Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1792 Papaver somniferum HOM05D006116 ORTHO05D007795 2.1e-228 795.4 422 100.0
PSO732G0356 Papaver somniferum HOM05D006116 ORTHO05D007795 2.5e-213 745.3 446 86.3
vmacro00376 Vaccinium macrocarpon HOM05D006116 ORTHO05D007795 2.0e-154 549.7 446 62.6
CSS0043999 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 4.5e-154 548.5 445 62.0
Ciclev10020221m.g Citrus clementina HOM05D006116 ORTHO05D007795 2.4e-152 542.7 437 62.7
Nitab4.5_0001255g0040 Nicotiana tabacum HOM05D006116 ORTHO05D007795 7.1e-152 541.2 451 60.8
COL.COLO4_06703 Corchorus olitorius HOM05D006116 ORTHO05D007795 1.6e-151 540.0 448 60.9
Nitab4.5_0006135g0020 Nicotiana tabacum HOM05D006116 ORTHO05D007795 1.6e-151 540.0 440 62.3
Actinidia03408 Actinidia chinensis HOM05D006116 ORTHO05D007795 2.7e-151 539.3 440 63.0
Aqoxy7G00869 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 6.0e-151 538.1 430 66.5
MD04G1057000 Malus domestica HOM05D006116 ORTHO05D007795 6.0e-151 538.1 441 61.5
Prupe.5G050800 Prunus persica HOM05D006116 ORTHO05D007795 7.9e-151 537.7 440 61.8
Rhsim11G0056500 Rhododendron simsii HOM05D006116 ORTHO05D007795 6.7e-150 534.6 445 60.4
CSS0034154 Camellia sinensis var. sinensis HOM05D006116 ORTHO05D007795 1.9e-149 533.1 423 63.1
Sopen08g026090 Solanum pennellii HOM05D006116 ORTHO05D007795 2.5e-149 532.7 433 61.9
FAN18G3779 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.3e-149 532.3 442 61.8
PGR042G3339 Punica granatum HOM05D006116 ORTHO05D007795 9.6e-149 530.8 457 60.2
CAN.G1445.8 Capsicum annuum HOM05D006116 ORTHO05D007795 4.8e-148 528.5 437 61.6
Solyc08g077510.4 Solanum lycopersicum HOM05D006116 ORTHO05D007795 8.1e-148 527.7 429 61.8
FvH4_5g20810 Fragaria vesca HOM05D006116 ORTHO05D007795 1.1e-147 527.3 442 61.3
Nn1g00701 Nelumbo nucifera HOM05D006116 ORTHO05D007795 2.4e-147 526.2 472 57.4
PGSC0003DMG400001856 Solanum tuberosum HOM05D006116 ORTHO05D007795 2.4e-147 526.2 437 60.6
ClCG10G002040 Citrullus lanatus HOM05D006116 ORTHO05D007795 3.1e-147 525.8 438 63.9
FAN08G3374 Fragaria x ananassa HOM05D006116 ORTHO05D007795 3.1e-147 525.8 443 61.9
HanXRQChr03g0087311 Helianthus annuus HOM05D006116 ORTHO05D007795 3.4e-146 522.3 435 63.9
THA.LOC104813328 Tarenaya hassleriana HOM05D006116 ORTHO05D007795 5.8e-146 521.5 425 61.6
CiPaw.11G085600 Carya illinoinensis HOM05D006116 ORTHO05D007795 7.6e-146 521.2 454 60.4
FAN04G0705 Fragaria x ananassa HOM05D006116 ORTHO05D007795 2.9e-145 519.2 437 60.9
CsaV3_3G002130 Cucumis sativus L. HOM05D006116 ORTHO05D007795 1.1e-144 517.3 440 60.7
Duzib205G0680 Durio zibethinus HOM05D006116 ORTHO05D007795 1.9e-144 516.5 448 60.0
CANSAT21G1244 Cannabis sativa HOM05D006116 ORTHO05D007795 2.4e-144 516.2 468 59.0
