Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 7.0e-66 254.2 171 100.0
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 1.5e-63 246.5 171 98.2
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 7.3e-39 164.5 174 74.1
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.8e-37 159.8 172 74.4
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 5.4e-34 148.3 172 67.4
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 9.3e-34 147.5 172 69.8
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 9.3e-34 147.5 168 70.2
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.2e-33 147.1 172 66.9
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.2e-33 147.1 172 67.4
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 2.1e-33 146.4 170 71.8
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 2.7e-33 146.0 174 70.1
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 2.7e-33 146.0 172 69.8
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 4.6e-33 145.2 172 68.6
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 6.0e-33 144.8 173 68.8
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 7.8e-33 144.4 175 68.0
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.0e-32 144.1 161 73.9
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 1.7e-32 143.3 172 71.5
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 3.9e-32 142.1 153 75.8
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 5.1e-32 141.7 171 69.0
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 8.7e-32 141.0 172 68.0
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 1.1e-31 140.6 173 69.9
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 1.9e-31 139.8 126 84.1
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 2.5e-31 139.4 174 68.4
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 2.5e-31 139.4 167 69.5
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 3.3e-31 139.0 175 66.9
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 4.3e-31 138.7 134 80.6
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 9.6e-31 137.5 172 69.8
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 1.3e-30 137.1 145 75.9
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 1.6e-30 136.7 182 67.6
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 3.6e-30 135.6 168 69.0
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 3.6e-30 135.6 172 66.3
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 4.8e-30 135.2 170 68.2
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 4.8e-30 135.2 168 67.3
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 6.2e-30 134.8 180 64.4
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 8.1e-30 134.4 168 67.9
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.8e-29 133.3 166 66.9
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 4.0e-29 132.1 175 66.9
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 4.0e-29 132.1 162 67.3
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 6.9e-29 131.3 168 67.9
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 9.0e-29 131.0 168 66.7
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 9.0e-29 131.0 168 66.7
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.2e-28 130.6 168 66.1
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 1.2e-28 130.6 167 66.5
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 1.2e-28 130.6 172 66.9
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 1.5e-28 130.2 161 68.9
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.5e-28 130.2 132 78.8
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 1.5e-28 130.2 135 77.8
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 2.6e-28 129.4 167 67.7
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 3.4e-28 129.0 169 66.9
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 4.5e-28 128.6 166 65.7
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 5.8e-28 128.3 167 65.3
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 5.8e-28 128.3 141 73.8
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 7.6e-28 127.9 132 76.5
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 7.6e-28 127.9 172 66.3
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 9.9e-28 127.5 152 69.7
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 9.9e-28 127.5 152 69.7
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 9.9e-28 127.5 136 78.7
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 1.7e-27 126.7 150 70.7
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.7e-27 126.7 128 80.5
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 2.2e-27 126.3 169 66.3
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 3.8e-27 125.6 167 68.9
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 4.9e-27 125.2 166 64.5
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 6.4e-27 124.8 135 77.8
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 6.4e-27 124.8 173 66.5
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 8.4e-27 124.4 170 65.9
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 8.4e-27 124.4 116 83.6
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 8.4e-27 124.4 116 83.6
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 1.4e-26 123.6 106 62.3
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 1.4e-26 123.6 136 75.7
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 1.9e-26 123.2 166 66.3
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 1.9e-26 123.2 130 78.5
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.4e-26 122.9 106 63.2
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 2.4e-26 122.9 167 65.3
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 5.4e-26 121.7 168 65.5
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 1.2e-25 120.6 129 63.6
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 1.2e-25 120.6 134 76.1
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 1.6e-25 120.2 167 66.5
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 1.6e-25 120.2 168 64.9
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 7.9e-25 117.9 135 71.1
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 1.3e-24 117.1 146 70.5
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 3.9e-24 115.5 128 76.6
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 8.7e-24 114.4 118 83.1
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 1.1e-23 114.0 130 73.1
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 1.6e-22 110.2 119 77.3
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 2.8e-22 109.4 128 60.2
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 1.1e-21 107.5 166 60.8
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 3.1e-21 105.9 143 67.8
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 3.1e-21 105.9 140 68.6
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 6.9e-21 104.8 148 52.0
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.5e-20 103.6 84 61.9
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 2.6e-20 102.8 125 46.4
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 4.5e-20 102.1 115 72.2
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 5.5e-18 95.1 131 66.4
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 1.1e-15 87.4 127 69.3
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 3.1e-13 79.3 132 62.1
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 5.3e-13 78.6 130 43.1
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 1.5e-12 77.0 137 58.4
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 4.5e-12 75.5 91 67.0
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 5.0e-11 72.0 122 66.4
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 8.4e-11 71.2 64 59.4
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 5.5e-10 68.6 102 37.3
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 9.7e-07 57.8 141 55.3
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 2.2e-06 56.6 34 82.4


User provided reference genes

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