HOM05D006107 ORTHO05D007455 6.6e-273 943.7 584 78.9
Gohir.A12G023600 Gossypium hirsutum HOM05D006107 ORTHO05D007455 4.0e-270 934.5 581 77.3
QL11p035424 Quercus lobata HOM05D006107 ORTHO05D007455 8.9e-270 933.3 575 79.3
Gorai.008G024600 Gossypium raimondii HOM05D006107 ORTHO05D007455 5.8e-269 930.6 581 77.1
Rhsim05G0085900 Rhododendron simsii HOM05D006107 ORTHO05D007455 9.8e-269 929.9 582 79.4
Thecc.02G102000 Theobroma cacao HOM05D006107 ORTHO05D007455 9.8e-269 929.9 580 78.4
Duzib132G0557 Durio zibethinus HOM05D006107 ORTHO05D007455 1.7e-268 929.1 579 77.4
Gohir.D12G024200 Gossypium hirsutum HOM05D006107 ORTHO05D007455 1.7e-268 929.1 581 76.8
CSS0002619 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 2.2e-268 928.7 548 81.9
ATR1126G046 Amborella trichopoda HOM05D006107 ORTHO05D007455 6.4e-268 927.2 554 81.6
CSS0005791 Camellia sinensis var. sinensis HOM05D006107 ORTHO05D007455 8.3e-268 926.8 548 81.8
RcHm_v2.0_Chr6g0257681 Rosa chinensis HOM05D006107 ORTHO05D007455 1.1e-267 926.4 575 79.0
CsaV3_7G008530 Cucumis sativus L. HOM05D006107 ORTHO05D007455 5.4e-267 924.1 548 81.0
arahy.Tifrunner.gnm1.ann1.Q9TTL4 Arachis hypogaea HOM05D006107 ORTHO05D007455 9.2e-267 923.3 555 81.1
Sabra09G0076700 Salix brachista HOM05D006107 ORTHO05D007455 1.2e-266 922.9 575 78.3
GSVIVG01031728001 Vitis vinifera HOM05D006107 ORTHO05D007455 6.0e-266 920.6 579 77.7
Potri.009G100800 Populus trichocarpa HOM05D006107 ORTHO05D007455 7.8e-266 920.2 575 78.4
Sed0010263 Sechium edule HOM05D006107 ORTHO05D007455 1.0e-265 919.8 580 77.6
FAN20G2345 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.7e-265 919.1 576 79.2
Hma1.2p1_0474F.1_g160480 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 2.3e-265 918.7 547 81.2
FAN15G1599 Fragaria x ananassa HOM05D006107 ORTHO05D007455 3.0e-265 918.3 576 79.2
TWI31G1484 Tripterygium wilfordii HOM05D006107 ORTHO05D007455 3.9e-265 917.9 553 79.7
FvH4_2g05870 Fragaria vesca HOM05D006107 ORTHO05D007455 5.1e-265 917.5 575 78.8
PGR042G0079 Punica granatum HOM05D006107 ORTHO05D007455 8.6e-265 916.8 576 78.1
Atru.chr5.2684 Acer truncatum HOM05D006107 ORTHO05D007455 2.5e-264 915.2 542 82.1
FAN24G1318 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.2e-263 912.9 575 78.4
Prupe.8G126800 Prunus persica HOM05D006107 ORTHO05D007455 2.1e-263 912.1 577 78.2
HPP92_004071 Vanilla planifolia HOM05D006107 ORTHO05D007455 2.1e-263 912.1 540 81.7
THA.LOC104807265 Tarenaya hassleriana HOM05D006107 ORTHO05D007455 4.7e-263 911.0 543 81.0
Lj5A210T89 Lonicera japonica HOM05D006107 ORTHO05D007455 3.1e-262 908.3 581 76.1
BcaB03g11861 Brassica carinata HOM05D006107 ORTHO05D007455 5.2e-262 907.5 542 80.4
