Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 2.7e-86 322.0 165 100.0
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 1.7e-77 292.7 166 92.8
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 4.3e-36 155.2 174 54.6
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 8.1e-35 151.0 174 52.3
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 1.3e-32 143.7 175 49.1
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 1.4e-31 140.2 175 49.7
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 2.4e-31 139.4 168 52.4
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 9.3e-31 137.5 172 51.2
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 1.2e-30 137.1 174 49.4
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.1e-30 136.3 165 52.1
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 3.9e-29 132.1 171 49.7
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.9e-29 132.1 170 51.2
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.9e-29 132.1 167 50.3
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.9e-29 132.1 167 50.3
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 5.1e-29 131.7 167 52.7
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 8.7e-29 131.0 169 50.3
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 8.7e-29 131.0 169 50.3
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.1e-28 130.6 170 50.6
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 1.1e-28 130.6 173 50.9
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 1.9e-28 129.8 165 53.9
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 9.6e-28 127.5 174 50.0
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 1.3e-27 127.1 174 50.6
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.3e-27 127.1 167 46.1
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.3e-27 127.1 167 46.1
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 1.6e-27 126.7 172 49.4
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 2.1e-27 126.3 172 48.8
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 2.8e-27 125.9 172 44.8
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 6.2e-27 124.8 165 47.9
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 6.2e-27 124.8 170 48.8
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 1.1e-26 124.0 172 47.1
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 1.4e-26 123.6 173 48.0
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 1.8e-26 123.2 174 44.3
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.8e-26 123.2 171 49.1
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.4e-26 122.9 164 45.7
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.1e-26 122.5 170 48.2
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 4.0e-26 122.1 166 47.6
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 5.3e-26 121.7 166 47.6
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 6.9e-26 121.3 169 45.0
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 9.0e-26 120.9 165 44.2
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 9.0e-26 120.9 166 47.6
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.2e-25 120.6 166 46.4
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 1.2e-25 120.6 165 48.5
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 1.5e-25 120.2 172 47.1
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 1.5e-25 120.2 167 45.5
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.0e-25 119.8 174 46.0
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 2.0e-25 119.8 167 47.3
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.6e-25 119.4 163 48.5
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 3.4e-25 119.0 181 44.8
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 3.4e-25 119.0 172 46.5
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 7.6e-25 117.9 172 46.5
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 7.6e-25 117.9 166 45.2
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 9.9e-25 117.5 168 43.5
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 1.7e-24 116.7 166 46.4
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 2.2e-24 116.3 174 43.7
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 3.8e-24 115.5 173 44.5
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 4.9e-24 115.2 167 44.3
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 4.9e-24 115.2 173 45.7
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 6.4e-24 114.8 162 45.1
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 6.4e-24 114.8 171 45.0
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 5.4e-23 111.7 182 41.2
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 1.2e-22 110.5 173 43.9
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 1.6e-22 110.2 163 43.6
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 3.5e-22 109.0 177 44.1
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 4.6e-22 108.6 172 43.0
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 4.6e-22 108.6 165 42.4
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 1.8e-21 106.7 166 41.6
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.3e-21 106.3 172 43.6
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.0e-21 105.9 172 42.4
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 3.0e-21 105.9 171 43.3
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 3.9e-21 105.5 172 42.4
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 3.9e-21 105.5 172 42.4
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 5.1e-21 105.1 166 44.6
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 6.7e-21 104.8 168 41.7
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 6.7e-21 104.8 163 43.6
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 1.5e-20 103.6 172 42.4
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 1.5e-20 103.6 171 41.5
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 1.9e-20 103.2 170 38.2
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 1.9e-20 103.2 187 38.0
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 1.9e-20 103.2 170 43.5
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.5e-20 102.8 172 42.4
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 3.3e-20 102.4 163 44.2
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 7.4e-20 101.3 171 40.4
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 9.6e-20 100.9 170 41.8
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.6e-19 100.1 166 42.2
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 2.1e-19 99.8 166 41.0
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 2.1e-19 99.8 171 40.9
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 2.8e-19 99.4 171 42.7
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 3.6e-19 99.0 222 34.2
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 3.6e-19 99.0 171 42.1
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 4.8e-19 98.6 167 44.3
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 6.2e-19 98.2 165 40.6
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 6.2e-19 98.2 143 46.2
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 8.1e-19 97.8 221 34.4
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 8.1e-19 97.8 166 39.2
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 1.4e-18 97.1 196 39.3
AUR62015707 Chenopodium quinoa HOM05D005769 ORTHO05D006851 1.8e-18 96.7 161 42.9
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 2.4e-18 96.3 189 37.6
AUR62020499 Chenopodium quinoa HOM05D005769 ORTHO05D006851 2.4e-18 96.3 165 43.6
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 2.4e-18 96.3 179 38.5
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 2.4e-18 96.3 165 39.4
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 3.1e-18 95.9 189 37.0
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 3.1e-18 95.9 188 38.3
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 1.2e-17 94.0 201 38.3
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 1.5e-17 93.6 189 36.5
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 1.5e-17 93.6 189 36.5
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 2.0e-17 93.2 155 40.6
Phvul.006G038800 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 2.0e-17 93.2 160 41.2
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 2.6e-17 92.8 187 36.9
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 2.6e-17 92.8 167 37.7
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 4.5e-17 92.0 173 39.3
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 5.8e-17 91.7 172 39.0
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 9.9e-17 90.9 145 42.8
SalBow7G1695 Salvia bowleyana HOM05D005769 ORTHO05D006851 9.9e-17 90.9 164 43.9
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 2.2e-16 89.7 181 36.5
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 3.8e-16 89.0 184 38.0
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 4.9e-16 88.6 217 33.6
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 4.9e-16 88.6 144 43.8
SGA_v2.0_scaffold8G04301 Striga asiatica HOM05D005769 ORTHO05D006851 2.1e-14 83.2 158 36.1
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 4.6e-14 82.0 157 38.2
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 6.0e-14 81.6 168 38.7
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 1.8e-13 80.1 198 35.4
Ah.04g165680 Amaranthus hybridus HOM05D005769 ORTHO05D006851 2.3e-13 79.7 176 35.2
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 8.7e-13 77.8 172 36.6
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.1e-12 77.4 171 36.3
Lalb_Chr10g0106921 Lupinus albus HOM05D005769 ORTHO05D006851 9.6e-12 74.3 128 42.2
HanXRQChr05g0159131 Helianthus annuus HOM05D005769 ORTHO05D006851 1.3e-11 73.9 163 37.4
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 4.8e-11 72.0 163 33.1
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 8.1e-11 71.2 159 35.2
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 3.1e-10 69.3 171 32.7
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 5.8e-09 65.1 169 30.8
HPP92_012395 Vanilla planifolia HOM05D005769 ORTHO05D006851 6.5e-08 61.6 156 30.8
HPP92_012322 Vanilla planifolia HOM05D005769 ORTHO05D006851 3.2e-07 59.3 156 30.8
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 7.9e-06 54.7 153 31.4


User provided reference genes

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