Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1684 Papaver somniferum HOM05D005813 ORTHO05D007310 7.3e-144 513.8 255 100.0
PSO782G5041 Papaver somniferum HOM05D005813 ORTHO05D007310 1.4e-113 413.3 245 80.8
PSO478G4467 Papaver somniferum HOM05D005813 ORTHO05D007310 2.6e-93 345.9 241 68.5
PSO782G1692 Papaver somniferum HOM05D005813 ORTHO05D007310 7.7e-93 344.4 241 68.5
PGR031G3848 Punica granatum HOM05D005813 ORTHO05D007310 1.3e-87 327.0 241 64.7
MBI04_g35272_MAGBIO Magnolia biondii HOM05D005813 ORTHO05D007310 6.3e-87 324.7 241 65.1
Aqoxy7G00631 Aquilegia oxysepala HOM05D005813 ORTHO05D007310 7.0e-86 321.2 241 63.1
Nn1g01240 Nelumbo nucifera HOM05D005813 ORTHO05D007310 7.0e-86 321.2 241 64.7
Duzib133G0639 Durio zibethinus HOM05D005813 ORTHO05D007310 1.2e-85 320.5 241 63.1
CiPaw.02G167800 Carya illinoinensis HOM05D005813 ORTHO05D007310 1.6e-85 320.1 241 63.9
CiPaw.01G262200 Carya illinoinensis HOM05D005813 ORTHO05D007310 3.5e-85 318.9 241 63.5
Nn4g26391 Nelumbo nucifera HOM05D005813 ORTHO05D007310 3.5e-85 318.9 245 63.3
Gohir.A08G031100 Gossypium hirsutum HOM05D005813 ORTHO05D007310 4.5e-85 318.5 241 61.8
arahy.Tifrunner.gnm1.ann1.4B5N4V Arachis hypogaea HOM05D005813 ORTHO05D007310 5.9e-85 318.2 241 63.1
Duzib138G0196 Durio zibethinus HOM05D005813 ORTHO05D007310 7.7e-85 317.8 241 61.8
CSS0030666 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 2.2e-84 316.2 241 63.5
CSS0042195 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 2.2e-84 316.2 241 63.5
Gohir.D08G155500 Gossypium hirsutum HOM05D005813 ORTHO05D007310 3.8e-84 315.5 241 61.8
Gorai.004G161700 Gossypium raimondii HOM05D005813 ORTHO05D007310 3.8e-84 315.5 241 61.8
Lj1g0017617 Lotus japonicus HOM05D005813 ORTHO05D007310 3.8e-84 315.5 241 62.2
CANSAT56G4177 Cannabis sativa HOM05D005813 ORTHO05D007310 5.0e-84 315.1 241 62.7
Glyma.09G269300 Glycine max HOM05D005813 ORTHO05D007310 6.5e-84 314.7 244 61.1
CsaV3_3G009700 Cucumis sativus L. HOM05D005813 ORTHO05D007310 8.5e-84 314.3 241 61.4
SalBow5G4545 Salvia bowleyana HOM05D005813 ORTHO05D007310 8.5e-84 314.3 241 63.9
Migut.B01633 Erythranthe guttata HOM05D005813 ORTHO05D007310 1.1e-83 313.9 241 62.7
Cfa001724 Carpinus fangiana HOM05D005813 ORTHO05D007310 1.5e-83 313.5 241 63.1
Glyma.18G220700 Glycine max HOM05D005813 ORTHO05D007310 2.5e-83 312.8 244 60.7
Gohir.A08G134600 Gossypium hirsutum HOM05D005813 ORTHO05D007310 2.5e-83 312.8 241 61.0
Cpa.g.sc18.111 Carica papaya HOM05D005813 ORTHO05D007310 3.2e-83 312.4 241 61.8
Potri.002G148100 Populus trichocarpa HOM05D005813 ORTHO05D007310 3.2e-83 312.4 241 61.4
Ca_11657_v3 Cicer arietinum L. HOM05D005813 ORTHO05D007310 4.2e-83 312.0 241 61.8
PGSC0003DMG400012776 Solanum tuberosum HOM05D005813 ORTHO05D007310 4.2e-83 312.0 241 62.7
