Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 3.9e-79 298.1 159 100.0
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.0e-74 283.5 159 96.2
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 8.1e-40 167.5 178 57.3
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 1.1e-39 167.2 178 58.4
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 3.9e-34 148.7 162 57.4
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 8.6e-34 147.5 164 57.9
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 1.1e-33 147.1 168 55.4
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.9e-33 146.4 178 55.1
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 7.3e-33 144.4 167 56.3
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 8.1e-32 141.0 168 54.8
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 1.4e-31 140.2 162 56.2
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 5.2e-31 138.3 169 53.8
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 5.2e-31 138.3 166 54.2
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 1.2e-30 137.1 166 52.4
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 1.2e-30 137.1 150 58.0
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.5e-30 136.7 162 56.2
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 1.5e-30 136.7 177 52.0
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 2.0e-30 136.3 164 54.9
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 2.0e-30 136.3 162 54.3
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 2.0e-30 136.3 149 58.4
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 3.4e-30 135.6 164 56.1
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 3.4e-30 135.6 168 54.2
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 4.4e-30 135.2 163 55.2
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 4.4e-30 135.2 157 56.1
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 7.6e-30 134.4 171 51.5
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.3e-29 133.7 154 54.5
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.3e-29 133.7 154 54.5
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 2.2e-29 132.9 158 55.1
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.2e-29 132.9 166 53.0
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.2e-29 132.9 166 53.0
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 2.2e-29 132.9 182 48.4
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 2.2e-29 132.9 163 53.4
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 2.9e-29 132.5 174 50.0
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 2.9e-29 132.5 162 54.3
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 2.9e-29 132.5 163 53.4
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 3.7e-29 132.1 154 54.5
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 4.9e-29 131.7 177 50.8
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 4.9e-29 131.7 178 51.7
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 8.4e-29 131.0 177 49.2
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 8.4e-29 131.0 153 52.9
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 8.4e-29 131.0 153 52.9
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.4e-28 130.2 167 53.3
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 1.4e-28 130.2 163 52.8
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 3.2e-28 129.0 154 53.9
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 5.4e-28 128.3 184 48.9
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 7.1e-28 127.9 185 50.3
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 7.1e-28 127.9 171 51.5
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 9.2e-28 127.5 171 52.0
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 1.2e-27 127.1 182 47.3
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 1.2e-27 127.1 179 47.5
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 1.6e-27 126.7 156 53.2
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 1.6e-27 126.7 175 48.6
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 2.7e-27 125.9 166 52.4
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 6.0e-27 124.8 169 49.1
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 7.8e-27 124.4 86 79.1
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 1.3e-26 123.6 127 59.8
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 1.3e-26 123.6 160 51.2
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.7e-26 123.2 146 54.8
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 2.3e-26 122.9 160 53.8
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 3.0e-26 122.5 92 71.7
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 3.0e-26 122.5 92 71.7
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 3.0e-26 122.5 167 49.7
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 3.0e-26 122.5 167 49.7
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 1.1e-25 120.6 163 49.7
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 1.5e-25 120.2 154 51.3
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.5e-25 120.2 167 49.1
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.9e-25 119.8 146 52.7
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 1.9e-25 119.8 170 49.4
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 2.5e-25 119.4 83 77.1
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 3.3e-25 119.0 174 48.9
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 3.3e-25 119.0 101 67.3
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 5.6e-25 118.2 129 58.9
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 7.3e-25 117.9 155 49.0
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 7.3e-25 117.9 156 52.6
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 7.3e-25 117.9 156 52.6
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 9.6e-25 117.5 165 50.3
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 9.6e-25 117.5 159 50.3
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 9.6e-25 117.5 178 47.8
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.2e-24 117.1 156 51.9
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.2e-24 117.1 156 51.9
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 1.2e-24 117.1 153 51.6
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 1.2e-24 117.1 110 60.0
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 2.1e-24 116.3 177 49.7
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 2.1e-24 116.3 156 51.9
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 2.1e-24 116.3 183 45.9
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 2.1e-24 116.3 144 53.5
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 2.1e-24 116.3 96 67.7
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 2.1e-24 116.3 168 49.4
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 2.8e-24 115.9 152 51.3
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 3.6e-24 115.5 153 53.6
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 6.2e-24 114.8 138 55.1
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 1.1e-23 114.0 166 51.2
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 1.1e-23 114.0 86 72.1
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 1.4e-23 113.6 135 51.9
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 1.4e-23 113.6 86 69.8
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 3.1e-23 112.5 96 66.7
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 3.1e-23 112.5 159 49.1
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 5.2e-23 111.7 166 50.6
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 6.8e-23 111.3 125 54.4
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 8.9e-23 110.9 89 66.3
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 2.6e-22 109.4 124 51.6
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 9.9e-22 107.5 148 47.3
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 2.9e-21 105.9 95 61.1
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 3.8e-21 105.5 160 48.1
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 3.8e-21 105.5 158 47.5
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.9e-21 105.1 159 47.2
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 2.4e-20 102.8 152 44.7
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 7.1e-20 101.3 154 42.9
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 9.3e-20 100.9 95 61.1
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 7.8e-19 97.8 83 63.9
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.9e-17 93.2 65 78.5
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 4.0e-15 85.5 82 57.3
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 5.8e-14 81.6 86 58.1
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 9.9e-14 80.9 110 42.7
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.8e-13 79.0 86 53.5
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 1.0e-10 70.9 88 47.7
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 3.3e-09 65.9 61 60.7
PSO447G0065 Papaver somniferum HOM05D017122 ORTHO05D303334 3.3e-09 65.9 142 39.4


User provided reference genes

Program Settings