Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 0.0e+00 1236.5 612 100.0
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 1.8e-241 839.3 632 66.0
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 1.1e-235 820.1 645 64.0
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 2.5e-230 802.4 636 62.6
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 1.2e-208 730.3 639 57.7
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 2.7e-208 729.2 600 61.3
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 1.9e-206 723.0 603 60.2
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 7.3e-206 721.1 601 58.9
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 7.3e-206 721.1 599 59.4
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 1.2e-205 720.3 606 60.1
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 2.1e-205 719.5 610 58.5
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 8.0e-205 717.6 644 57.3
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 1.2e-203 713.8 598 58.4
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 1.5e-203 713.4 609 59.3
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 1.5e-203 713.4 645 57.8
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 7.5e-203 711.1 600 59.2
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 6.4e-202 708.0 602 60.0
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 8.3e-202 707.6 606 59.1
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 1.1e-201 707.2 638 57.1
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 4.1e-201 705.3 596 58.9
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 3.5e-200 702.2 603 59.2
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 2.3e-199 699.5 637 56.8
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 6.6e-199 698.0 643 56.6
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 1.5e-198 696.8 610 60.0
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 1.5e-198 696.8 645 56.9
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 5.6e-198 694.9 630 56.2
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 1.2e-197 693.7 506 67.4
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 1.2e-197 693.7 640 55.6
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.6e-197 693.3 644 56.4
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 1.1e-196 690.6 616 57.1
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 5.2e-196 688.3 644 55.7
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 6.8e-196 688.0 627 56.1
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 8.9e-196 687.6 635 55.1
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 8.9e-196 687.6 644 56.4
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 8.9e-196 687.6 644 56.4
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 3.4e-195 685.6 624 57.1
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 5.8e-195 684.9 614 56.4
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 9.8e-195 684.1 615 56.9
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 3.7e-194 682.2 633 55.6
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 6.4e-194 681.4 633 55.6
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 1.1e-193 680.6 620 55.6
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 1.9e-193 679.9 615 56.7
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 7.1e-193 677.9 643 54.7
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 7.1e-193 677.9 624 55.0
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 1.6e-192 676.8 630 56.7
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 1.6e-192 676.8 606 55.9
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 3.5e-192 675.6 634 56.3
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 1.0e-191 674.1 613 57.1
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 1.7e-191 673.3 615 56.4
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 3.9e-191 672.2 623 55.2
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 3.9e-191 672.2 503 63.4
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 6.6e-191 671.4 614 56.2
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.1e-190 670.6 503 63.2
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 1.2e-189 667.2 529 63.1
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 2.1e-189 666.4 615 56.1
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 3.6e-189 665.6 445 70.1
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 4.7e-189 665.2 607 56.8
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 4.7e-189 665.2 616 56.5
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 1.1e-188 664.1 607 55.8
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 1.4e-188 663.7 605 56.5
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 3.1e-188 662.5 616 56.2
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 2.0e-187 659.8 625 55.7
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 3.4e-187 659.1 613 56.3
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 4.4e-187 658.7 613 55.5
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 5.8e-187 658.3 617 55.6
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 2.9e-186 656.0 669 52.0
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 9.2e-185 651.0 594 55.2
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 9.2e-185 651.0 601 55.6
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 7.8e-184 647.9 628 53.3
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 6.6e-183 644.8 609 54.5
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 1.5e-182 643.7 622 55.0
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 2.5e-182 642.9 608 54.3
