Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2209 Papaver somniferum HOM05D010375 ORTHO05D000233 3.7e-79 298.1 148 100.0
PSO349G0027 Papaver somniferum HOM05D010375 ORTHO05D000233 1.1e-64 250.0 127 97.6
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 1.1e-64 250.0 127 97.6
PSO700G0133 Papaver somniferum HOM05D010375 ORTHO05D015177 1.1e-64 250.0 127 97.6
PSO717G0128 Papaver somniferum HOM05D010375 ORTHO05D015177 1.1e-64 250.0 127 97.6
PSO724G0047 Papaver somniferum HOM05D010375 ORTHO05D000233 1.1e-64 250.0 127 97.6
PSO724G0607 Papaver somniferum HOM05D010375 ORTHO05D000233 1.1e-64 250.0 127 97.6
PSO063G4994 Papaver somniferum HOM05D010375 ORTHO05D000233 3.5e-45 185.3 91 96.7
PSO675G2505 Papaver somniferum HOM05D010375 ORTHO05D000233 3.4e-40 168.7 86 93.0
PSO170G4450 Papaver somniferum HOM05D010375 ORTHO05D000233 2.1e-34 149.4 77 94.8
PSO782G4622 Papaver somniferum HOM05D010879 ORTHO05D010294 2.4e-14 82.8 119 33.6
HanXRQChr11g0349201 Helianthus annuus HOM05D008452 ORTHO05D010294 3.5e-13 79.0 143 30.8
HanXRQChr17g0547341 Helianthus annuus HOM05D008452 ORTHO05D010294 3.5e-13 79.0 143 30.8
HanXRQChr03g0077561 Helianthus annuus HOM05D008452 ORTHO05D010294 6.0e-13 78.2 143 30.8
HanXRQChr05g0158771 Helianthus annuus HOM05D008452 ORTHO05D010294 7.8e-13 77.8 118 34.7
HanXRQChr09g0253291 Helianthus annuus HOM05D008452 ORTHO05D000233 7.8e-13 77.8 118 34.7
HanXRQChr13g0403311 Helianthus annuus HOM05D008452 ORTHO05D000233 7.8e-13 77.8 118 34.7
HanXRQChr01g0011531 Helianthus annuus HOM05D008452 ORTHO05D010294 8.6e-12 74.3 110 34.5
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.5e-11 73.6 107 34.6
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.5e-11 73.6 107 34.6
CANSAT25G2736 Cannabis sativa HOM05D000539 ORTHO05D000233 1.9e-11 73.2 111 40.5
CANSAT35G1647 Cannabis sativa HOM05D000539 ORTHO05D000233 1.9e-11 73.2 111 40.5
PSO675G7387 Papaver somniferum HOM05D000539 ORTHO05D000233 3.3e-11 72.4 121 36.4
PSO541G5385 Papaver somniferum HOM05D000539 ORTHO05D000233 4.3e-11 72.0 121 36.4
Lsat_1_v5_gn_1_115440 Lactuca sativa HOM05D008452 ORTHO05D010294 5.6e-11 71.6 111 33.3
Lsat_1_v5_gn_9_89720 Lactuca sativa HOM05D008452 ORTHO05D010294 7.3e-11 71.2 116 32.8
CANSAT01G2601 Cannabis sativa HOM05D000539 ORTHO05D000233 2.1e-10 69.7 112 40.2
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.2e-10 68.2 108 36.1
Lsat_1_v5_gn_1_8180 Lactuca sativa HOM05D008452 ORTHO05D010294 1.1e-09 67.4 88 35.2
CANSAT11G2234 Cannabis sativa HOM05D000539 ORTHO05D000233 1.4e-09 67.0 113 36.3
GSVIVG01000866001 Vitis vinifera HOM05D000539 ORTHO05D000233 1.4e-09 67.0 128 35.2
CANSAT25G3580 Cannabis sativa HOM05D000539 ORTHO05D000233 1.8e-09 66.6 113 36.3
Lsat_1_v5_gn_8_116720 Lactuca sativa HOM05D008452 ORTHO05D010294 2.4e-09 66.2 120 30.0
CANSAT54G2622 Cannabis sativa HOM05D000539 ORTHO05D000233 3.1e-09 65.9 106 39.6
Lsat_1_v5_gn_6_60260 Lactuca sativa HOM05D008452 ORTHO05D010294 3.1e-09 65.9 88 33.0
Lsat_1_v5_gn_4_171061 Lactuca sativa HOM05D008452 ORTHO05D010294 5.2e-09 65.1 88 35.2
Lsat_1_v5_gn_5_147380 Lactuca sativa HOM05D008452 ORTHO05D010294 5.2e-09 65.1 127 28.3
RcHm_v2.0_Chr4g0401831 Rosa chinensis HOM05D000539 ORTHO05D000233 5.2e-09 65.1 89 38.2
RcHm_v2.0_Chr5g0071741 Rosa chinensis HOM05D000539 ORTHO05D000233 5.2e-09 65.1 89 38.2
Hma1.2p1_2026F.1_g311550 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 6.8e-09 64.7 116 33.6
Hma1.2p1_1437F.1_g283240 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.2e-08 63.9 132 31.1
CANSAT54G0698 Cannabis sativa HOM05D000539 ORTHO05D000233 1.5e-08 63.5 99 39.4
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 3.4e-08 62.4 84 39.3
RcHm_v2.0_Chr1g0364031 Rosa chinensis HOM05D000539 ORTHO05D000233 2.2e-07 59.7 101 37.6
Lsat_1_v5_gn_3_124700 Lactuca sativa HOM05D008452 ORTHO05D010294 2.9e-07 59.3 121 28.9
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 3.8e-07 58.9 97 36.1
Ciclev10023560m.g Citrus clementina HOM05D000539 ORTHO05D000233 3.8e-07 58.9 85 35.3
Lsat_1_v5_gn_3_84721 Lactuca sativa HOM05D008452 ORTHO05D010294 8.4e-07 57.8 110 28.2
TPR.G11532 Trifolium pratense HOM05D007793 ORTHO05D010104 1.1e-06 57.4 114 32.5
Ciclev10024249m.g Citrus clementina HOM05D000539 ORTHO05D000233 1.4e-06 57.0 82 35.4
TPR.G11501 Trifolium pratense HOM05D007793 ORTHO05D010104 1.9e-06 56.6 114 33.3
FvH4_4g04601 Fragaria vesca HOM05D000539 ORTHO05D000233 3.2e-06 55.8 115 33.0
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 5.4e-06 55.1 105 33.3
VMungo0251G2025 Vigna mungo HOM05D007793 ORTHO05D010104 7.1e-06 54.7 92 37.0
FAN01G1775 Fragaria x ananassa HOM05D000539 ORTHO05D000233 9.2e-06 54.3 110 29.1
RcHm_v2.0_Chr1g0318231 Rosa chinensis HOM05D000539 ORTHO05D000233 9.2e-06 54.3 105 33.3


User provided reference genes

Program Settings