Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 8.5e-105 383.6 188 100.0
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 1.1e-101 373.2 189 97.4
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.8e-68 262.3 192 65.6
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 1.8e-67 259.6 182 63.7
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 7.0e-67 257.7 190 63.7
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.2e-66 256.9 188 64.4
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 2.0e-66 256.1 182 64.3
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 1.7e-65 253.1 184 62.5
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 3.8e-65 251.9 188 63.3
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 5.0e-65 251.5 194 62.9
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 5.0e-65 251.5 176 65.3
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 1.5e-64 250.0 182 62.6
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 1.2e-63 246.9 188 58.5
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 1.2e-63 246.9 189 59.8
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 2.1e-63 246.1 198 59.1
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 2.8e-63 245.7 193 62.7
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 3.6e-63 245.4 184 62.5
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 4.7e-63 245.0 171 67.8
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 6.1e-63 244.6 193 62.2
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 6.1e-63 244.6 185 61.1
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 6.1e-63 244.6 188 61.7
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 8.0e-63 244.2 177 63.8
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 8.0e-63 244.2 189 59.8
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 8.0e-63 244.2 184 62.0
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.8e-62 243.0 164 65.9
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 1.8e-62 243.0 188 63.3
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 5.2e-62 241.5 185 60.0
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 5.2e-62 241.5 181 61.3
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 5.2e-62 241.5 180 63.3
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 8.8e-62 240.7 175 64.6
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 3.4e-61 238.8 186 59.7
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 5.7e-61 238.0 181 60.8
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 5.7e-61 238.0 186 60.2
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 5.7e-61 238.0 194 58.8
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 9.8e-61 237.3 181 61.3
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 9.8e-61 237.3 191 60.2
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.3e-60 236.9 160 67.5
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 3.7e-60 235.3 181 61.9
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 3.7e-60 235.3 181 61.9
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 6.3e-60 234.6 184 59.2
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 1.1e-59 233.8 181 60.2
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 1.1e-59 233.8 181 62.4
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.1e-59 233.8 181 60.8
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 1.8e-59 233.0 188 61.2
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.4e-59 232.6 186 59.7
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 3.1e-59 232.3 157 65.6
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 7.0e-59 231.1 186 60.2
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 7.0e-59 231.1 187 59.9
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 7.0e-59 231.1 182 57.7
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.2e-58 230.3 187 61.0
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.6e-58 229.9 183 61.2
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 4.5e-58 228.4 199 57.8
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 5.9e-58 228.0 177 57.6
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 7.8e-58 227.6 182 59.9
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 1.0e-57 227.3 199 57.8
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.0e-57 227.3 177 57.1
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 1.3e-57 226.9 187 58.8
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 2.3e-57 226.1 184 57.1
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 2.9e-57 225.7 184 59.2
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 5.0e-57 224.9 181 60.2
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 5.0e-57 224.9 186 56.5
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 6.6e-57 224.6 173 57.8
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 8.6e-57 224.2 182 58.2
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 8.6e-57 224.2 182 58.2
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 1.5e-56 223.4 149 67.1
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 1.5e-56 223.4 181 59.7
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 1.5e-56 223.4 172 62.2
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 1.9e-56 223.0 183 59.0
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 1.9e-56 223.0 191 56.5
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 3.3e-56 222.2 183 58.5
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 3.3e-56 222.2 189 57.1
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 3.3e-56 222.2 191 55.5
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 3.3e-56 222.2 191 55.5
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 4.3e-56 221.9 183 58.5
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 4.3e-56 221.9 185 56.8
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 4.3e-56 221.9 181 58.0
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 5.6e-56 221.5 181 58.0
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 5.6e-56 221.5 189 59.8
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 5.6e-56 221.5 188 54.8
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 9.5e-56 220.7 186 57.0
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 1.2e-55 220.3 194 57.2
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 2.1e-55 219.5 149 61.7
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 2.8e-55 219.2 208 51.9
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 4.7e-55 218.4 190 55.3
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 8.0e-55 217.6 149 61.1
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 8.0e-55 217.6 156 62.2
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 1.0e-54 217.2 183 57.4
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 1.0e-54 217.2 200 52.5
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.4e-54 216.9 189 53.4
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 1.4e-54 216.9 181 55.8
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 2.3e-54 216.1 187 55.1
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 2.3e-54 216.1 207 52.2
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 3.0e-54 215.7 179 57.0
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 4.0e-54 215.3 149 61.1
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 6.8e-54 214.5 191 52.9
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 8.9e-54 214.2 194 52.6
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 1.2e-53 213.8 168 58.9
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.5e-53 213.4 186 53.8
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 2.6e-53 212.6 191 52.9
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 3.4e-53 212.2 173 56.6
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 7.5e-53 211.1 185 51.9
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 1.1e-51 207.2 218 50.9
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 3.2e-51 205.7 190 53.2
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 7.0e-51 204.5 187 54.0
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 2.3e-46 189.5 173 53.2
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 1.5e-45 186.8 154 62.3
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 3.7e-44 182.2 160 52.5
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 1.6e-42 176.8 191 49.7
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 1.0e-41 174.1 180 46.1
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 1.5e-40 170.2 157 49.7
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 4.3e-40 168.7 157 49.7
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.1e-38 162.5 188 42.6
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.1e-38 162.5 188 42.6
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 8.9e-38 161.0 193 44.0
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 2.6e-37 159.5 115 67.0
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 3.4e-37 159.1 122 63.9
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.2e-35 152.5 190 40.5
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.1e-34 149.8 103 67.0
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 6.0e-34 148.3 117 59.0
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.1e-32 144.1 119 59.7
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 7.3e-32 141.4 119 57.1
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 4.1e-27 125.6 113 54.9
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 5.1e-25 118.6 154 37.7
QL02p036792 Quercus lobata HOM05D005543 ORTHO05D006584 7.6e-21 104.8 70 62.9
Oeu022061.1 Olea europaea HOM05D005543 ORTHO05D006584 1.4e-19 100.5 73 60.3
CSS0016395 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 3.2e-19 99.4 74 60.8
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 7.1e-19 98.2 80 55.0
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 4.6e-18 95.5 145 33.1
Sopen04g028180 Solanum pennellii HOM05D000002 ORTHO05D000047 1.9e-16 90.1 67 58.2
TPR.G22092 Trifolium pratense HOM05D005543 ORTHO05D006584 1.9e-16 90.1 71 56.3
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 3.3e-16 89.4 87 48.3
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 1.4e-14 84.0 144 28.5
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 6.4e-12 75.1 151 28.5
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 1.4e-11 73.9 45 66.7
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 7.9e-10 68.2 73 49.3
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 2.8e-07 59.7 72 45.8


User provided reference genes

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