Lj7A528T62 Lonicera japonica HOM05D005813 ORTHO05D007310 5.5e-83 311.6 259 59.5
Medtr7g074890 Medicago truncatula HOM05D005813 ORTHO05D007310 5.5e-83 311.6 241 61.8
Solyc01g091310.3 Solanum lycopersicum HOM05D005813 ORTHO05D007310 5.5e-83 311.6 241 62.2
Sopen01g037050 Solanum pennellii HOM05D005813 ORTHO05D007310 7.2e-83 311.2 241 62.2
TPR.G29407 Trifolium pratense HOM05D005813 ORTHO05D007310 7.2e-83 311.2 241 63.1
TAR374G0529 Trochodendron aralioides HOM05D005813 ORTHO05D007310 1.2e-82 310.5 241 62.2
MELO3C006191.2 Cucumis melo HOM05D005813 ORTHO05D007310 1.6e-82 310.1 241 60.6
Prupe.2G145000 Prunus persica HOM05D005813 ORTHO05D007310 2.1e-82 309.7 244 61.1
Eucgr.D02453 Eucalyptus grandis HOM05D005813 ORTHO05D007310 2.7e-82 309.3 244 60.7
Gohir.D08G042200 Gossypium hirsutum HOM05D005813 ORTHO05D007310 2.7e-82 309.3 241 60.6
Lalb_Chr03g0039571 Lupinus albus HOM05D005813 ORTHO05D007310 2.7e-82 309.3 244 60.2
Phvul.008G076400 Phaseolus vulgaris HOM05D005813 ORTHO05D007310 3.6e-82 308.9 244 60.2
arahy.Tifrunner.gnm1.ann1.DKE7V3 Arachis hypogaea HOM05D005813 ORTHO05D007310 4.7e-82 308.5 237 62.4
QL08p052527 Quercus lobata HOM05D005813 ORTHO05D007310 4.7e-82 308.5 241 61.4
AL6G53420 Arabidopsis lyrata HOM05D005813 ORTHO05D007310 6.1e-82 308.1 240 60.4
Thecc.01G376600 Theobroma cacao HOM05D005813 ORTHO05D007310 8.0e-82 307.8 241 61.0
Cc02_g23900 Coffea canephora HOM05D005813 ORTHO05D007310 1.0e-81 307.4 241 61.8
MD02G1204700 Malus domestica HOM05D005813 ORTHO05D007310 1.4e-81 307.0 244 61.1
CDE11G1084 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 1.8e-81 306.6 241 59.3
MSTRG.17192 Avicennia marina HOM05D005813 ORTHO05D007310 2.3e-81 306.2 241 61.4
Manes.05G045300 Manihot esculenta HOM05D005813 ORTHO05D007310 2.3e-81 306.2 241 60.6
SGA_v2.0_scaffold153G37009 Striga asiatica HOM05D005813 ORTHO05D007310 2.3e-81 306.2 241 61.8
TWI59G1428 Tripterygium wilfordii HOM05D005813 ORTHO05D007310 2.3e-81 306.2 241 60.6
VMungo1383G1345 Vigna mungo HOM05D005813 ORTHO05D007310 2.3e-81 306.2 244 59.8
ClCG05G002290 Citrullus lanatus HOM05D005813 ORTHO05D007310 4.0e-81 305.4 241 59.8
Atru.chr5.306 Acer truncatum HOM05D005813 ORTHO05D007310 5.2e-81 305.1 243 62.6
Carub.0006s3714 Capsella rubella HOM05D005813 ORTHO05D007310 6.8e-81 304.7 240 59.6
CDE09G1050 Ceratophyllum demersum HOM05D005813 ORTHO05D007310 6.8e-81 304.7 241 59.3
Hund27345 Selenicereus undatus HOM05D005813 ORTHO05D007310 6.8e-81 304.7 245 58.8
Thhalv10028676m.g Eutrema salsugineum HOM05D005813 ORTHO05D007310 8.8e-81 304.3 240 60.8
Aa31LG5G9310 Aethionema arabicum HOM05D005813 ORTHO05D007310 1.2e-80 303.9 240 59.6
AT4G00090 Arabidopsis thaliana HOM05D005813 ORTHO05D007310 1.5e-80 303.5 240 59.2
MD07G1121300 Malus domestica HOM05D005813 ORTHO05D007310 2.0e-80 303.1 245 61.2
