Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 2.0e-95 352.4 184 100.0
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 4.0e-91 338.2 184 95.1
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 3.4e-50 202.2 153 69.9
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 7.6e-50 201.1 193 59.6
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 2.9e-49 199.1 150 70.0
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 4.9e-49 198.4 143 72.7
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 4.9e-49 198.4 135 74.8
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 1.9e-48 196.4 158 65.2
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 1.9e-48 196.4 144 70.1
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 2.4e-48 196.1 134 73.1
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 3.2e-48 195.7 134 73.1
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 3.2e-48 195.7 191 55.5
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 4.2e-48 195.3 158 63.9
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 4.2e-48 195.3 187 57.2
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 4.2e-48 195.3 140 71.4
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 9.3e-48 194.1 140 68.6
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 1.2e-47 193.7 187 57.8
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 1.6e-47 193.4 139 67.6
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 1.6e-47 193.4 148 65.5
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 1.6e-47 193.4 135 71.9
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 2.7e-47 192.6 136 69.9
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 4.6e-47 191.8 145 65.5
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 4.6e-47 191.8 133 72.9
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 1.0e-46 190.7 183 56.3
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 1.3e-46 190.3 154 63.6
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.8e-46 189.9 179 57.5
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.0e-46 189.1 154 63.6
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 3.0e-46 189.1 157 61.8
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 3.0e-46 189.1 155 66.5
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 3.9e-46 188.7 148 64.2
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 5.1e-46 188.3 132 70.5
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 8.7e-46 187.6 129 72.1
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 1.1e-45 187.2 188 53.2
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 1.1e-45 187.2 148 63.5
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 1.5e-45 186.8 144 66.7
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 1.5e-45 186.8 149 64.4
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 1.9e-45 186.4 145 66.9
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 1.9e-45 186.4 129 71.3
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 2.5e-45 186.0 133 69.2
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 3.3e-45 185.7 132 70.5
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 5.6e-45 184.9 147 63.3
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 5.6e-45 184.9 142 67.6
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 9.6e-45 184.1 144 65.3
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 1.3e-44 183.7 121 73.6
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 1.3e-44 183.7 189 54.5
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 1.6e-44 183.3 140 66.4
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.1e-44 183.0 128 71.9
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 2.8e-44 182.6 128 72.7
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 4.8e-44 181.8 156 60.9
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 6.2e-44 181.4 186 54.8
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 1.1e-43 180.6 195 54.9
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 1.8e-43 179.9 134 68.7
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 1.8e-43 179.9 134 68.7
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 1.8e-43 179.9 181 53.0
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 1.8e-43 179.9 147 63.9
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 3.1e-43 179.1 133 70.7
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.1e-43 179.1 133 70.7
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.1e-43 179.1 133 70.7
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 3.1e-43 179.1 133 70.7
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 3.1e-43 179.1 181 58.6
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 6.9e-43 177.9 135 67.4
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 9.0e-43 177.6 136 64.0
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 1.5e-42 176.8 134 67.9
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 2.0e-42 176.4 193 55.4
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 4.5e-42 175.3 146 63.7
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 4.5e-42 175.3 174 56.9
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 5.8e-42 174.9 134 69.4
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 5.8e-42 174.9 192 55.2
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 7.6e-42 174.5 134 68.7
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 7.6e-42 174.5 134 61.9
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 7.6e-42 174.5 167 56.3
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 1.0e-41 174.1 175 55.4
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 1.7e-41 173.3 136 61.8
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.7e-41 173.3 146 62.3
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 2.2e-41 172.9 134 66.4
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 2.2e-41 172.9 134 66.4
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 2.9e-41 172.6 126 67.5
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 3.8e-41 172.2 142 60.6
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 6.5e-41 171.4 144 62.5
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 6.5e-41 171.4 143 60.8
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 8.4e-41 171.0 144 63.2
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 8.4e-41 171.0 186 53.8
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 1.1e-40 170.6 142 59.9
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 1.9e-40 169.9 134 66.4
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 2.5e-40 169.5 178 56.2
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 2.5e-40 169.5 178 56.2
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 3.2e-40 169.1 166 53.6
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 4.2e-40 168.7 166 53.0
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 7.1e-40 167.9 184 54.3
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 7.1e-40 167.9 197 51.8
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 7.1e-40 167.9 134 66.4
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 3.5e-39 165.6 117 65.8
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 4.6e-39 165.2 125 66.4
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 4.6e-39 165.2 125 66.4
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 7.9e-39 164.5 162 53.1
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 1.0e-38 164.1 146 56.2
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 1.8e-38 163.3 187 48.7
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 5.1e-38 161.8 105 76.2
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 6.7e-38 161.4 129 63.6
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 7.4e-37 157.9 135 57.8
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 3.7e-36 155.6 183 45.4
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 4.8e-36 155.2 186 50.5
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 6.2e-36 154.8 116 68.1
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 3.1e-35 152.5 167 52.7
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 4.1e-35 152.1 110 70.9
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.7e-33 146.7 114 64.0
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 3.8e-33 145.6 130 59.2
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 5.0e-33 145.2 133 57.1
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 5.0e-33 145.2 156 50.6
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 8.4e-33 144.4 128 60.9
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 3.2e-32 142.5 88 75.0
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 1.3e-30 137.1 97 70.1
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 3.9e-30 135.6 99 67.7
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 1.5e-29 133.7 129 54.3
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 5.7e-29 131.7 109 56.9
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.4e-27 127.1 111 54.1
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 2.6e-26 122.9 122 48.4
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 1.1e-24 117.5 187 37.4
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 1.4e-16 90.5 137 36.5
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.4e-14 84.0 101 45.5
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 5.1e-14 82.0 95 53.7
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 7.4e-13 78.2 48 75.0
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.6e-10 69.7 61 54.1
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 1.0e-06 57.8 81 40.7


User provided reference genes

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