Eucgr.G01434 Eucalyptus grandis HOM05D006107 ORTHO05D007455 8.9e-262 906.7 541 80.4
AT4G34030 Arabidopsis thaliana HOM05D006107 ORTHO05D007455 1.2e-261 906.4 542 80.1
Ciclev10028103m.g Citrus clementina HOM05D006107 ORTHO05D007455 2.6e-261 905.2 575 77.9
Lalb_Chr16g0384781 Lupinus albus HOM05D006107 ORTHO05D007455 2.6e-261 905.2 550 79.6
AL7G17360 Arabidopsis lyrata HOM05D006107 ORTHO05D007455 3.4e-261 904.8 542 80.3
MD05G1082300 Malus domestica HOM05D006107 ORTHO05D007455 4.4e-261 904.4 575 77.7
Carub.0007s0637 Capsella rubella HOM05D006107 ORTHO05D007455 5.8e-261 904.0 588 74.8
ClCG02G006000 Citrullus lanatus HOM05D006107 ORTHO05D007455 1.7e-260 902.5 583 76.5
Thhalv10024753m.g Eutrema salsugineum HOM05D006107 ORTHO05D007455 3.7e-260 901.4 542 79.9
BraA08t33679Z Brassica rapa HOM05D006107 ORTHO05D007455 1.1e-259 899.8 542 79.7
Migut.B00356 Erythranthe guttata HOM05D006107 ORTHO05D007455 1.4e-259 899.4 580 77.4
Peaxi162Scf00016g01935 Petunia axillaris HOM05D006107 ORTHO05D007455 1.4e-259 899.4 553 79.7
A08p17180 Brassica napus HOM05D006107 ORTHO05D007455 2.4e-259 898.7 542 79.5
Sc18g0004170 Simmondsia chinensis HOM05D006107 ORTHO05D007455 3.2e-259 898.3 576 76.6
C03p86150 Brassica napus HOM05D006107 ORTHO05D007455 4.1e-259 897.9 586 75.3
Hund06173 Selenicereus undatus HOM05D006107 ORTHO05D007455 5.4e-259 897.5 577 76.3
BcaC01g00937 Brassica carinata HOM05D006107 ORTHO05D007455 7.1e-259 897.1 586 75.4
Sp7g31760 Schrenkiella parvula HOM05D006107 ORTHO05D007455 7.1e-259 897.1 542 79.2
Medtr4g085890 Medicago truncatula HOM05D006107 ORTHO05D007455 1.2e-258 896.3 525 81.9
Phvul.003G291600 Phaseolus vulgaris HOM05D006107 ORTHO05D007455 1.2e-258 896.3 522 82.8
Aa31LG2G16450 Aethionema arabicum HOM05D006107 ORTHO05D007455 3.5e-258 894.8 542 79.5
arahy.Tifrunner.gnm1.ann1.H5D5IL Arachis hypogaea HOM05D006107 ORTHO05D007455 3.5e-258 894.8 581 76.8
BolC3t20903H Brassica oleracea HOM05D006107 ORTHO05D007455 3.5e-258 894.8 586 75.3
RcHm_v2.0_Chr6g0257701 Rosa chinensis HOM05D006107 ORTHO05D007455 6.0e-258 894.0 575 76.5
TPR.G12695 Trifolium pratense HOM05D006107 ORTHO05D007455 6.0e-258 894.0 522 81.8
EL10Ac1g02230 Beta vulgaris HOM05D006107 ORTHO05D007455 7.8e-258 893.6 557 77.4
Lj4g0016203 Lotus japonicus HOM05D006107 ORTHO05D007455 7.8e-258 893.6 522 82.4
A03p62570 Brassica napus HOM05D006107 ORTHO05D007455 1.0e-257 893.3 588 74.5
Glyma.07G213500 Glycine max HOM05D006107 ORTHO05D007455 1.0e-257 893.3 525 81.7
VMungo0251G2128 Vigna mungo HOM05D006107 ORTHO05D007455 1.7e-257 892.5 525 81.9
Zm00001eb179170 Zea mays HOM05D006107 ORTHO05D007455 2.3e-257 892.1 540 79.8
Psat7g125400 Pisum sativum HOM05D006107 ORTHO05D007455 8.6e-257 890.2 522 81.2
