Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2300 Papaver somniferum HOM05D005912 ORTHO05D007329 1.7e-202 709.1 362 100.0
PSO541G6093 Papaver somniferum HOM05D005912 ORTHO05D007329 5.6e-198 694.1 361 97.8
TAR625G0585 Trochodendron aralioides HOM05D005912 ORTHO05D007329 1.9e-121 439.9 362 62.7
Sabra05G0087400 Salix brachista HOM05D005912 ORTHO05D007329 1.9e-116 423.3 365 59.5
Aqoxy6G01899 Aquilegia oxysepala HOM05D005912 ORTHO05D007329 1.2e-115 420.6 363 59.5
TAR288G0001 Trochodendron aralioides HOM05D005912 ORTHO05D007329 2.3e-114 416.4 361 60.7
Potri.005G106500 Populus trichocarpa HOM05D005912 ORTHO05D007329 3.9e-114 415.6 366 59.6
CiPaw.08G179600 Carya illinoinensis HOM05D005912 ORTHO05D007329 1.1e-113 414.1 368 58.7
Dinv40154 Davidia involucrata HOM05D005912 ORTHO05D007329 1.9e-113 413.3 366 60.1
Cfa007040 Carpinus fangiana HOM05D005912 ORTHO05D007329 2.5e-113 412.9 361 58.2
Haze_03689 Corylus avellana HOM05D005912 ORTHO05D007329 2.5e-113 412.9 361 58.2
Gohir.A02G175200 Gossypium hirsutum HOM05D005912 ORTHO05D007329 3.3e-113 412.5 370 57.0
Gorai.003G004900 Gossypium raimondii HOM05D005912 ORTHO05D007329 4.3e-113 412.1 374 56.1
Thecc.01G010100 Theobroma cacao HOM05D005912 ORTHO05D007329 7.3e-113 411.4 345 58.6
Gohir.D03G004600 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.1e-112 409.8 376 56.9
Duzib147G0472 Durio zibethinus HOM05D005912 ORTHO05D007329 3.1e-111 406.0 371 55.3
COL.COLO4_09868 Corchorus olitorius HOM05D005912 ORTHO05D007329 2.6e-110 402.9 330 59.1
Nn6g31870 Nelumbo nucifera HOM05D005912 ORTHO05D007329 9.9e-110 401.0 361 56.5
QL06p052316 Quercus lobata HOM05D005912 ORTHO05D007329 2.2e-109 399.8 289 66.8
PGR102G2191 Punica granatum HOM05D005912 ORTHO05D007329 8.3e-109 397.9 374 55.3
RcHm_v2.0_Chr2g0098181 Rosa chinensis HOM05D005912 ORTHO05D007329 1.4e-108 397.1 371 58.2
Prupe.7G176300 Prunus persica HOM05D005912 ORTHO05D007329 1.9e-108 396.7 332 60.5
ClCG01G020670 Citrullus lanatus HOM05D005912 ORTHO05D007329 4.1e-108 395.6 333 58.9
FvH4_1g10920 Fragaria vesca HOM05D005912 ORTHO05D007329 7.1e-108 394.8 366 59.6
FAN23G1227 Fragaria x ananassa HOM05D005912 ORTHO05D007329 9.2e-108 394.4 364 59.1
Atru.chr3.926 Acer truncatum HOM05D005912 ORTHO05D007329 2.7e-107 392.9 374 56.4
FAN26G2135 Fragaria x ananassa HOM05D005912 ORTHO05D007329 1.3e-106 390.6 366 59.0
Sp7g33520 Schrenkiella parvula HOM05D005912 ORTHO05D007329 5.1e-106 388.7 331 58.6
MBI08_g40329_MAGBIO Magnolia biondii HOM05D005912 ORTHO05D007329 6.6e-106 388.3 361 57.1
vmacro20502 Vaccinium macrocarpon HOM05D005912 ORTHO05D007329 8.6e-106 387.9 329 59.0
Thhalv10025477m.g Eutrema salsugineum HOM05D005912 ORTHO05D007329 9.5e-105 384.4 367 55.0
CAN.G890.19 Capsicum annuum HOM05D005912 ORTHO05D007329 2.8e-104 382.9 353 56.1
Nitab4.5_0001696g0090 Nicotiana tabacum HOM05D004598 ORTHO05D005550 4.7e-104 382.1 350 57.7
THA.LOC104807519 Tarenaya hassleriana HOM05D005912 ORTHO05D007329 4.7e-104 382.1 377 52.8