ECA240G2524 Erigeron canadensis HOM05D006116 ORTHO05D007795 9.3e-144 514.2 432 61.3
MELO3C013885.2 Cucumis melo HOM05D006116 ORTHO05D007795 1.2e-143 513.8 438 61.0
GSVIVG01013271001 Vitis vinifera HOM05D006116 ORTHO05D007795 1.2e-143 513.8 449 59.5
Hma1.2p1_0414F.1_g147510 Hydrangea macrophylla HOM05D006116 ORTHO05D007795 2.1e-143 513.1 443 59.4
Thecc.03G237000 Theobroma cacao HOM05D006116 ORTHO05D007795 1.3e-142 510.4 447 58.8
Gorai.008G230000 Gossypium raimondii HOM05D006116 ORTHO05D007795 3.9e-142 508.8 447 61.1
QL12p007972 Quercus lobata HOM05D006116 ORTHO05D007795 1.1e-141 507.3 460 59.8
BolC7t45369H Brassica oleracea HOM05D006116 ORTHO05D007795 5.6e-141 505.0 432 60.9
Gohir.A12G211900 Gossypium hirsutum HOM05D006116 ORTHO05D007795 1.6e-140 503.4 445 60.7
Medtr4g099100 Medicago truncatula HOM05D006116 ORTHO05D007795 2.1e-140 503.1 448 59.4
C07p48610 Brassica napus HOM05D006116 ORTHO05D007795 2.8e-140 502.7 432 60.6
Lj4g0012718 Lotus japonicus HOM05D006116 ORTHO05D007795 4.8e-140 501.9 435 58.2
arahy.Tifrunner.gnm1.ann1.L13TYF Arachis hypogaea HOM05D006116 ORTHO05D007795 8.2e-140 501.1 456 58.1
arahy.Tifrunner.gnm1.ann1.F87Z6X Arachis hypogaea HOM05D006116 ORTHO05D007795 1.4e-139 500.4 460 57.8
Glyma.17G150200 Glycine max HOM05D006116 ORTHO05D007795 3.1e-139 499.2 421 61.5
Oeu020145.1 Olea europaea HOM05D006116 ORTHO05D007795 3.1e-139 499.2 445 56.9
Cc08_g01540 Coffea canephora HOM05D006116 ORTHO05D007795 4.0e-139 498.8 450 58.2
RcHm_v2.0_Chr7g0207741 Rosa chinensis HOM05D006116 ORTHO05D007795 5.3e-139 498.4 448 57.1
Aa31LG2G13210 Aethionema arabicum HOM05D006116 ORTHO05D007795 6.9e-139 498.0 401 61.3
Ca_22031_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 6.9e-139 498.0 435 60.5
Lalb_Chr05g0220761 Lupinus albus HOM05D006116 ORTHO05D007795 9.0e-139 497.7 429 59.0
Eucgr.E00329 Eucalyptus grandis HOM05D006116 ORTHO05D007795 2.0e-138 496.5 460 57.4
Lj8A287G22 Lonicera japonica HOM05D006116 ORTHO05D007795 4.5e-138 495.4 324 73.1
Lsat_1_v5_gn_6_88480 Lactuca sativa HOM05D006116 ORTHO05D007795 1.0e-137 494.2 442 61.1
Peaxi162Scf00084g00117 Petunia axillaris HOM05D006116 ORTHO05D007795 1.7e-137 493.4 436 58.3
DCAR_008310 Daucus carota HOM05D006116 ORTHO05D007795 3.8e-137 492.3 452 58.8
TPR.G11192 Trifolium pratense HOM05D006116 ORTHO05D007795 8.4e-137 491.1 461 58.1
Potri.003G085600 Populus trichocarpa HOM05D006116 ORTHO05D007795 2.5e-136 489.6 444 56.8
Ah.12g053810 Amaranthus hybridus HOM05D006116 ORTHO05D007795 1.0e-134 484.2 428 57.5
A03p50320 Brassica napus HOM05D006116 ORTHO05D007795 5.1e-134 481.9 430 59.5
BraA03t14121Z Brassica rapa HOM05D006116 ORTHO05D007795 3.3e-133 479.2 430 58.4