vmacro19505 Vaccinium macrocarpon HOM05D006107 ORTHO05D007455 1.1e-256 889.8 685 67.4
Ca_18695_v3 Cicer arietinum L. HOM05D006107 ORTHO05D007455 1.5e-256 889.4 521 81.8
C07p60130 Brassica napus HOM05D006107 ORTHO05D007455 4.3e-256 887.9 542 79.0
BolC7t46453H Brassica oleracea HOM05D006107 ORTHO05D007455 4.3e-256 887.9 542 79.0
CANSAT25G2960 Cannabis sativa HOM05D006107 ORTHO05D007455 5.6e-256 887.5 545 78.0
SGA_v2.0_scaffold90G27632 Striga asiatica HOM05D006107 ORTHO05D007455 5.6e-256 887.5 575 76.2
Haze_10087 Corylus avellana HOM05D006107 ORTHO05D007455 7.3e-256 887.1 575 76.0
Glyma.02G131500 Glycine max HOM05D006107 ORTHO05D007455 7.3e-256 887.1 522 82.0
SalBow6G1673 Salvia bowleyana HOM05D006107 ORTHO05D007455 2.8e-255 885.2 541 79.9
CAN.G1041.37 Capsicum annuum HOM05D006107 ORTHO05D007455 3.6e-255 884.8 542 78.6
Cfa004529 Carpinus fangiana HOM05D006107 ORTHO05D007455 1.1e-254 883.2 508 83.5
Sopen01g050230 Solanum pennellii HOM05D006107 ORTHO05D007455 1.8e-254 882.5 541 78.4
COL.COLO4_32644 Corchorus olitorius HOM05D006107 ORTHO05D007455 2.4e-254 882.1 583 75.1
ECA236G2832 Erigeron canadensis HOM05D006107 ORTHO05D007455 3.4e-253 878.2 541 76.9
Solyc01g108030.4 Solanum lycopersicum HOM05D006107 ORTHO05D007455 3.4e-253 878.2 541 78.2
AUR62035403 Chenopodium quinoa HOM05D006107 ORTHO05D007455 7.6e-253 877.1 571 75.5
Nitab4.5_0018866g0010 Nicotiana tabacum HOM05D006107 ORTHO05D007455 3.8e-252 874.8 557 76.8
HanXRQChr11g0331361 Helianthus annuus HOM05D006107 ORTHO05D007455 4.9e-252 874.4 551 75.7
Cc02_g18880 Coffea canephora HOM05D006107 ORTHO05D007455 1.9e-251 872.5 521 81.6
Lsat_1_v5_gn_7_86820 Lactuca sativa HOM05D006107 ORTHO05D007455 4.2e-251 871.3 535 77.4
CDE10G1185 Ceratophyllum demersum HOM05D006107 ORTHO05D007455 3.5e-250 868.2 542 78.0
Mapoly0009s0150 Marchantia polymorpha HOM05D006107 ORTHO05D007455 6.0e-250 867.5 555 76.0
DCAR_001629 Daucus carota HOM05D006107 ORTHO05D007455 6.6e-249 864.0 521 80.6
PGSC0003DMG400025888 Solanum tuberosum HOM05D006107 ORTHO05D007455 1.9e-248 862.4 521 79.5
Pp3c3_22750 Physcomitrium patens HOM05D006107 ORTHO05D007455 3.6e-247 858.2 542 76.0
Nn5g30280 Nelumbo nucifera HOM05D006107 ORTHO05D007455 1.3e-244 849.7 468 88.0
Dinv42164 Davidia involucrata HOM05D006107 ORTHO05D007455 1.6e-242 842.8 570 74.0
Nitab4.5_0001428g0130 Nicotiana tabacum HOM05D006107 ORTHO05D007455 1.0e-241 840.1 575 71.8
BcaNung03357 Brassica carinata HOM05D006107 ORTHO05D007455 2.5e-240 835.5 542 75.5
unitig_21.g20740 Utricularia gibba HOM05D006107 ORTHO05D007455 1.5e-237 826.2 575 71.1
AagrBONN_evm.TU.Sc2ySwM_368.3420 Anthoceros agrestis HOM05D006107 ORTHO05D007455 2.1e-234 815.8 544 72.2
CARHR242170 Cardamine hirsuta HOM05D006107 ORTHO05D007455 1.2e-229 800.0 468 81.4