Potri.014G069400 Populus trichocarpa HOM05D005813 ORTHO05D007310 2.6e-80 302.8 241 58.9
Sed0028100 Sechium edule HOM05D005813 ORTHO05D007310 2.6e-80 302.8 241 59.8
FAN10G1195 Fragaria x ananassa HOM05D005813 ORTHO05D007310 3.4e-80 302.4 241 61.4
FvH4_7g11840 Fragaria vesca HOM05D005813 ORTHO05D007310 4.4e-80 302.0 241 61.4
FAN01G0479 Fragaria x ananassa HOM05D005813 ORTHO05D007310 4.4e-80 302.0 241 61.4
FAN06G0614 Fragaria x ananassa HOM05D005813 ORTHO05D007310 4.4e-80 302.0 241 61.4
FAN06G1564 Fragaria x ananassa HOM05D005813 ORTHO05D007310 4.4e-80 302.0 241 61.4
Sp6g00150 Schrenkiella parvula HOM05D005813 ORTHO05D007310 5.7e-80 301.6 240 59.6
FAN10G2798 Fragaria x ananassa HOM05D005813 ORTHO05D007310 7.5e-80 301.2 241 61.4
THA.LOC104817009 Tarenaya hassleriana HOM05D005813 ORTHO05D007310 9.8e-80 300.8 245 59.6
CARHR248130 Cardamine hirsuta HOM05D005813 ORTHO05D007310 1.3e-79 300.4 240 59.6
Sc02g0002610 Simmondsia chinensis HOM05D005813 ORTHO05D007310 1.3e-79 300.4 241 58.9
Nitab4.5_0004917g0040 Nicotiana tabacum HOM05D005813 ORTHO05D007310 1.7e-79 300.1 241 59.8
Sabra02G0117100 Salix brachista HOM05D005813 ORTHO05D007310 1.7e-79 300.1 254 57.9
A09p00750 Brassica napus HOM05D005813 ORTHO05D007310 2.2e-79 299.7 240 59.2
C09p00110 Brassica napus HOM05D005813 ORTHO05D007310 2.2e-79 299.7 240 59.2
BraA09t35685Z Brassica rapa HOM05D005813 ORTHO05D007310 2.2e-79 299.7 240 59.2
RcHm_v2.0_Chr1g0350521 Rosa chinensis HOM05D005813 ORTHO05D007310 2.2e-79 299.7 241 60.2
BcaC04g24202 Brassica carinata HOM05D005813 ORTHO05D007310 4.8e-79 298.5 240 59.2
BolC9t52946H Brassica oleracea HOM05D005813 ORTHO05D007310 4.8e-79 298.5 240 59.2
Sabra02G0115400 Salix brachista HOM05D005813 ORTHO05D007310 8.3e-79 297.7 260 56.5
BcaB01g02210 Brassica carinata HOM05D005813 ORTHO05D007310 1.1e-78 297.4 240 58.3
ATR0810G089 Amborella trichopoda HOM05D005813 ORTHO05D007310 1.8e-78 296.6 241 58.5
Ah.05g174210 Amaranthus hybridus HOM05D005813 ORTHO05D007310 2.4e-78 296.2 241 58.9
Lsat_1_v5_gn_7_7160 Lactuca sativa HOM05D005813 ORTHO05D007310 3.1e-78 295.8 240 60.4
PSO170G3521 Papaver somniferum HOM05D005813 ORTHO05D007310 4.1e-78 295.4 197 72.1
Ciclev10020183m.g Citrus clementina HOM05D005813 ORTHO05D007310 5.4e-78 295.0 241 58.9
unitig_749.g14372 Utricularia gibba HOM05D005813 ORTHO05D007310 9.1e-78 294.3 241 59.3
vmacro21010 Vaccinium macrocarpon HOM05D005813 ORTHO05D007310 1.2e-77 293.9 241 59.8
AUR62004213 Chenopodium quinoa HOM05D005813 ORTHO05D007310 1.6e-77 293.5 244 57.8
Oeu055488.1 Olea europaea HOM05D005813 ORTHO05D007310 1.6e-77 293.5 268 56.7
GSVIVG01027606001 Vitis vinifera HOM05D005813 ORTHO05D007310 2.7e-77 292.7 221 63.8
Actinidia12685 Actinidia chinensis HOM05D005813 ORTHO05D007310 4.5e-77 292.0 237 59.9
EL10Ac1g00888 Beta vulgaris HOM05D005813 ORTHO05D007310 1.7e-76 290.0 241 57.3
