Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 8.7e-165 583.6 294 100.0
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 1.4e-93 347.1 276 69.9
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 2.2e-67 260.0 292 52.4
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 1.3e-64 250.8 267 54.7
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 7.1e-58 228.4 264 52.3
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 2.7e-57 226.5 264 52.3
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 4.6e-57 225.7 273 51.3
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 1.0e-48 198.0 153 68.6
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 6.7e-48 195.3 153 68.0
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 6.2e-46 188.7 287 47.4
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 7.6e-44 181.8 304 44.4
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 2.9e-43 179.9 266 46.2
PSO063G2684 Papaver somniferum HOM05D004787 ORTHO05D304724 5.1e-40 169.1 245 46.1
PSO063G0043 Papaver somniferum HOM05D004787 ORTHO05D006972 1.8e-37 160.6 295 42.4
PSO063G4343 Papaver somniferum HOM05D004787 ORTHO05D304254 1.8e-37 160.6 245 45.7
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 1.3e-35 154.5 321 36.4
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 2.9e-35 153.3 214 48.1
PSO063G1019 Papaver somniferum HOM05D004787 ORTHO05D006972 1.3e-32 144.4 202 49.5
PSO198G0032 Papaver somniferum HOM05D004787 ORTHO05D006972 8.7e-32 141.7 203 46.3
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 4.3e-31 139.4 302 35.1
PSO478G1956 Papaver somniferum HOM05D004787 ORTHO05D006972 1.6e-30 137.5 219 45.2
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 2.2e-30 137.1 302 35.4
PSO478G4874 Papaver somniferum HOM05D004787 ORTHO05D006972 2.8e-30 136.7 220 45.0
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 2.4e-29 133.7 295 35.6
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 3.1e-29 133.3 295 35.6
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 3.1e-29 133.3 295 35.6
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 4.1e-29 132.9 294 35.7
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 5.3e-29 132.5 302 34.4
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 9.1e-29 131.7 294 36.1
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 1.2e-28 131.3 294 35.0
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 1.2e-28 131.3 302 34.4
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 2.0e-28 130.6 302 34.1
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 2.0e-28 130.6 300 35.7
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 2.6e-28 130.2 302 34.1
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 3.4e-28 129.8 290 34.5
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 5.9e-28 129.0 302 33.8
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 7.7e-28 128.6 302 33.8
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 7.7e-28 128.6 302 33.8
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 7.7e-28 128.6 300 35.0
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 1.3e-27 127.9 294 36.1
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 1.3e-27 127.9 294 36.1
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 1.3e-27 127.9 294 35.4
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 1.7e-27 127.5 301 33.9
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 1.7e-27 127.5 294 35.7
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 1.7e-27 127.5 300 34.3
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 1.7e-27 127.5 312 34.0
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 2.2e-27 127.1 300 34.7
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 2.9e-27 126.7 302 33.4
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 5.0e-27 125.9 183 47.0
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 5.0e-27 125.9 299 35.1
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 6.5e-27 125.6 300 33.7
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 8.5e-27 125.2 300 33.7
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 8.5e-27 125.2 299 35.1
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 1.1e-26 124.8 302 33.8
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 1.1e-26 124.8 302 33.8
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 1.1e-26 124.8 294 35.4
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 1.4e-26 124.4 294 34.4
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 2.5e-26 123.6 302 33.4
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 2.5e-26 123.6 302 33.8
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 2.5e-26 123.6 300 34.0
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 2.5e-26 123.6 300 32.7
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 3.2e-26 123.2 302 33.1
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 3.2e-26 123.2 300 33.7
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 4.2e-26 122.9 302 33.1
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 5.5e-26 122.5 302 32.8
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 9.4e-26 121.7 296 34.5
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 9.4e-26 121.7 183 46.4
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 9.4e-26 121.7 302 32.8
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 1.2e-25 121.3 295 34.6
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 1.6e-25 120.9 295 34.6
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 2.1e-25 120.6 296 34.1
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 2.7e-25 120.2 302 33.4
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 3.6e-25 119.8 296 33.8
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 3.6e-25 119.8 299 33.8
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 3.6e-25 119.8 300 33.0
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 3.6e-25 119.8 300 33.0
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 3.6e-25 119.8 300 33.0
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 3.6e-25 119.8 302 32.5
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 4.6e-25 119.4 294 34.4
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 4.6e-25 119.4 300 33.0
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 7.9e-25 118.6 297 31.3
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.4e-24 117.9 302 32.5
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 1.8e-24 117.5 300 33.0
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.8e-24 117.5 311 32.2
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 1.8e-24 117.5 296 33.8
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 2.3e-24 117.1 306 32.7
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 2.3e-24 117.1 296 32.8
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 3.0e-24 116.7 291 32.6
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 3.0e-24 116.7 296 33.1
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 3.9e-24 116.3 302 32.1
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 6.7e-24 115.5 300 32.3
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 6.7e-24 115.5 302 31.8
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 6.7e-24 115.5 334 31.7
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 8.8e-24 115.2 287 30.0
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 1.1e-23 114.8 311 33.4
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 1.1e-23 114.8 305 33.8
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 2.6e-23 113.6 296 31.8
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 3.3e-23 113.2 234 37.2
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 4.4e-23 112.8 304 32.2
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 4.4e-23 112.8 300 32.7
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 5.7e-23 112.5 299 32.8
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 1.7e-22 110.9 212 39.6
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 1.7e-22 110.9 294 32.7
PSO063G3648 Papaver somniferum HOM05D004787 ORTHO05D006972 3.7e-22 109.8 140 47.9
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 3.7e-22 109.8 234 36.8
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 1.1e-21 108.2 252 34.5
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 1.4e-21 107.8 268 34.3
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 1.8e-21 107.5 292 31.8
PSO063G5300 Papaver somniferum HOM05D004787 ORTHO05D006972 4.1e-21 106.3 151 45.0
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 2.0e-20 104.0 297 29.6
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 2.0e-20 104.0 297 29.6
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 2.6e-20 103.6 273 29.7
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 7.7e-20 102.1 298 30.9
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 1.0e-19 101.7 298 29.9
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 1.3e-19 101.3 288 31.6
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 1.3e-19 101.3 244 32.4
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 3.8e-19 99.8 275 30.2
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 5.0e-19 99.4 294 29.6
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 5.0e-19 99.4 298 29.5
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 6.5e-19 99.0 300 31.3
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 4.2e-18 96.3 295 29.5
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 5.5e-18 95.9 295 29.5
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 2.7e-17 93.6 243 32.1
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 1.8e-16 90.9 390 26.9
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 3.9e-16 89.7 381 26.0
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 6.7e-16 89.0 298 28.5
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 2.0e-15 87.4 301 28.9
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 3.3e-15 86.7 234 30.8
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 5.3e-13 79.3 184 34.8
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 1.6e-12 77.8 240 29.6
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 2.6e-12 77.0 184 34.2
Cc07_g12650 Coffea canephora HOM05D004787 ORTHO05D006972 4.2e-10 69.7 137 37.2
PSO384G2298 Papaver somniferum HOM05D004787 ORTHO05D006972 5.5e-10 69.3 152 34.9
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 6.1e-09 65.9 149 33.6
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 1.8e-08 64.3 132 34.1


User provided reference genes

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