VMungo0251G0386 Vigna mungo HOM05D006116 ORTHO05D007795 3.3e-133 479.2 455 57.6
Os04g0542900 Oryza sativa ssp. japonica HOM05D006116 ORTHO05D007795 4.3e-133 478.8 468 56.2
TWI60G0034 Tripterygium wilfordii HOM05D006116 ORTHO05D007795 4.3e-133 478.8 449 57.9
Sp7g17070 Schrenkiella parvula HOM05D006116 ORTHO05D007795 5.7e-133 478.4 426 61.5
CARHR223700 Cardamine hirsuta HOM05D006116 ORTHO05D007795 9.7e-133 477.6 445 56.2
Sc07g0009020 Simmondsia chinensis HOM05D006116 ORTHO05D007795 1.3e-132 477.2 446 58.1
Hund14464 Selenicereus undatus HOM05D006116 ORTHO05D007795 1.4e-131 473.8 447 56.6
Sed0023369 Sechium edule HOM05D006116 ORTHO05D007795 1.8e-131 473.4 431 60.8
Zm00001eb075030 Zea mays HOM05D006116 ORTHO05D007795 5.3e-131 471.9 482 53.3
AL7G37600 Arabidopsis lyrata HOM05D006116 ORTHO05D007795 1.2e-130 470.7 429 56.4
Thhalv10025290m.g Eutrema salsugineum HOM05D006116 ORTHO05D007795 2.6e-130 469.5 432 59.5
Gohir.D12G214400 Gossypium hirsutum HOM05D006116 ORTHO05D007795 4.5e-130 468.8 304 73.0
Phvul.003G227000 Phaseolus vulgaris HOM05D006116 ORTHO05D007795 5.9e-130 468.4 444 54.5
ClCG00G004790 Citrullus lanatus HOM05D006116 ORTHO05D007795 1.7e-129 466.8 438 59.4
Carub.0007s2428 Capsella rubella HOM05D006116 ORTHO05D007795 2.9e-129 466.1 298 72.5
MSTRG.1960 Avicennia marina HOM05D006116 ORTHO05D007795 7.2e-128 461.5 422 55.9
Migut.E00901 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.8e-126 456.8 305 70.5
Manes.17G019700 Manihot esculenta HOM05D006116 ORTHO05D007795 1.5e-125 453.8 452 52.4
AUR62018802 Chenopodium quinoa HOM05D006116 ORTHO05D007795 1.3e-124 450.7 404 57.9
SGA_v2.0_scaffold20G09247 Striga asiatica HOM05D006116 ORTHO05D007795 2.8e-124 449.5 486 52.5
unitig_21.g20374 Utricularia gibba HOM05D006116 ORTHO05D007795 1.4e-123 447.2 424 55.0
ATR0829G115 Amborella trichopoda HOM05D006116 ORTHO05D007795 2.0e-122 443.4 456 52.0
EL10Ac5g12218 Beta vulgaris HOM05D006116 ORTHO05D007795 2.0e-122 443.4 507 48.5
Lalb_Chr09g0329681 Lupinus albus HOM05D006116 ORTHO05D007795 3.4e-122 442.6 322 66.5
AUR62007200 Chenopodium quinoa HOM05D006116 ORTHO05D007795 2.9e-121 439.5 303 66.7
HPP92_020688 Vanilla planifolia HOM05D006116 ORTHO05D007795 3.7e-116 422.5 439 51.9
SEGI_40490 Sequoiadendron giganteum HOM05D006116 ORTHO05D007795 5.0e-113 412.1 293 66.2
TAR375G0725 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.1e-109 401.0 396 55.8
Mapoly0141s0023 Marchantia polymorpha HOM05D006116 ORTHO05D007795 7.0e-107 391.7 376 52.1
AagrBONN_evm.TU.Sc2ySwM_368.518 Anthoceros agrestis HOM05D006116 ORTHO05D007795 8.5e-105 384.8 425 48.0
Pp3c14_16100 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.5e-104 384.0 325 56.6
Pp3c14_16101 Physcomitrium patens HOM05D006116 ORTHO05D007795 1.5e-104 384.0 325 56.6