MD02G1122300 Malus domestica HOM05D005912 ORTHO05D007329 6.2e-104 381.7 337 59.1
Manes.01G152000 Manihot esculenta HOM05D005912 ORTHO05D007329 6.2e-104 381.7 349 58.7
A01p02950 Brassica napus HOM05D005912 ORTHO05D007329 1.1e-103 380.9 292 63.4
BraA01t00278Z Brassica rapa HOM05D005912 ORTHO05D007329 1.1e-103 380.9 292 63.4
Nitab4.5_0004259g0040 Nicotiana tabacum HOM05D004598 ORTHO05D005550 1.4e-103 380.6 349 58.2
Actinidia17396 Actinidia chinensis HOM05D005912 ORTHO05D007329 1.8e-103 380.2 361 56.2
BolC1t00315H Brassica oleracea HOM05D005912 ORTHO05D007329 1.8e-103 380.2 292 63.0
Ah.11g045130 Amaranthus hybridus HOM05D005912 ORTHO05D007329 4.0e-103 379.0 350 54.9
CARHR244100 Cardamine hirsuta HOM05D005912 ORTHO05D007329 4.0e-103 379.0 331 57.4
Ciclev10025822m.g Citrus clementina HOM05D005912 ORTHO05D007329 5.2e-103 378.6 317 59.3
C01p03300 Brassica napus HOM05D005912 ORTHO05D007329 8.9e-103 377.9 325 58.8
Eucgr.J02496 Eucalyptus grandis HOM05D005912 ORTHO05D007329 1.2e-102 377.5 291 63.2
CsaV3_6G047590 Cucumis sativus L. HOM05D005912 ORTHO05D007329 2.0e-102 376.7 291 62.9
Carub.0007s0449 Capsella rubella HOM05D005912 ORTHO05D007329 3.4e-102 375.9 366 54.6
PGSC0003DMG400001581 Solanum tuberosum HOM05D005912 ORTHO05D007329 3.4e-102 375.9 352 55.4
TWI73G1263 Tripterygium wilfordii HOM05D005912 ORTHO05D007329 3.4e-102 375.9 371 53.6
Sed0007504 Sechium edule HOM05D005912 ORTHO05D007329 4.4e-102 375.6 348 54.3
Sopen02g028060 Solanum pennellii HOM05D005912 ORTHO05D007329 9.9e-102 374.4 352 55.1
Cc07_g11440 Coffea canephora HOM05D005912 ORTHO05D007329 1.3e-101 374.0 337 57.0
HanXRQChr07g0192501 Helianthus annuus HOM05D005912 ORTHO05D007329 4.9e-101 372.1 368 51.4
Solyc02g083270.4 Solanum lycopersicum HOM05D005912 ORTHO05D007329 1.4e-100 370.5 352 54.8
Aa31LG6G12710 Aethionema arabicum HOM05D005912 ORTHO05D007329 9.2e-100 367.9 399 51.1
CSS0031078 Camellia sinensis var. sinensis HOM05D005912 ORTHO05D007329 9.2e-100 367.9 314 59.6
Rhsim10G0204000 Rhododendron simsii HOM05D005912 ORTHO05D007329 2.7e-99 366.3 297 60.6
Glyma.11G082400 Glycine max HOM05D005912 ORTHO05D007329 7.8e-99 364.8 286 61.9
Lj2g0008610 Lotus japonicus HOM05D005912 ORTHO05D007329 7.8e-99 364.8 338 55.6
Phvul.002G112700 Phaseolus vulgaris HOM05D005912 ORTHO05D007329 1.0e-98 364.4 362 53.0
AUR62029896 Chenopodium quinoa HOM05D005912 ORTHO05D007329 1.3e-98 364.0 350 52.0
ECA238G3446 Erigeron canadensis HOM05D005912 ORTHO05D007329 3.0e-98 362.8 365 51.8
Lsat_1_v5_gn_2_75281 Lactuca sativa HOM05D005912 ORTHO05D007329 3.9e-98 362.5 331 55.0
arahy.Tifrunner.gnm1.ann1.JJKM7S Arachis hypogaea HOM05D005912 ORTHO05D007329 1.5e-97 360.5 326 56.1
arahy.Tifrunner.gnm1.ann1.TNL2KY Arachis hypogaea HOM05D005912 ORTHO05D007329 1.5e-97 360.5 326 56.1
Lj4A227T48 Lonicera japonica HOM05D005912 ORTHO05D007329 1.6e-96 357.1 352 54.5
Sc07g0001240 Simmondsia chinensis HOM05D005912 ORTHO05D007329 2.1e-96 356.7 349 52.4
