Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1942 Papaver somniferum HOM05D006797 ORTHO05D007696 7.0e-54 213.8 114 100.0
PSO541G4265 Papaver somniferum HOM05D006797 ORTHO05D007696 2.0e-53 212.2 114 99.1
TAR626G0010 Trochodendron aralioides HOM05D006797 ORTHO05D007696 8.1e-26 120.6 121 62.8
Manes.03G071800 Manihot esculenta HOM05D006797 ORTHO05D007696 1.5e-24 116.3 115 60.0
AUR62042807 Chenopodium quinoa HOM05D006797 ORTHO05D007696 2.9e-23 112.1 111 58.6
Cc09_g04790 Coffea canephora HOM05D006797 ORTHO05D007696 8.4e-23 110.5 116 56.0
SGA_v2.0_scaffold60G20810 Striga asiatica HOM05D006797 ORTHO05D007696 1.9e-22 109.4 116 52.6
Ah.15g091850 Amaranthus hybridus HOM05D006797 ORTHO05D007696 3.2e-22 108.6 117 57.3
Sc24g0002860 Simmondsia chinensis HOM05D006797 ORTHO05D007696 1.2e-21 106.7 117 56.4
MSTRG.8842 Avicennia marina HOM05D006797 ORTHO05D007696 1.6e-21 106.3 116 56.0
SGA_v2.0_scaffold44G16576 Striga asiatica HOM05D001006 ORTHO05D000868 3.5e-21 105.1 115 55.7
ECA248G3234 Erigeron canadensis HOM05D006797 ORTHO05D007696 4.6e-21 104.8 114 56.1
PGR042G0784 Punica granatum HOM05D006797 ORTHO05D007696 1.7e-20 102.8 124 51.6
EL10Ac7g17249 Beta vulgaris HOM05D006797 ORTHO05D007696 2.3e-20 102.4 117 55.6
ClCG01G025860 Citrullus lanatus HOM05D006797 ORTHO05D007696 5.1e-20 101.3 121 52.9
Migut.F00519 Erythranthe guttata HOM05D006797 ORTHO05D007696 1.1e-19 100.1 116 55.2
TPR.G27392 Trifolium pratense HOM05D006797 ORTHO05D007696 1.5e-19 99.8 122 57.4
Hma1.2p1_1220F.1_g268030 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 1.9e-19 99.4 121 53.7
Ciclev10017227m.g Citrus clementina HOM05D006797 ORTHO05D007696 2.5e-19 99.0 122 55.7
Lalb_Chr07g0188191 Lupinus albus HOM05D006797 ORTHO05D007696 2.5e-19 99.0 119 56.3
Sed0011432 Sechium edule HOM05D006797 ORTHO05D007696 3.3e-19 98.6 119 53.8
CSS0049260 Camellia sinensis var. sinensis HOM05D006797 ORTHO05D007696 4.3e-19 98.2 126 51.6
Lsat_1_v5_gn_3_103300 Lactuca sativa HOM05D006797 ORTHO05D007696 5.6e-19 97.8 105 55.2
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 7.3e-19 97.4 124 51.6
Oeu036765.2 Olea europaea HOM05D006797 ORTHO05D007696 1.6e-18 96.3 125 49.6
HanXRQChr12g0377351 Helianthus annuus HOM05D006797 ORTHO05D007696 2.1e-18 95.9 114 54.4
TWI38G0311 Tripterygium wilfordii HOM05D006797 ORTHO05D007696 2.8e-18 95.5 117 53.8
Duzib211G0055 Durio zibethinus HOM05D006797 ORTHO05D007696 3.6e-18 95.1 129 51.9
Psat7g087040 Pisum sativum HOM05D006797 ORTHO05D007696 3.6e-18 95.1 122 50.8
Phvul.002G187600 Phaseolus vulgaris HOM05D006797 ORTHO05D007696 4.8e-18 94.7 119 52.9
Prupe.4G119300 Prunus persica HOM05D006797 ORTHO05D007696 4.8e-18 94.7 120 52.5
MELO3C007002.2 Cucumis melo HOM05D006797 ORTHO05D007696 1.1e-17 93.6 121 47.1
CAN.G809.30 Capsicum annuum HOM05D006797 ORTHO05D007696 2.4e-17 92.4 116 54.3
Solyc02g082020.3 Solanum lycopersicum HOM05D006797 ORTHO05D007696 2.4e-17 92.4 115 53.9
CiPaw.10G107100 Carya illinoinensis HOM05D006797 ORTHO05D007696 3.1e-17 92.0 118 51.7
RcHm_v2.0_Chr5g0021541 Rosa chinensis HOM05D006797 ORTHO05D007696 4.0e-17 91.7 121 52.1
Glyma.08G089600 Glycine max HOM05D006797 ORTHO05D007696 5.3e-17 91.3 119 53.8
