Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 3.0e-285 984.6 514 100.0
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 2.8e-158 562.8 326 90.5
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 6.4e-70 269.2 342 50.9
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 3.9e-67 260.0 315 53.0
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 1.3e-62 245.0 343 49.0
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 7.5e-55 219.2 341 46.6
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 4.6e-52 209.9 340 45.6
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.7e-51 208.0 341 45.7
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 3.0e-51 207.2 339 45.7
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 2.5e-50 204.1 292 45.9
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 2.5e-50 204.1 340 44.7
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 2.5e-50 204.1 358 43.0
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 7.3e-50 202.6 353 45.9
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 8.1e-49 199.1 343 44.9
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 1.1e-48 198.7 339 44.0
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.4e-48 198.4 344 45.9
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 4.0e-48 196.8 307 45.6
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 1.2e-47 195.3 343 45.2
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 1.2e-47 195.3 344 45.3
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 3.4e-47 193.7 344 44.2
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 4.9e-46 189.9 338 42.9
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 6.4e-46 189.5 350 43.7
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 4.1e-45 186.8 340 43.2
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 5.4e-45 186.4 338 41.1
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 9.2e-45 185.7 343 42.3
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 3.5e-44 183.7 338 43.5
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 6.0e-44 183.0 310 44.5
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 6.0e-44 183.0 338 42.3
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 2.3e-43 181.0 340 41.5
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 5.1e-43 179.9 313 44.1
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 8.6e-43 179.1 341 41.3
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 1.5e-42 178.3 346 39.3
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 1.9e-42 177.9 349 43.6
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 3.3e-42 177.2 342 42.7
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 4.7e-41 173.3 354 39.3
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 4.0e-40 170.2 339 39.8
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 2.0e-39 167.9 339 40.1
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 1.3e-38 165.2 349 38.7
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 1.3e-38 165.2 350 41.4
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 2.2e-38 164.5 353 39.7
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 2.2e-38 164.5 393 37.9
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.8e-38 163.7 334 41.6
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 6.4e-38 162.9 336 42.0
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 8.4e-38 162.5 344 40.7
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 2.4e-37 161.0 346 40.8
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 2.4e-37 161.0 357 38.4
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.2e-37 160.6 334 42.2
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 5.4e-37 159.8 344 39.8
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 5.4e-37 159.8 349 37.5
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 3.0e-35 154.1 312 42.9
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 8.7e-35 152.5 313 36.4
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 4.8e-33 146.7 337 40.7
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 1.1e-32 145.6 342 36.3
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 1.8e-32 144.8 344 36.3
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 2.4e-32 144.4 345 37.1
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 1.5e-31 141.7 367 35.7
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 5.8e-31 139.8 302 38.4
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 8.4e-30 136.0 321 37.1
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.4e-29 135.2 319 38.2
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 3.2e-29 134.0 336 35.4
PSO210G6978 Papaver somniferum HOM05D000003 ORTHO05D001026 1.6e-28 131.7 135 53.3
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 3.5e-28 130.6 335 35.2
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 4.6e-28 130.2 271 37.6
PSO782G1412 Papaver somniferum HOM05D003407 ORTHO05D001026 1.0e-27 129.0 125 57.6
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 1.3e-27 128.6 260 37.7
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 2.3e-27 127.9 354 36.7
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 1.1e-26 125.6 292 36.3
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 1.9e-26 124.8 249 38.2
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 3.3e-26 124.0 338 33.1
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 5.6e-26 123.2 269 38.7
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 2.8e-25 120.9 228 39.0
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 4.8e-25 120.2 408 32.6
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 1.8e-24 118.2 332 34.9
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 6.9e-24 116.3 336 34.8
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 6.9e-24 116.3 347 33.1
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 9.0e-24 115.9 227 40.5
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 1.2e-23 115.5 335 37.3
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 9.9e-23 112.5 332 35.2
PSO832G2090 Papaver somniferum HOM05D000003 ORTHO05D000004 1.3e-22 112.1 91 62.6
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 1.7e-22 111.7 353 30.9
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 2.2e-22 111.3 350 36.3
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 6.4e-22 109.8 343 35.3
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 1.9e-21 108.2 308 34.4
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 3.2e-21 107.5 330 33.0
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 7.1e-21 106.3 310 33.5
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.2e-20 105.5 316 33.2
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 1.6e-20 105.1 336 35.1
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 2.1e-20 104.8 265 34.7
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 2.1e-20 104.8 331 32.6
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 4.6e-20 103.6 337 35.6
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 1.0e-19 102.4 278 35.3
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 1.3e-19 102.1 340 36.2
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.3e-19 102.1 235 37.9
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 1.8e-19 101.7 338 35.5
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 2.3e-19 101.3 303 33.0
PSO675G1606 Papaver somniferum HOM05D000003 ORTHO05D001026 8.7e-19 99.4 124 43.5
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 1.1e-18 99.0 331 33.5
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 1.9e-18 98.2 337 33.2
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 1.9e-18 98.2 194 39.7
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 1.9e-18 98.2 340 33.2
PSO170G6243 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-18 98.2 131 41.2
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 1.9e-18 98.2 155 46.5
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 2.5e-18 97.8 174 43.7
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 2.5e-18 97.8 338 33.4
PSO675G0166 Papaver somniferum HOM05D000003 ORTHO05D000004 7.4e-18 96.3 121 41.3
PSO384G4399 Papaver somniferum HOM05D000003 ORTHO05D001026 9.6e-18 95.9 126 40.5
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 2.1e-17 94.7 335 34.6
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 4.8e-17 93.6 230 36.1
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 1.8e-16 91.7 232 34.1
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 1.8e-16 91.7 245 34.7
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 3.1e-16 90.9 334 32.3
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 3.1e-16 90.9 335 30.7
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 3.1e-16 90.9 214 39.7
PSO063G3219 Papaver somniferum HOM05D000003 ORTHO05D000004 4.0e-16 90.5 121 40.5
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 1.0e-14 85.9 225 35.6
PSO478G2166 Papaver somniferum HOM05D000003 ORTHO05D000004 6.5e-14 83.2 107 42.1
PSO339G1863 Papaver somniferum HOM05D009877 ORTHO05D001026 8.4e-14 82.8 121 38.0
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 4.2e-13 80.5 314 33.1
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 9.3e-13 79.3 332 32.2
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 1.6e-12 78.6 272 32.0
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 3.5e-12 77.4 244 35.7
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 4.6e-12 77.0 241 32.4
PSO761G0149 Papaver somniferum HOM05D041719 ORTHO05D001026 2.3e-11 74.7 93 45.2
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 1.9e-10 71.6 194 34.5
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 6.3e-09 66.6 200 37.5
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 5.3e-08 63.5 240 30.4
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 1.2e-07 62.4 331 31.1
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 1.5e-07 62.0 211 33.2
PSO761G0419 Papaver somniferum HOM05D041719 ORTHO05D001026 3.4e-07 60.8 91 38.5
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 1.3e-06 58.9 199 32.2
SMO364G0101 Selaginella moellendorffii HOM05D006273 ORTHO05D007607 5.0e-06 57.0 347 26.8


User provided reference genes

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