Ca_24951_v3 Cicer arietinum L. HOM05D005912 ORTHO05D007329 3.6e-96 355.9 304 59.9
Lj2A487G56 Lonicera japonica HOM05D005912 ORTHO05D007329 6.2e-96 355.1 360 52.8
BraA08t34122Z Brassica rapa HOM05D005912 ORTHO05D007329 1.4e-95 354.0 277 63.9
CDE06G1293 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 2.4e-95 353.2 359 51.0
TPR.G25119 Trifolium pratense HOM05D005912 ORTHO05D007329 4.0e-95 352.4 305 57.7
HanXRQChr14g0442051 Helianthus annuus HOM05D005912 ORTHO05D007329 6.9e-95 351.7 334 53.6
MSTRG.2738 Avicennia marina HOM05D005912 ORTHO05D007329 1.2e-94 350.9 376 50.5
Psat2g151360 Pisum sativum HOM05D005912 ORTHO05D007329 2.0e-94 350.1 302 57.9
Medtr5g023180 Medicago truncatula HOM05D005912 ORTHO05D007329 2.6e-94 349.7 302 57.9
EL10Ac5g11470 Beta vulgaris HOM05D005912 ORTHO05D007329 7.6e-94 348.2 329 53.8
AL7G15340 Arabidopsis lyrata HOM05D005912 ORTHO05D007329 4.9e-93 345.5 274 62.0
Migut.L00742 Erythranthe guttata HOM05D005912 ORTHO05D007329 4.9e-93 345.5 282 59.6
ATR0661G434 Amborella trichopoda HOM05D005912 ORTHO05D007329 8.4e-93 344.7 346 50.3
Lalb_Chr05g0212091 Lupinus albus HOM05D005912 ORTHO05D007329 5.4e-92 342.0 326 53.1
Zm00001eb002560 Zea mays HOM05D005912 ORTHO05D007329 1.6e-91 340.5 362 51.1
Os03g0131500 Oryza sativa ssp. japonica HOM05D005912 ORTHO05D007329 6.6e-90 335.1 319 55.2
AT4G35760 Arabidopsis thaliana HOM05D005912 ORTHO05D007329 1.5e-89 334.0 350 51.4
SalBow3G0555 Salvia bowleyana HOM05D005912 ORTHO05D007329 9.9e-86 321.2 369 47.7
HPP92_022166 Vanilla planifolia HOM05D005912 ORTHO05D007329 1.7e-85 320.5 283 54.8
AUR62033809 Chenopodium quinoa HOM05D005912 ORTHO05D007329 3.2e-84 316.2 263 55.9
SGA_v2.0_scaffold108G30993 Striga asiatica HOM05D005912 ORTHO05D007329 6.0e-83 312.0 362 47.2
Oeu012550.1 Olea europaea HOM05D005912 ORTHO05D007329 6.7e-82 308.5 293 53.2
CANSAT25G2212 Cannabis sativa HOM05D005912 ORTHO05D007329 1.1e-79 301.2 228 65.4
GSVIVG01002335001 Vitis vinifera HOM05D005912 ORTHO05D007329 1.1e-79 301.2 305 55.4
Cpa.g.sc6.326 Carica papaya HOM05D005912 ORTHO05D007329 7.9e-75 285.0 357 45.9
MELO3C007950.2 Cucumis melo HOM05D005912 ORTHO05D007329 2.3e-74 283.5 334 46.1
CDE03G0408 Ceratophyllum demersum HOM05D005912 ORTHO05D007329 6.2e-72 275.4 331 46.2
unitig_88.g27769 Utricularia gibba HOM05D005912 ORTHO05D007329 5.7e-65 252.3 228 55.3
CBR_g79494 Chara braunii HOM05D005912 ORTHO05D007329 1.6e-64 250.8 311 42.8
SMO119G0150 Selaginella moellendorffii HOM05D005912 ORTHO05D007329 4.8e-64 249.2 289 43.6
Mapoly0023s0120 Marchantia polymorpha HOM05D005912 ORTHO05D007329 8.2e-64 248.4 313 43.8
Pp3c3_30980 Physcomitrium patens HOM05D005912 ORTHO05D007329 3.8e-61 239.6 331 39.0
Glyma.01G161400 Glycine max HOM05D005912 ORTHO05D007329 7.9e-59 231.9 214 55.6
A08p21710 Brassica napus HOM05D000088 ORTHO05D000933 7.4e-57 225.3 327 44.3
C03p80880 Brassica napus HOM05D000088 ORTHO05D000933 9.7e-57 224.9 293 45.4
BolC3t20343H Brassica oleracea HOM05D000088 ORTHO05D000933 6.3e-56 222.2 293 45.4