Sopen02g026660 Solanum pennellii HOM05D006797 ORTHO05D007696 5.3e-17 91.3 115 53.0
Glyma.05G134500 Glycine max HOM05D006797 ORTHO05D007696 6.9e-17 90.9 121 52.1
QL11p011767 Quercus lobata HOM05D006797 ORTHO05D007696 6.9e-17 90.9 122 50.0
arahy.Tifrunner.gnm1.ann1.30I9D2 Arachis hypogaea HOM05D006797 ORTHO05D007696 9.0e-17 90.5 115 54.8
arahy.Tifrunner.gnm1.ann1.3X9X11 Arachis hypogaea HOM05D006797 ORTHO05D007696 9.0e-17 90.5 115 54.8
CsaV3_6G053080 Cucumis sativus L. HOM05D006797 ORTHO05D007696 9.0e-17 90.5 122 47.5
THA.LOC104812696 Tarenaya hassleriana HOM05D006797 ORTHO05D007696 1.2e-16 90.1 126 51.6
Medtr4g094782 Medicago truncatula HOM05D006797 ORTHO05D007696 2.0e-16 89.4 120 50.8
Nitab4.5_0003902g0030 Nicotiana tabacum HOM05D006797 ORTHO05D007696 2.6e-16 89.0 116 53.4
SalBow3G3973 Salvia bowleyana HOM05D006797 ORTHO05D007696 2.6e-16 89.0 113 51.3
VMungo0251G2933 Vigna mungo HOM05D006797 ORTHO05D007696 2.6e-16 89.0 105 55.2
GSVIVG01012170001 Vitis vinifera HOM05D006797 ORTHO05D007696 2.6e-16 89.0 123 48.8
PGSC0003DMG400007337 Solanum tuberosum HOM05D006797 ORTHO05D007696 3.4e-16 88.6 115 51.3
CDE05G1867 Ceratophyllum demersum HOM05D006797 ORTHO05D007696 4.5e-16 88.2 119 48.7
Cpa.g.sc30.90 Carica papaya HOM05D006797 ORTHO05D007696 5.8e-16 87.8 123 54.5
MD10G1226000 Malus domestica HOM05D006797 ORTHO05D007696 5.8e-16 87.8 120 53.3
Hund23985 Selenicereus undatus HOM05D006797 ORTHO05D007696 5.8e-16 87.8 116 52.6
Dinv03172 Davidia involucrata HOM05D006797 ORTHO05D007696 7.6e-16 87.4 127 48.0
CANSAT35G2044 Cannabis sativa HOM05D006797 ORTHO05D007696 9.9e-16 87.0 123 46.3
Peaxi162Scf00036g02019 Petunia axillaris HOM05D006797 ORTHO05D007696 9.9e-16 87.0 116 55.2
Gorai.010G130400 Gossypium raimondii HOM05D006797 ORTHO05D007696 2.2e-15 85.9 126 48.4
Nn1g05854 Nelumbo nucifera HOM05D006797 ORTHO05D007696 2.2e-15 85.9 118 50.8
Gohir.A06G110200 Gossypium hirsutum HOM05D006797 ORTHO05D007696 2.9e-15 85.5 126 48.4
Potri.003G155400 Populus trichocarpa HOM05D006797 ORTHO05D007696 2.9e-15 85.5 120 44.2
Ca_18220_v3 Cicer arietinum L. HOM05D006797 ORTHO05D007696 6.4e-15 84.3 124 50.8
Nitab4.5_0000632g0020 Nicotiana tabacum HOM05D006797 ORTHO05D007696 6.4e-15 84.3 115 50.4
Gohir.D06G114100 Gossypium hirsutum HOM05D006797 ORTHO05D007696 8.4e-15 84.0 126 47.6
Rhsim13G0134800 Rhododendron simsii HOM05D006797 ORTHO05D007696 1.1e-14 83.6 129 44.2
Aa31LG6G12300 Aethionema arabicum HOM05D006797 ORTHO05D007696 1.9e-14 82.8 118 50.0
A07p09570 Brassica napus HOM05D006797 ORTHO05D007696 5.4e-14 81.3 114 52.6
BraA07t28751Z Brassica rapa HOM05D006797 ORTHO05D007696 5.4e-14 81.3 114 52.6
Lj4g0013366 Lotus japonicus HOM05D006797 ORTHO05D007696 1.2e-13 80.1 100 51.0
Atru.chr10.261 Acer truncatum HOM05D006797 ORTHO05D007696 1.6e-13 79.7 121 43.8
FAN21G4013 Fragaria x ananassa HOM05D006797 ORTHO05D007696 6.0e-13 77.8 117 43.6
FAN16G2513 Fragaria x ananassa HOM05D006797 ORTHO05D007696 7.9e-13 77.4 117 43.6
FAN25G1182 Fragaria x ananassa HOM05D006797 ORTHO05D007696 7.9e-13 77.4 117 43.6
FvH4_3g13200 Fragaria vesca HOM05D006797 ORTHO05D007696 1.3e-12 76.6 117 43.6
FAN11G3985 Fragaria x ananassa HOM05D006797 ORTHO05D007696 1.3e-12 76.6 117 43.6
