Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 4.5e-273 944.1 524 100.0
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 1.8e-258 895.6 527 93.2
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 5.1e-176 621.7 436 78.7
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 8.8e-176 620.9 505 70.3
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 2.0e-175 619.8 525 68.6
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 2.6e-175 619.4 485 72.2
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 3.3e-175 619.0 469 74.2
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 4.4e-175 618.6 440 76.8
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 2.2e-174 616.3 523 67.5
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 2.8e-174 615.9 530 67.7
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 3.7e-174 615.5 498 69.9
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 1.5e-172 610.1 468 71.6
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.5e-172 610.1 494 70.2
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 2.0e-172 609.8 524 67.2
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 2.6e-172 609.4 526 66.7
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 2.6e-172 609.4 526 66.7
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 2.6e-172 609.4 463 71.7
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 2.6e-172 609.4 485 70.9
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 5.9e-172 608.2 525 66.5
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 1.7e-171 606.7 506 67.8
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 1.7e-171 606.7 491 69.2
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 3.8e-171 605.5 470 72.6
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 3.8e-171 605.5 470 72.6
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 5.0e-171 605.1 525 65.5
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 5.0e-171 605.1 477 70.6
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 8.5e-171 604.4 470 72.3
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 8.5e-171 604.4 461 72.0
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 1.1e-170 604.0 520 66.0
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 1.4e-170 603.6 461 72.5
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 1.9e-170 603.2 524 65.8
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 1.9e-170 603.2 497 67.8
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 1.9e-170 603.2 477 69.8
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 2.5e-170 602.8 520 66.0
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 3.2e-170 602.4 524 65.6
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 3.2e-170 602.4 444 74.5
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 4.2e-170 602.1 430 76.0
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 4.2e-170 602.1 521 66.2
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 4.2e-170 602.1 489 68.7
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 7.2e-170 601.3 474 71.3
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 7.2e-170 601.3 501 67.7
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 7.2e-170 601.3 534 63.9
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 9.4e-170 600.9 526 65.4
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 9.4e-170 600.9 516 66.7
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 1.2e-169 600.5 504 68.1
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 1.2e-169 600.5 528 66.5
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 1.6e-169 600.1 465 71.4
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 2.1e-169 599.7 523 65.8
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 2.1e-169 599.7 524 65.5
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 2.1e-169 599.7 458 72.9
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 2.7e-169 599.4 503 69.2
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 3.6e-169 599.0 526 66.0
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 3.6e-169 599.0 481 71.3
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 4.7e-169 598.6 523 65.4
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 6.1e-169 598.2 417 76.5
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 6.1e-169 598.2 536 64.7
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 7.9e-169 597.8 449 74.4
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 2.3e-168 596.3 523 66.0
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 2.3e-168 596.3 510 66.5
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 3.0e-168 595.9 508 66.5
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 3.0e-168 595.9 417 77.9
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 6.7e-168 594.7 424 77.4
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 3.3e-167 592.4 527 64.7
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 5.7e-167 591.7 423 74.7
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 1.3e-166 590.5 423 74.7
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 1.3e-166 590.5 464 70.9
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 1.7e-166 590.1 513 66.7
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 1.7e-166 590.1 419 77.3
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 2.2e-166 589.7 513 66.5
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 2.2e-166 589.7 513 66.5
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 2.2e-166 589.7 529 65.4
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 2.8e-166 589.3 417 77.0
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 3.7e-166 589.0 526 64.8
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 3.7e-166 589.0 481 68.2
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 3.7e-166 589.0 467 71.1
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 4.8e-166 588.6 525 63.6
