Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 2.0e-244 848.6 405 100.0
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 2.0e-244 848.6 405 100.0
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 3.6e-217 758.1 403 88.3
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 6.1e-217 757.3 403 87.8
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 7.9e-217 756.9 403 88.6
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 1.3e-216 756.1 403 88.6
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 1.8e-216 755.7 401 88.5
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 2.2e-214 748.8 403 88.3
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 3.7e-214 748.0 403 87.1
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 1.2e-212 743.0 403 87.8
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.5e-212 742.7 403 87.1
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 2.0e-212 742.3 403 86.4
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 2.6e-212 741.9 403 86.8
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 2.6e-212 741.9 403 86.8
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 2.6e-212 741.9 401 85.5
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 5.9e-212 740.7 404 87.6
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 7.7e-212 740.3 390 89.5
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 1.7e-211 739.2 403 85.9
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 1.7e-211 739.2 415 85.5
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 2.2e-211 738.8 401 87.5
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 2.2e-211 738.8 403 86.6
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 3.8e-211 738.0 403 86.6
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 3.8e-211 738.0 403 86.8
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 5.0e-211 737.6 402 85.8
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 6.5e-211 737.3 409 85.3
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 8.5e-211 736.9 405 85.7
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 8.5e-211 736.9 418 84.4
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 8.5e-211 736.9 403 86.1
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 8.5e-211 736.9 404 85.6
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 1.1e-210 736.5 402 86.6
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 1.1e-210 736.5 404 85.9
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 1.4e-210 736.1 402 85.8
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 5.5e-210 734.2 405 85.9
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 1.6e-209 732.6 404 84.9
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 1.6e-209 732.6 404 85.4
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 3.6e-209 731.5 403 86.8
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 4.6e-209 731.1 403 84.4
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 4.6e-209 731.1 401 86.0
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 6.1e-209 730.7 404 84.7
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 7.9e-209 730.3 404 85.4
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 1.0e-208 729.9 401 84.0
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 1.0e-208 729.9 403 86.4
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 2.3e-208 728.8 402 84.6
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 1.1e-207 726.5 403 85.1
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 2.0e-207 725.7 390 87.4
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 2.0e-207 725.7 402 85.1
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 2.0e-207 725.7 401 84.0
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 3.3e-207 724.9 403 84.4
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 9.7e-207 723.4 404 84.2
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 1.7e-206 722.6 404 84.4
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 8.2e-206 720.3 397 85.9
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.1e-205 719.9 403 84.4
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 1.8e-205 719.2 397 84.1
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 2.4e-205 718.8 401 83.8
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 5.3e-205 717.6 412 82.5
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.2e-204 716.5 409 83.6
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 3.4e-204 714.9 410 84.1
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 7.7e-204 713.8 401 84.5
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 2.2e-203 712.2 402 82.6
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 2.2e-203 712.2 402 84.1
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 3.8e-203 711.4 390 86.4
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 3.8e-203 711.4 398 84.4
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 5.0e-203 711.1 402 83.8
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 1.4e-202 709.5 433 79.0
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 1.4e-202 709.5 391 86.2
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 1.9e-202 709.1 391 85.4
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 2.5e-202 708.8 398 83.2
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 5.5e-202 707.6 403 81.4
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 1.2e-201 706.4 403 81.6
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 1.6e-201 706.1 403 81.9
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 1.6e-201 706.1 432 78.5
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.1e-201 705.7 401 83.3
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 2.1e-201 705.7 399 82.7
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.4e-200 703.0 403 81.1
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.3e-200 702.2 401 82.8
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 8.8e-200 700.3 403 81.1
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 4.4e-199 698.0 416 80.3
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 3.7e-198 694.9 403 82.6
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 4.8e-198 694.5 405 81.7
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 1.4e-197 693.0 390 83.6
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 5.3e-197 691.0 402 81.3
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 2.0e-196 689.1 403 80.1
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.6e-196 688.7 403 81.1
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 9.4e-194 680.2 388 82.0
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 9.4e-194 680.2 388 82.0
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 3.6e-193 678.3 399 80.5
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 1.5e-191 672.9 403 77.7
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 2.0e-191 672.5 390 81.5
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 3.7e-190 668.3 420 78.1
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 6.3e-190 667.5 366 85.2
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 4.1e-189 664.8 404 80.4
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 9.1e-189 663.7 403 77.9
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.2e-188 663.3 389 81.0
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 3.8e-187 658.3 358 85.2
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 8.5e-187 657.1 411 77.1
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 3.2e-186 655.2 387 79.8
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 6.1e-185 651.0 389 79.2
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 1.4e-184 649.8 389 78.9
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.3e-184 649.0 382 80.6
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 1.5e-183 646.4 389 78.4
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 4.4e-183 644.8 377 80.1
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 4.8e-182 641.3 398 76.1
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 3.5e-180 635.2 403 77.7
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 1.9e-178 629.4 410 76.3
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 9.5e-178 627.1 342 84.8
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 2.7e-172 609.0 402 74.1
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 2.3e-171 605.9 358 79.9
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 2.5e-170 602.4 392 71.7
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 2.3e-168 595.9 399 71.4
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 2.3e-168 595.9 394 71.3
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 4.0e-168 595.1 325 84.6
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 5.4e-165 584.7 395 69.4
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 3.9e-163 578.6 397 70.8
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 4.7e-161 571.6 305 88.2
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 1.3e-158 563.5 304 86.5
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 4.9e-158 561.6 346 77.5
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.9e-154 549.7 305 85.6
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 8.3e-150 534.3 393 64.9
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 1.2e-148 530.4 399 63.7
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 9.9e-119 431.0 241 83.8
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 1.1e-106 391.0 266 68.8
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 2.1e-100 370.2 208 85.6
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 1.1e-90 337.8 184 84.2
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 4.1e-88 329.3 171 88.3
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 7.2e-85 318.5 371 49.9
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.8e-83 313.9 218 73.9
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 1.4e-80 304.3 160 85.6
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 1.8e-80 303.9 224 66.1
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 9.1e-80 301.6 434 40.1
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 6.3e-73 278.9 146 87.0
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 2.3e-59 233.8 172 65.1
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 6.8e-59 232.3 146 76.0
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 6.8e-43 179.1 190 51.6
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 5.1e-30 136.3 72 87.5
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 5.3e-19 99.8 207 38.6
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 4.2e-16 90.1 275 28.0


User provided reference genes

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