Peaxi162Scf00300g00017 Petunia axillaris HOM05D005912 ORTHO05D007329 1.4e-55 221.1 254 51.2
BcaC01g00519 Brassica carinata HOM05D005912 ORTHO05D007329 1.5e-54 217.6 289 47.1
Migut.H02191 Erythranthe guttata HOM05D005912 ORTHO05D007329 2.5e-52 210.3 339 39.2
BcaNung05729 Brassica carinata HOM05D005912 ORTHO05D007329 7.9e-51 205.3 256 48.8
VMungo1215G0927 Vigna mungo HOM05D005912 ORTHO05D007329 3.9e-50 203.0 240 49.2
SGA_v2.0_scaffold132G34545 Striga asiatica HOM05D005912 ORTHO05D007329 1.4e-47 194.5 245 46.5
DCAR_011589 Daucus carota HOM05D005912 ORTHO05D007329 4.1e-47 193.0 217 50.2
MCO13G425 Micromonas commoda HOM05D005912 ORTHO05D007329 1.2e-46 191.4 323 37.5
Cre12.g493150 Chlamydomonas reinhardtii HOM05D005912 ORTHO05D007329 6.1e-43 179.1 310 34.2
PRCOL_00003732 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 5.2e-42 176.0 288 38.5
SGA_v2.0_scaffold132G34543 Striga asiatica HOM05D005912 ORTHO05D007329 5.9e-38 162.5 111 63.1
Actinidia22932 Actinidia chinensis HOM05D005912 ORTHO05D007329 8.5e-37 158.7 189 45.0
SEGI_31957 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 5.5e-36 156.0 166 45.2
MSTRG.15589 Avicennia marina HOM05D005912 ORTHO05D007329 1.4e-34 151.4 101 68.3
Pp3c1_24560 Physcomitrium patens HOM05D005912 ORTHO05D007329 2.6e-33 147.1 146 46.6
Lj2A933T26 Lonicera japonica HOM05D005912 ORTHO05D007329 1.2e-30 138.3 133 56.4
arahy.Tifrunner.gnm1.ann1.SP2XL4 Arachis hypogaea HOM05D005912 ORTHO05D007329 4.7e-27 126.3 137 51.1
AagrBONN_evm.TU.Sc2ySwM_340.180 Anthoceros agrestis HOM05D005912 ORTHO05D007329 9.1e-23 112.1 204 32.4
AagrBONN_evm.TU.Sc2ySwM_228.1421 Anthoceros agrestis HOM05D005912 ORTHO05D007329 2.9e-21 107.1 160 36.2
PRCOL_00002964 Prasinoderma coloniale HOM05D005912 ORTHO05D007329 1.1e-20 105.1 116 45.7
Hma1.2p1_4017F.1_g338140 Hydrangea macrophylla HOM05D005912 ORTHO05D007329 9.5e-20 102.1 98 55.1
Peaxi162Scf56132g00003 Petunia axillaris HOM05D005912 ORTHO05D007329 1.0e-18 98.6 64 67.2
MD15G1236200 Malus domestica HOM05D005912 ORTHO05D007329 2.6e-17 94.0 64 64.1
FAN28G1872 Fragaria x ananassa HOM05D005912 ORTHO05D007329 7.5e-17 92.4 63 66.7
Gohir.D03G004450 Gossypium hirsutum HOM05D005912 ORTHO05D007329 2.8e-16 90.5 63 60.3
SEGI_22324 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 3.7e-16 90.1 63 60.3
Lj2P933T24 Lonicera japonica HOM05D005912 ORTHO05D007329 2.7e-14 84.0 53 64.2
MCO11G735 Micromonas commoda HOM05D005912 ORTHO05D007329 4.3e-12 76.6 99 37.4
SEGI_06824 Sequoiadendron giganteum HOM05D005912 ORTHO05D007329 1.6e-11 74.7 125 36.0
Lj2A1074G31 Lonicera japonica HOM05D005912 ORTHO05D007329 2.8e-11 73.9 80 52.5
unitig_88.g27770 Utricularia gibba HOM05D005912 ORTHO05D007329 2.3e-10 70.9 52 61.5
RcHm_v2.0_Chr4g0418411 Rosa chinensis HOM05D005912 ORTHO05D007329 5.4e-07 59.7 60 56.7
RcHm_v2.0_Chr7g0224811 Rosa chinensis HOM05D005912 ORTHO05D007329 1.6e-06 58.2 60 56.7


User provided reference genes

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