CiPaw.12G058000 Carya illinoinensis HOM05D006116 ORTHO05D007795 1.6e-103 380.6 233 75.5
TAR375G0708 Trochodendron aralioides HOM05D006116 ORTHO05D007795 4.8e-100 369.0 378 54.5
Pp3c2_10960 Physcomitrium patens HOM05D006116 ORTHO05D007795 5.3e-99 365.5 320 55.9
Zm00001eb313880 Zea mays HOM05D006116 ORTHO05D007795 2.7e-98 363.2 265 64.9
PSO732G0385 Papaver somniferum HOM05D006116 ORTHO05D007795 5.9e-98 362.1 251 82.1
SMO356G0030 Selaginella moellendorffii HOM05D006116 ORTHO05D007795 1.3e-97 360.9 306 55.2
Migut.E00812 Erythranthe guttata HOM05D006116 ORTHO05D007795 1.5e-96 357.5 219 75.8
Psat4g077320 Pisum sativum HOM05D006116 ORTHO05D007795 9.4e-96 354.8 347 55.9
Zm00001eb091650 Zea mays HOM05D006116 ORTHO05D007795 3.4e-93 346.3 301 56.1
BcaC06g33529 Brassica carinata HOM05D006116 ORTHO05D007795 3.8e-89 332.8 346 54.0
FAN13G0371 Fragaria x ananassa HOM05D006116 ORTHO05D007795 4.2e-88 329.3 335 51.9
Haze_08334 Corylus avellana HOM05D006116 ORTHO05D007795 3.0e-86 323.2 352 50.9
Zm00001eb319310 Zea mays HOM05D006116 ORTHO05D007795 2.2e-84 317.0 201 73.1
CBR_g27781 Chara braunii HOM05D006116 ORTHO05D007795 4.0e-70 269.6 265 48.3
Cre14.g631900 Chlamydomonas reinhardtii HOM05D006116 ORTHO05D007795 4.1e-67 259.6 269 46.1
Zm00001eb129530 Zea mays HOM05D006116 ORTHO05D007795 1.7e-65 254.2 202 60.4
Zm00001eb391960 Zea mays HOM05D006116 ORTHO05D007795 1.7e-65 254.2 202 60.4
Dinv28896 Davidia involucrata HOM05D006116 ORTHO05D007795 4.0e-62 243.0 208 58.7
Atru.chr9.1147 Acer truncatum HOM05D006116 ORTHO05D007795 4.0e-54 216.5 119 81.5
Zm00001eb268110 Zea mays HOM05D006116 ORTHO05D007795 3.5e-42 176.8 191 48.2
Zm00001eb276710 Zea mays HOM05D006116 ORTHO05D007795 7.9e-34 149.1 128 57.0
EL10Ac5g12217 Beta vulgaris HOM05D006116 ORTHO05D007795 4.0e-30 136.7 81 76.5
Ca_20974_v3 Cicer arietinum L. HOM05D006116 ORTHO05D007795 1.9e-27 127.9 137 50.4
TAR375G0859 Trochodendron aralioides HOM05D006116 ORTHO05D007795 1.6e-26 124.8 69 79.7
Lsat_1_v5_gn_7_9401 Lactuca sativa HOM05D006116 ORTHO05D000290 2.1e-26 124.4 121 50.4
CAN.G507.3 Capsicum annuum HOM05D006116 ORTHO05D007795 9.0e-22 109.0 77 64.9
DCAR_005654 Daucus carota HOM05D006116 ORTHO05D007795 2.2e-20 104.4 65 70.8
CDE11G0087 Ceratophyllum demersum HOM05D006116 ORTHO05D007795 1.4e-14 85.1 53 69.8
TAR375G0706 Trochodendron aralioides HOM05D006116 ORTHO05D009946 5.5e-11 73.2 62 53.2
Aqoxy6G01690 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 2.3e-09 67.8 120 29.2
BolC8t48435H Brassica oleracea HOM05D006116 ORTHO05D007795 5.1e-09 66.6 39 66.7
Aqoxy7G03532 Aquilegia oxysepala HOM05D006116 ORTHO05D007795 1.1e-06 58.9 57 52.6


User provided reference genes

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