AL1G45170 Arabidopsis lyrata HOM05D006797 ORTHO05D007696 1.8e-12 76.3 120 47.5
BcaB07g32754 Brassica carinata HOM05D006797 ORTHO05D007696 3.0e-12 75.5 119 50.4
AT1G30880 Arabidopsis thaliana HOM05D006797 ORTHO05D007696 5.1e-12 74.7 121 50.4
Zm00001eb430680 Zea mays HOM05D006797 ORTHO05D007696 5.1e-12 74.7 115 47.8
BolC7t41975H Brassica oleracea HOM05D006797 ORTHO05D007696 6.7e-12 74.3 119 51.3
Dinv02379 Davidia involucrata HOM05D006797 ORTHO05D007696 6.7e-12 74.3 106 49.1
BraA08t33088Z Brassica rapa HOM05D006797 ORTHO05D007696 8.7e-12 73.9 118 48.3
Carub.0001s2922 Capsella rubella HOM05D006797 ORTHO05D007696 8.7e-12 73.9 120 49.2
CARHR030370 Cardamine hirsuta HOM05D006797 ORTHO05D007696 8.7e-12 73.9 121 46.3
BcaC07g37796 Brassica carinata HOM05D006797 ORTHO05D007696 1.1e-11 73.6 117 49.6
A08p10910 Brassica napus HOM05D006797 ORTHO05D007696 1.1e-11 73.6 117 49.6
A09p35270 Brassica napus HOM05D006797 ORTHO05D007696 1.1e-11 73.6 116 50.9
Thhalv10009126m.g Eutrema salsugineum HOM05D006797 ORTHO05D007696 1.1e-11 73.6 118 47.5
Os04g0611300 Oryza sativa ssp. japonica HOM05D006797 ORTHO05D007696 1.1e-11 73.6 114 47.4
Sp1g26780 Schrenkiella parvula HOM05D006797 ORTHO05D007696 1.1e-11 73.6 118 48.3
C07p14730 Brassica napus HOM05D006797 ORTHO05D007696 1.5e-11 73.2 119 50.4
BcaC05g27127 Brassica carinata HOM05D006797 ORTHO05D007696 1.9e-11 72.8 119 48.7
C05p30120 Brassica napus HOM05D006797 ORTHO05D007696 1.9e-11 72.8 119 48.7
COL.COLO4_25039 Corchorus olitorius HOM05D006797 ORTHO05D007696 2.5e-11 72.4 99 52.5
BcaB04g18200 Brassica carinata HOM05D006797 ORTHO05D007696 3.3e-11 72.0 122 48.4
Zm00001eb442340 Zea mays HOM05D006797 ORTHO05D007696 4.3e-11 71.6 98 51.0
Zm00001eb071100 Zea mays HOM05D006797 ORTHO05D007696 1.6e-10 69.7 115 47.0
MBI18_g20922_MAGBIO Magnolia biondii HOM05D006797 ORTHO05D007696 2.1e-10 69.3 119 42.9
HPP92_013198 Vanilla planifolia HOM05D006797 ORTHO05D007696 2.1e-10 69.3 126 42.9
BolC8t48187H Brassica oleracea HOM05D006797 ORTHO05D007696 2.8e-10 68.9 119 47.9
Haze_24216 Corylus avellana HOM05D006797 ORTHO05D007696 3.6e-10 68.6 133 39.8
unitig_37.g11921 Utricularia gibba HOM05D006797 ORTHO05D007696 6.2e-10 67.8 48 72.9
vmacro03563 Vaccinium macrocarpon HOM05D006797 ORTHO05D007696 8.1e-10 67.4 76 55.3
BraA09t39054Z Brassica rapa HOM05D006797 ORTHO05D007696 1.1e-09 67.0 122 46.7
DCAR_001265 Daucus carota HOM05D006797 ORTHO05D007696 1.8e-09 66.2 97 48.5
Thecc.02G002300 Theobroma cacao HOM05D006797 ORTHO05D007696 3.1e-09 65.5 46 73.9
BolC5t31749H Brassica oleracea HOM05D006797 ORTHO05D007696 4.0e-09 65.1 125 44.0
Haze_05201 Corylus avellana HOM05D000001 ORTHO05D010268 4.0e-09 65.1 49 67.3
Haze_15747 Corylus avellana HOM05D006797 ORTHO05D007696 4.0e-09 65.1 49 67.3
Sabra03G0112800 Salix brachista HOM05D006797 ORTHO05D007696 6.9e-09 64.3 49 65.3
ATR0763G022 Amborella trichopoda HOM05D006797 ORTHO05D007696 3.4e-08 62.0 114 41.2
SMO167G0044 Selaginella moellendorffii HOM05D006797 ORTHO05D007696 6.4e-07 57.8 48 66.7
Hma1.2p1_0747F.1_g212490 Hydrangea macrophylla HOM05D006797 ORTHO05D007696 1.1e-06 57.0 77 49.4


User provided reference genes

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