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 3.6e-181 639.0 605 54.5
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 5.2e-180 635.2 539 58.3
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 3.4e-179 632.5 610 53.3
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 4.9e-178 628.6 441 67.3
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 3.9e-175 619.0 528 57.0
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 5.1e-175 618.6 518 59.5
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 2.1e-173 613.2 502 62.2
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 4.9e-170 602.1 517 58.2
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 1.8e-167 593.6 663 50.2
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 1.8e-167 593.6 598 52.7
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 4.8e-165 585.5 542 55.2
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 1.1e-161 574.3 551 53.7
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 3.0e-159 566.2 391 68.3
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 3.0e-159 566.2 391 68.3
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 4.8e-157 558.9 386 70.2
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 4.0e-156 555.8 524 54.4
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 6.9e-156 555.1 596 50.0
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 3.4e-155 552.7 535 52.7
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 1.2e-152 544.3 400 66.2
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 1.1e-150 537.7 602 48.2
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 3.3e-150 536.2 523 53.9
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 7.4e-150 535.0 384 67.4
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 1.1e-148 531.2 390 65.1
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.5e-147 527.3 517 54.0
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 2.0e-147 526.9 390 64.4
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 7.2e-145 518.5 462 55.2
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 1.3e-138 497.7 447 56.4
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 1.2e-136 491.1 446 57.4
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 3.6e-136 489.6 462 55.2
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 1.3e-133 481.1 501 51.7
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 2.6e-131 473.4 513 48.9
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 8.5e-130 468.4 455 54.1
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 6.1e-128 462.2 382 58.9
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 7.7e-123 445.3 459 50.3
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 1.5e-121 441.0 457 49.9
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 2.1e-120 437.2 509 46.6
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 1.7e-117 427.6 340 62.6
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 4.8e-117 426.0 519 44.1
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 4.1e-116 422.9 505 44.0
QL01p050313 Quercus lobata HOM05D005279 ORTHO05D006757 1.1e-108 398.3 264 70.8
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 4.9e-101 372.9 507 43.4
PGSC0003DMG402016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 7.0e-100 369.0 257 67.7
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 8.0e-96 355.5 449 40.5
EL10Ac2g04762 Beta vulgaris HOM05D005279 ORTHO05D006757 5.2e-95 352.8 305 54.4
CDE02G4206 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 1.2e-91 341.7 276 59.8
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 3.9e-90 336.7 387 46.5
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 6.2e-88 329.3 312 55.8
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 1.8e-79 301.2 539 35.4
CDE12G0554 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 6.6e-74 282.7 203 62.6
RcHm_v2.0_Chr2g0115301 Rosa chinensis HOM05D005279 ORTHO05D006757 9.3e-52 209.1 160 63.1
Ah.16g102880 Amaranthus hybridus HOM05D005279 ORTHO05D006757 8.7e-50 202.6 195 49.2
RcHm_v2.0_Chr7g0239281 Rosa chinensis HOM05D005279 ORTHO05D006757 2.3e-42 177.9 132 63.6
Actinidia34772 Actinidia chinensis HOM05D005279 ORTHO05D006757 2.1e-40 171.4 121 62.8
MD04G1241700 Malus domestica HOM05D005279 ORTHO05D006757 3.1e-39 167.5 254 40.2
Nitab4.5_0000276g0080 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.0e-37 162.5 126 64.3
PGSC0003DMG401016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.7e-37 161.8 243 39.5
Nitab4.5_0000456g0110 Nicotiana tabacum HOM05D005279 ORTHO05D006757 8.4e-37 159.5 126 63.5
Haze_04527 Corylus avellana HOM05D005279 ORTHO05D006757 3.2e-36 157.5 206 46.1
QL01p050319 Quercus lobata HOM05D005279 ORTHO05D006757 3.2e-28 131.0 161 48.4
Lju5221A0T19 Lonicera japonica HOM05D005279 ORTHO05D006757 7.9e-27 126.3 153 45.8
CSS0049023 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.1e-25 122.5 211 39.8
Hma1.2p1_0171F.1_g075730 Hydrangea macrophylla HOM05D005279 ORTHO05D006757 1.8e-23 115.2 94 62.8
Oeu010148.1 Olea europaea HOM05D005279 ORTHO05D006757 3.3e-17 94.4 98 52.0
SEGI_28852 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 4.8e-16 90.5 78 59.0
HPP92_025241 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.9e-12 78.6 139 36.0
Hund21883 Selenicereus undatus HOM05D005279 ORTHO05D037448 8.8e-10 69.7 71 52.1
Hund30008 Selenicereus undatus HOM05D005279 ORTHO05D037448 8.8e-10 69.7 71 52.1
QL01p050333 Quercus lobata HOM05D005279 ORTHO05D037448 1.8e-07 62.0 54 57.4
MBI07_g25289_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D243422 4.5e-06 57.4 51 49.0


User provided reference genes

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