Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 9.6e-115 416.8 200 100.0
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 1.5e-67 260.0 146 86.3
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 3.0e-52 209.1 132 74.2
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 5.2e-52 208.4 132 72.7
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 6.8e-52 208.0 133 73.7
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.2e-51 207.2 133 73.7
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 3.4e-51 205.7 155 64.5
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 3.4e-51 205.7 133 71.4
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 7.5e-51 204.5 133 71.4
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 1.3e-50 203.8 136 69.1
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 2.2e-50 203.0 133 73.7
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 3.7e-50 202.2 139 68.3
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 3.7e-50 202.2 146 67.8
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 4.8e-50 201.8 129 70.5
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 6.3e-50 201.4 125 74.4
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 6.3e-50 201.4 133 70.7
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 1.1e-49 200.7 154 62.3
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 1.4e-49 200.3 136 69.9
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 1.8e-49 199.9 158 63.9
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 1.8e-49 199.9 129 72.9
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 2.4e-49 199.5 147 63.9
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 3.1e-49 199.1 137 67.2
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 5.4e-49 198.4 126 73.0
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 2.0e-48 196.4 157 61.8
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 2.0e-48 196.4 127 70.9
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 2.7e-48 196.1 142 66.9
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 2.7e-48 196.1 129 71.3
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 3.5e-48 195.7 157 61.8
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 3.5e-48 195.7 157 61.8
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 4.5e-48 195.3 157 61.1
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 5.9e-48 194.9 128 67.2
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 5.9e-48 194.9 133 70.7
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 5.9e-48 194.9 157 63.7
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 7.7e-48 194.5 128 68.8
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 7.7e-48 194.5 157 61.8
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.3e-47 193.7 127 70.1
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 1.3e-47 193.7 130 71.5
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.7e-47 193.4 126 69.8
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 1.7e-47 193.4 125 72.0
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 2.3e-47 193.0 133 69.9
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 2.9e-47 192.6 127 71.7
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 3.8e-47 192.2 126 69.8
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 6.5e-47 191.4 124 71.0
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 1.5e-46 190.3 132 67.4
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 1.9e-46 189.9 127 68.5
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 2.5e-46 189.5 130 68.5
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 2.5e-46 189.5 175 53.1
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 3.3e-46 189.1 127 70.9
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 4.2e-46 188.7 129 66.7
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 5.5e-46 188.3 169 56.2
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 7.2e-46 188.0 148 60.1
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 7.2e-46 188.0 138 65.9
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 7.2e-46 188.0 138 65.9
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 1.2e-45 187.2 128 66.4
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.6e-45 186.8 145 64.1
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 1.6e-45 186.8 133 66.9
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 2.8e-45 186.0 191 52.4
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 3.6e-45 185.7 145 62.1
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 4.7e-45 185.3 160 60.6
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 6.1e-45 184.9 124 69.4
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 8.0e-45 184.5 160 60.0
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 8.0e-45 184.5 160 60.0
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 1.0e-44 184.1 123 69.1
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.0e-44 184.1 151 60.9
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 1.8e-44 183.3 129 64.3
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 1.8e-44 183.3 124 67.7
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.8e-44 183.3 127 66.9
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.8e-44 183.3 121 70.2
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 3.0e-44 182.6 147 59.2
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 3.0e-44 182.6 118 72.0
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 4.0e-44 182.2 143 60.1
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 6.8e-44 181.4 132 67.4
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 8.9e-44 181.0 151 60.3
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 1.5e-43 180.3 156 57.7
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 2.0e-43 179.9 130 63.8
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 5.7e-43 178.3 184 51.6
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 9.8e-43 177.6 102 74.5
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.3e-42 177.2 100 75.0
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 2.8e-42 176.0 177 55.9
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 6.3e-42 174.9 152 55.9
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 1.1e-41 174.1 152 57.2
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 2.4e-41 172.9 127 63.8
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 3.1e-41 172.6 102 71.6
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 1.2e-40 170.6 172 52.3
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.7e-39 166.8 136 61.8
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 3.8e-39 165.6 99 72.7
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 8.6e-39 164.5 100 71.0
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 5.2e-36 155.2 112 66.1
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 2.0e-35 153.3 188 44.7
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.8e-33 146.7 90 67.8
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 2.4e-33 146.4 93 67.7
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 7.0e-33 144.8 116 56.9
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 1.2e-32 144.1 100 59.0
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 1.3e-31 140.6 126 53.2
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 2.1e-29 133.3 106 53.8
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 5.2e-28 128.6 148 47.3
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 1.2e-27 127.5 90 58.9
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 2.9e-26 122.9 148 42.6
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 6.4e-26 121.7 133 47.4
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 1.1e-25 120.9 145 46.9
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.3e-23 114.0 128 48.4
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 6.6e-23 111.7 152 42.1
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 8.6e-23 111.3 77 66.2
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 2.3e-20 103.2 59 71.2
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 1.6e-16 90.5 88 46.6
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 7.8e-08 61.6 53 58.5
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 9.6e-06 54.7 42 52.4


User provided reference genes

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