Cpa.g.sc62.2 Carica papaya HOM05D006107 ORTHO05D007455 2.0e-229 799.3 488 82.0
Oeu007292.2 Olea europaea HOM05D006107 ORTHO05D007455 2.6e-229 798.9 514 76.8
SEGI_09747 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 3.2e-227 792.0 466 82.8
FAN27G3033 Fragaria x ananassa HOM05D006107 ORTHO05D007455 1.2e-226 790.0 521 75.2
MELO3C018456.2 Cucumis melo HOM05D006107 ORTHO05D007455 1.5e-224 783.1 500 77.0
HPP92_004116 Vanilla planifolia HOM05D006107 ORTHO05D007455 8.2e-223 777.3 540 72.0
CiPaw.05G007100 Carya illinoinensis HOM05D006107 ORTHO05D007455 1.0e-220 770.4 439 84.3
Manes.07G078100 Manihot esculenta HOM05D006107 ORTHO05D007455 1.9e-216 756.1 443 82.8
SMO174G0062 Selaginella moellendorffii HOM05D006107 ORTHO05D007455 4.5e-213 745.0 542 67.5
Cre03.g181200 Chlamydomonas reinhardtii HOM05D006107 ORTHO05D007455 1.4e-198 696.8 567 60.3
AUR62041887 Chenopodium quinoa HOM05D006107 ORTHO05D007455 3.2e-187 659.1 464 70.0
Actinidia17868 Actinidia chinensis HOM05D006107 ORTHO05D007455 3.7e-175 619.0 584 58.4
Haze_26655 Corylus avellana HOM05D006107 ORTHO05D007455 7.0e-174 614.8 565 54.9
PRCOL_00006414 Prasinoderma coloniale HOM05D006107 ORTHO05D007455 2.7e-173 612.8 527 58.4
Haze_27116 Corylus avellana HOM05D006107 ORTHO05D007455 1.2e-154 550.8 461 57.9
Haze_27030 Corylus avellana HOM05D006107 ORTHO05D007455 1.2e-152 544.3 518 54.1
Ah.00g000150 Amaranthus hybridus HOM05D006107 ORTHO05D007455 5.4e-142 508.8 332 74.4
Hma1.2p1_0474F.1_g160470 Hydrangea macrophylla HOM05D006107 ORTHO05D007455 4.5e-120 436.0 286 76.6
Haze_26656 Corylus avellana HOM05D006107 ORTHO05D007455 1.9e-86 324.3 254 61.4
QL11p035444 Quercus lobata HOM05D006107 ORTHO05D007455 2.3e-76 290.8 158 87.3
CBR_g54985 Chara braunii HOM05D006107 ORTHO05D007455 2.4e-57 227.6 501 30.1
Medtr3g011860 Medicago truncatula HOM05D006107 ORTHO05D007455 3.5e-40 170.6 208 47.6
QL11p035447 Quercus lobata HOM05D006107 ORTHO05D007455 1.4e-33 148.7 91 79.1
Cfa025742 Carpinus fangiana HOM05D006107 ORTHO05D007455 3.3e-30 137.5 439 25.7
CARHR242160 Cardamine hirsuta HOM05D006107 ORTHO05D007455 2.1e-21 108.2 122 50.8
QL11p035449 Quercus lobata HOM05D006107 ORTHO05D007455 3.6e-21 107.5 64 75.0
SEGI_09117 Sequoiadendron giganteum HOM05D006107 ORTHO05D007455 2.7e-16 91.3 76 57.9
CDE05G3043 Ceratophyllum demersum HOM05D003397 ORTHO05D004390 2.9e-10 71.2 387 25.8
Solyc01g108060.2 Solanum lycopersicum HOM05D006107 ORTHO05D007455 2.3e-07 61.6 30 93.3
Cfa022865 Carpinus fangiana HOM05D003397 ORTHO05D004390 3.9e-07 60.8 267 25.5
unitig_744.g24231 Utricularia gibba HOM05D006107 ORTHO05D007455 4.3e-06 57.4 61 44.3


User provided reference genes

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