Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 3.3e-203 711.4 352 100.0
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 4.3e-195 684.5 352 96.0
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 6.4e-130 468.0 354 68.6
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 6.2e-125 451.4 352 65.9
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 1.4e-124 450.3 353 66.0
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 4.6e-120 435.3 357 62.7
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 4.3e-118 428.7 352 63.1
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 1.1e-116 424.1 350 62.3
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 5.2e-116 421.8 343 63.8
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 2.6e-115 419.5 353 61.2
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 4.4e-115 418.7 350 61.1
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 7.6e-115 417.9 356 59.8
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 1.3e-114 417.2 347 63.7
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 4.9e-114 415.2 350 62.0
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 7.1e-113 411.4 366 59.3
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 9.3e-113 411.0 338 60.9
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 1.2e-112 410.6 344 61.9
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 2.3e-111 406.4 371 58.2
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 3.9e-111 405.6 356 60.4
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 3.9e-111 405.6 351 60.7
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 5.1e-111 405.2 351 59.8
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 6.6e-111 404.8 351 59.8
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 1.5e-110 403.7 357 58.3
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 2.5e-110 402.9 353 61.2
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 3.3e-110 402.5 353 60.1
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 4.3e-110 402.1 347 60.8
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 1.3e-109 400.6 267 70.4
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 1.6e-109 400.2 257 71.2
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 2.1e-109 399.8 338 63.6
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 1.1e-108 397.5 341 62.5
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 1.4e-108 397.1 311 66.9
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 5.3e-108 395.2 265 69.8
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 2.6e-107 392.9 337 61.4
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 2.6e-107 392.9 355 58.9
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 5.8e-107 391.7 352 57.7
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 9.9e-107 391.0 242 76.0
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 1.7e-106 390.2 269 70.3
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 4.9e-106 388.7 313 63.6
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.4e-105 387.1 324 61.1
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 1.9e-105 386.7 336 59.5
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 1.6e-104 383.6 401 54.4
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 2.7e-104 382.9 264 68.2
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.7e-103 380.2 353 58.4
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 2.3e-103 379.8 279 67.0
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 1.1e-102 377.5 289 64.4
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 7.4e-102 374.8 287 62.4
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 1.6e-101 373.6 335 57.9
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 1.6e-101 373.6 291 64.3
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 1.6e-101 373.6 335 59.4
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 1.6e-101 373.6 352 57.7
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 4.8e-101 372.1 257 69.6
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 1.8e-100 370.2 348 58.0
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 3.1e-100 369.4 356 55.9
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 9.0e-100 367.9 222 76.6
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 4.5e-99 365.5 237 70.9
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 4.5e-99 365.5 232 70.7
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 5.8e-99 365.2 358 54.7
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 3.8e-98 362.5 347 55.0
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 1.2e-96 357.5 351 53.6
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 2.1e-96 356.7 217 76.5
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 1.0e-95 354.4 229 70.7
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 3.0e-95 352.8 353 54.7
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 6.7e-95 351.7 341 54.0
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 8.7e-95 351.3 212 74.5
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 1.9e-94 350.1 350 51.7
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 4.3e-94 349.0 310 60.6
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 5.6e-94 348.6 380 50.8
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 2.8e-93 346.3 358 51.1
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 2.8e-93 346.3 353 52.1
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 4.8e-93 345.5 354 52.0
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 1.8e-92 343.6 335 54.3
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 3.1e-92 342.8 218 74.3
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 9.0e-92 341.3 336 54.8
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 9.0e-92 341.3 336 54.8
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 3.4e-91 339.3 336 54.2
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 1.0e-90 337.8 207 77.3
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 1.0e-90 337.8 441 46.5
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 1.7e-90 337.0 352 54.3
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 1.7e-90 337.0 352 51.4
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 2.2e-90 336.7 287 57.5
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 8.4e-90 334.7 220 72.3
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 1.1e-89 334.3 336 54.5
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.5e-86 323.9 363 52.1
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.5e-86 323.9 363 52.1
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 2.4e-84 316.6 215 70.2
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 4.1e-84 315.8 290 55.9
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 3.2e-81 306.2 174 80.5
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 2.7e-80 303.1 200 70.0
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 2.4e-76 290.0 322 49.4
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 2.0e-75 287.0 351 48.1
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 2.2e-74 283.5 292 55.1
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 1.6e-72 277.3 222 57.2
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 3.1e-68 263.1 247 58.7
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 5.3e-68 262.3 218 56.0
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 9.1e-68 261.5 280 52.9
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 2.0e-67 260.4 238 53.8
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.8e-66 256.1 252 57.5
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 6.5e-66 255.4 294 49.0
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 1.6e-64 250.8 229 57.2
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 2.1e-64 250.4 258 53.5
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.5e-62 244.2 222 51.4
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 2.2e-61 240.4 285 50.5
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 1.2e-59 234.6 315 46.0
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 1.8e-47 194.1 236 43.2
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 1.6e-40 171.0 210 39.0
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 4.5e-35 152.9 177 52.0
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.1e-33 148.3 95 69.5
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 9.5e-33 145.2 95 69.5
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.2e-32 144.8 205 42.4
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 2.0e-27 127.5 82 69.5
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 2.3e-18 97.4 167 37.7
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 1.3e-13 81.6 47 74.5
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 2.2e-13 80.9 143 45.5
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 1.9e-09 67.8 48 64.6


User provided reference genes

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