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 6.3e-166 588.2 474 68.6
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 8.2e-166 587.8 532 65.6
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 8.2e-166 587.8 417 76.0
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 1.1e-165 587.4 466 70.0
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 2.4e-165 586.3 463 69.8
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 3.1e-165 585.9 477 67.9
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 3.1e-165 585.9 473 68.7
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 5.3e-165 585.1 471 70.5
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 9.1e-165 584.3 499 66.9
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 1.6e-164 583.6 539 63.3
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 1.6e-164 583.6 436 75.7
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 2.0e-164 583.2 507 65.1
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 2.6e-164 582.8 448 70.5
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 3.5e-164 582.4 439 72.4
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 2.2e-163 579.7 403 76.7
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 5.0e-163 578.6 522 64.4
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 1.1e-162 577.4 417 73.9
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 1.9e-162 576.6 470 68.1
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 3.2e-162 575.9 533 63.8
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 4.2e-162 575.5 412 76.5
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 4.7e-161 572.0 524 63.0
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 6.1e-161 571.6 405 76.5
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 1.0e-160 570.9 418 75.8
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 1.4e-160 570.5 515 63.5
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 4.0e-160 568.9 418 72.5
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 2.0e-159 566.6 417 72.9
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 4.4e-159 565.5 421 72.4
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 9.7e-159 564.3 417 72.7
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 2.2e-158 563.1 522 62.5
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 2.8e-158 562.8 439 70.4
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 2.8e-158 562.8 489 65.6
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 1.1e-157 560.8 431 70.1
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 2.7e-156 556.2 497 64.2
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 1.2e-148 530.8 421 67.5
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 7.2e-146 521.5 432 67.6
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 2.8e-142 509.6 417 69.1
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 6.1e-137 491.9 464 61.9
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 6.8e-136 488.4 432 60.9
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 1.5e-135 487.3 420 62.4
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 1.5e-135 487.3 420 62.4
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 2.2e-134 483.4 460 62.8
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 7.3e-130 468.4 431 59.2
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 1.5e-127 460.7 420 60.0
Actinidia01339 Actinidia chinensis HOM05D005120 ORTHO05D006174 9.2e-117 424.9 341 71.6
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 2.1e-116 423.7 367 61.9
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 2.7e-100 370.2 315 65.1
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 1.3e-99 367.9 349 59.3
PRCOL_00000663 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 9.0e-96 355.1 430 48.1
Atru.chr6.1568 Acer truncatum HOM05D005120 ORTHO05D006174 4.3e-90 336.3 227 80.6
Cre09.g394850 Chlamydomonas reinhardtii HOM05D005120 ORTHO05D006174 8.4e-78 295.4 439 42.6
Lalb_Chr16g0380881 Lupinus albus HOM05D005120 ORTHO05D006174 1.9e-74 284.3 414 44.2
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 2.5e-69 267.3 169 85.2
SMO367G1009 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 4.6e-68 263.1 383 39.2
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 1.8e-67 261.2 229 60.7
CANSAT64G2484 Cannabis sativa HOM05D005120 ORTHO05D006174 5.3e-64 249.6 155 86.5
Pp3c4_7680 Physcomitrium patens HOM05D005120 ORTHO05D006174 1.2e-63 248.4 413 36.1
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 1.3e-62 245.0 196 68.9
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.1e-61 241.9 331 50.2
AagrBONN_evm.TU.Sc2ySwM_368.2516 Anthoceros agrestis HOM05D005120 ORTHO05D006174 5.7e-58 229.6 379 35.9
PRCOL_00006607 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 8.0e-52 209.1 453 35.5
CBR_g23155 Chara braunii HOM05D005120 ORTHO05D006174 5.2e-51 206.5 162 66.0
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 8.5e-38 162.5 268 41.4
SEGI_09610 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 5.4e-32 143.3 126 58.7
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 2.7e-31 141.0 149 57.0
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 1.1e-29 135.6 103 66.0
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 1.6e-28 131.7 161 51.6
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 2.4e-24 117.9 86 68.6
VMungo0647G0996 Vigna mungo HOM05D005120 ORTHO05D006174 3.8e-22 110.5 97 68.0
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 3.0e-14 84.3 107 49.5
MCO13G610 Micromonas commoda HOM05D005120 ORTHO05D006174 1.9e-13 81.6 405 22.7
CDE03G0049 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 4.0e-11 73.9 67 65.7
PRCOL_00001036 Prasinoderma coloniale HOM05D001145 ORTHO05D014381 1.1e-08 65.9 417 23.5
PRCOL_00005007 Prasinoderma coloniale HOM05D013059 ORTHO05D014381 1.7e-06 58.5 352 26.1


User provided reference genes

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