Gorai.004G040800 Gossypium raimondii HOM05D005813 ORTHO05D007310 2.3e-76 289.7 287 50.9
HanXRQChr04g0122421 Helianthus annuus HOM05D005813 ORTHO05D007310 8.6e-76 287.7 239 58.6
HPP92_003519 Vanilla planifolia HOM05D005813 ORTHO05D007310 1.5e-75 287.0 242 58.3
Nitab4.5_0000457g0240 Nicotiana tabacum HOM05D005813 ORTHO05D007310 4.2e-75 285.4 251 56.6
AUR62013635 Chenopodium quinoa HOM05D005813 ORTHO05D007310 5.5e-75 285.0 252 55.6
Haze_16813 Corylus avellana HOM05D005813 ORTHO05D007310 9.5e-75 284.3 211 65.4
SEGI_07293 Sequoiadendron giganteum HOM05D005813 ORTHO05D007310 1.2e-74 283.9 241 55.2
Sed0000354 Sechium edule HOM05D005813 ORTHO05D007310 1.8e-73 280.0 216 60.2
Dinv43710 Davidia involucrata HOM05D005813 ORTHO05D007310 4.4e-72 275.4 203 66.0
Rhsim01G0147300 Rhododendron simsii HOM05D005813 ORTHO05D007310 6.3e-71 271.6 268 51.9
FAN03G1318 Fragaria x ananassa HOM05D005813 ORTHO05D007310 7.8e-69 264.6 203 64.5
Zm00001eb065090 Zea mays HOM05D005813 ORTHO05D007310 7.8e-69 264.6 241 54.4
unitig_76.g29089 Utricularia gibba HOM05D005813 ORTHO05D007310 3.9e-68 262.3 203 63.1
AagrBONN_evm.TU.Sc2ySwM_117.33 Anthoceros agrestis HOM05D005813 ORTHO05D007310 4.3e-67 258.8 266 50.0
Mapoly0037s0016 Marchantia polymorpha HOM05D005813 ORTHO05D007310 5.6e-67 258.5 240 50.4
Pp3c19_7620 Physcomitrium patens HOM05D005813 ORTHO05D007310 2.6e-64 249.6 240 50.8
Psat3g115920 Pisum sativum HOM05D005813 ORTHO05D007310 1.3e-63 247.3 241 53.5
Peaxi162Scf00013g03441 Petunia axillaris HOM05D005813 ORTHO05D007310 1.9e-62 243.4 203 59.1
DCAR_015903 Daucus carota HOM05D005813 ORTHO05D007310 2.0e-61 240.0 236 53.8
SMO367G0685 Selaginella moellendorffii HOM05D005813 ORTHO05D007310 2.5e-59 233.0 242 48.3
Actinidia33466 Actinidia chinensis HOM05D005813 ORTHO05D007310 5.6e-59 231.9 176 61.4
CBR_g23070 Chara braunii HOM05D005813 ORTHO05D007310 5.2e-57 225.3 245 45.3
SHI01708 Sapria himalayana HOM05D005813 ORTHO05D007310 1.5e-56 223.8 241 47.7
CBR_g21297 Chara braunii HOM05D005813 ORTHO05D007310 4.1e-54 215.7 249 43.0
PSO478G0826 Papaver somniferum HOM05D005813 ORTHO05D007310 4.4e-48 195.7 156 61.5
COL.COLO4_12543 Corchorus olitorius HOM05D005813 ORTHO05D007310 2.1e-45 186.8 241 41.5
Psat3g202640 Pisum sativum HOM05D005813 ORTHO05D007310 3.6e-42 176.0 162 56.8
PSO478G4170 Papaver somniferum HOM05D005813 ORTHO05D007310 3.4e-32 142.9 87 82.8
Cre02.g102450 Chlamydomonas reinhardtii HOM05D005813 ORTHO05D007310 2.7e-29 133.3 239 35.1
MCO05G082 Micromonas commoda HOM05D005813 ORTHO05D007310 1.3e-20 104.4 227 33.0
Zm00001eb386980 Zea mays HOM05D000002 ORTHO05D006339 4.2e-06 56.2 159 27.7
Os06g0644600 Oryza sativa ssp. japonica HOM05D000002 ORTHO05D006339 5.5e-06 55.8 166 28.3


User provided reference genes

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