Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 0.0e+00 1150.2 571 100.0
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 2.2e-297 1025.0 577 88.9
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 1.9e-184 649.8 583 59.3
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 3.6e-183 645.6 577 57.7
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 8.6e-177 624.4 573 56.9
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 1.2e-175 620.5 576 56.8
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.1e-174 617.5 577 56.2
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 1.4e-174 617.1 577 56.0
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 2.6e-173 612.8 574 55.6
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 9.9e-173 610.9 594 55.9
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 8.4e-172 607.8 569 56.2
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 1.4e-171 607.1 588 55.1
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 2.4e-171 606.3 589 54.2
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 2.7e-170 602.8 574 55.1
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 6.0e-170 601.7 578 55.7
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 1.0e-169 600.9 578 55.5
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 1.0e-169 600.9 568 55.5
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 1.3e-169 600.5 567 56.4
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 5.1e-169 598.6 577 54.6
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 8.7e-169 597.8 607 53.9
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 1.1e-168 597.4 566 55.5
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 1.5e-168 597.0 564 56.0
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 3.6e-167 592.4 566 53.9
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 3.6e-167 592.4 571 53.6
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 4.8e-167 592.0 578 54.3
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 6.2e-167 591.7 566 56.5
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 2.4e-166 589.7 570 55.6
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 1.2e-165 587.4 570 54.7
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 2.0e-165 586.6 567 54.5
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 2.6e-165 586.3 566 54.8
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 2.6e-165 586.3 587 52.6
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 2.6e-165 586.3 580 54.8
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 2.6e-165 586.3 621 52.3
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 3.8e-164 582.4 567 54.1
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 4.9e-164 582.0 577 53.6
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 1.4e-163 580.5 566 54.4
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 2.4e-163 579.7 571 52.7
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 3.2e-163 579.3 574 53.8
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 7.1e-163 578.2 566 53.7
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 3.5e-162 575.9 586 52.0
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 6.0e-162 575.1 571 52.7
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 5.1e-161 572.0 576 54.0
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.9e-160 570.1 545 54.9
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.9e-160 570.1 541 56.4
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 2.5e-160 569.7 570 54.2
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 4.3e-160 568.9 576 53.3
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 3.6e-159 565.8 579 52.5
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 2.4e-158 563.1 579 51.1
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 3.1e-158 562.8 580 52.6
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 9.0e-158 561.2 587 51.3
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 1.2e-157 560.8 585 52.1
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 2.6e-157 559.7 583 52.5
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 3.4e-157 559.3 670 47.2
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 3.4e-157 559.3 565 53.5
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 4.5e-157 558.9 568 52.8
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 9.9e-157 557.8 578 52.4
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 1.3e-156 557.4 571 52.9
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 4.9e-156 555.4 579 52.5
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 2.1e-154 550.1 568 51.8
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 1.3e-151 540.8 573 50.4
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 2.6e-149 533.1 623 47.2
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 4.5e-149 532.3 545 53.0
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 5.8e-149 531.9 623 47.0
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 6.7e-145 518.5 544 51.8
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.1e-142 511.1 513 53.4
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 4.1e-142 509.2 592 48.3
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 2.5e-139 500.0 518 50.8
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 4.6e-138 495.7 534 50.6
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 4.8e-135 485.7 515 51.1
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 1.5e-133 480.7 519 50.9
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 5.0e-132 475.7 575 47.8
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 8.2e-127 458.4 570 46.0
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 5.0e-124 449.1 595 44.5
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 1.1e-123 448.0 455 53.0
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 4.1e-118 429.5 372 59.1
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.0e-116 424.9 584 42.3
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 6.7e-113 412.1 512 46.1
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.1e-110 404.8 598 40.8
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 1.2e-109 401.4 426 54.9
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 4.5e-109 399.4 351 59.0
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 8.8e-105 385.2 435 49.0
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 9.1e-102 375.2 561 38.9
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 2.6e-88 330.5 380 50.5
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 6.4e-87 325.9 276 60.9
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 7.0e-86 322.4 392 50.3
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 1.2e-85 321.6 459 42.7
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 1.6e-85 321.2 286 58.0
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 8.6e-84 315.5 276 58.3
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 6.6e-76 289.3 460 41.7
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 2.4e-70 270.8 285 53.3
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 1.4e-62 245.0 211 54.5
Thecc.07G156300 Theobroma cacao HOM05D007146 ORTHO05D008971 7.1e-62 242.7 264 47.7
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 1.1e-57 228.8 240 54.6
Ciclev10022203m.g Citrus clementina HOM05D007146 ORTHO05D008971 1.0e-52 212.2 226 50.4
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 7.9e-45 186.0 172 60.5
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.9e-38 164.9 117 59.0
DCAR_002379 Daucus carota HOM05D007146 ORTHO05D008971 1.9e-38 164.9 232 42.2
Ca_03695_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.4e-38 164.5 210 42.9
Ca_03700_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 2.4e-38 164.5 210 42.9
Ah.06g187020 Amaranthus hybridus HOM05D007146 ORTHO05D008971 1.8e-36 158.3 203 44.3
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 8.7e-36 156.0 121 57.0
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 1.5e-32 145.2 118 55.1
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.9e-30 138.3 191 44.5
Sc07g0003080 Simmondsia chinensis HOM05D007146 ORTHO05D008971 1.6e-29 135.2 94 66.0
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 4.8e-26 123.6 137 53.3
Haze_08528 Corylus avellana HOM05D007146 ORTHO05D008971 1.5e-16 92.0 147 42.9
MBI02_g40068_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 1.2e-13 82.4 153 36.6
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.4e-09 68.2 64 50.0
Cfa023972 Carpinus fangiana HOM05D007146 ORTHO05D008971 4.2e-06 57.4 154 27.9


User provided reference genes

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