Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1253 Papaver somniferum HOM05D004361 ORTHO05D004706 7.9e-99 364.0 213 100.0
CSS0045436 Camellia sinensis var. sinensis HOM05D004361 ORTHO05D004706 4.3e-12 75.9 211 33.6
Glyma.20G141000 Glycine max HOM05D004361 ORTHO05D004706 7.3e-12 75.1 211 33.6
Manes.16G012800 Manihot esculenta HOM05D004361 ORTHO05D004706 7.3e-12 75.1 211 35.5
VMungo0720G0988 Vigna mungo HOM05D004361 ORTHO05D004706 7.3e-12 75.1 207 34.8
CSS0034427 Camellia sinensis var. sinensis HOM05D004361 ORTHO05D004706 1.6e-11 73.9 208 34.1
COL.COLO4_31721 Corchorus olitorius HOM05D004361 ORTHO05D004706 4.7e-11 72.4 214 34.1
Glyma.10G252400 Glycine max HOM05D004361 ORTHO05D004706 4.7e-11 72.4 210 33.8
TAR629G1557 Trochodendron aralioides HOM05D004361 ORTHO05D004706 4.7e-11 72.4 223 34.5
Aqoxy4G01997 Aquilegia oxysepala HOM05D004361 ORTHO05D004706 1.4e-10 70.9 208 34.1
PGSC0003DMG400002067 Solanum tuberosum HOM05D004361 ORTHO05D004706 1.4e-10 70.9 219 33.3
vmacro03710 Vaccinium macrocarpon HOM05D004361 ORTHO05D004706 3.1e-10 69.7 206 32.0
Manes.17G034800 Manihot esculenta HOM05D004361 ORTHO05D004706 4.0e-10 69.3 199 35.2
vmacro15833 Vaccinium macrocarpon HOM05D004361 ORTHO05D004706 6.8e-10 68.6 211 33.6
Cc00_g17930 Coffea canephora HOM05D004361 ORTHO05D004706 1.5e-09 67.4 191 34.0
Sabra04G0012700 Salix brachista HOM05D004361 ORTHO05D004706 2.0e-09 67.0 194 33.0
TAR626G1160 Trochodendron aralioides HOM05D004361 ORTHO05D004706 2.6e-09 66.6 216 32.4
QL05p075222 Quercus lobata HOM05D004361 ORTHO05D004706 3.4e-09 66.2 210 31.4
Hma1.2p1_0091F.1_g046140 Hydrangea macrophylla HOM05D004361 ORTHO05D004706 4.4e-09 65.9 200 32.5
Actinidia14236 Actinidia chinensis HOM05D004361 ORTHO05D004706 5.8e-09 65.5 213 31.0
Rhsim02G0112300 Rhododendron simsii HOM05D004361 ORTHO05D004706 7.5e-09 65.1 204 30.4
Duzib235G0682 Durio zibethinus HOM05D004361 ORTHO05D004706 9.8e-09 64.7 203 32.5
Lalb_Chr16g0376351 Lupinus albus HOM05D004361 ORTHO05D004706 9.8e-09 64.7 204 31.9
Phvul.007G051800 Phaseolus vulgaris HOM05D004361 ORTHO05D004706 1.3e-08 64.3 213 33.8
Prupe.4G026600 Prunus persica HOM05D004361 ORTHO05D004706 1.3e-08 64.3 208 31.2
Cfa000279 Carpinus fangiana HOM05D004361 ORTHO05D004706 1.7e-08 63.9 209 30.6
CAN.G569.44 Capsicum annuum HOM05D004361 ORTHO05D004706 2.2e-08 63.5 210 33.8
Gohir.A06G208100 Gossypium hirsutum HOM05D004361 ORTHO05D004706 2.2e-08 63.5 188 34.6
Dinv17836 Davidia involucrata HOM05D004361 ORTHO05D004706 2.9e-08 63.2 208 33.7
Medtr1g105555 Medicago truncatula HOM05D004361 ORTHO05D004706 2.9e-08 63.2 213 32.4
Nitab4.5_0006795g0040 Nicotiana tabacum HOM05D004361 ORTHO05D004706 6.4e-08 62.0 208 32.2
Potri.011G026900 Populus trichocarpa HOM05D004361 ORTHO05D004706 8.3e-08 61.6 187 34.2
Solyc02g080110.3 Solanum lycopersicum HOM05D004361 ORTHO05D004706 8.3e-08 61.6 205 32.7
MBI02_g10098_MAGBIO Magnolia biondii HOM05D004361 ORTHO05D004706 1.1e-07 61.2 205 31.2
Potri.004G023000 Populus trichocarpa HOM05D004361 ORTHO05D004706 1.1e-07 61.2 185 32.4
Peaxi162Scf00678g00313 Petunia axillaris HOM05D004361 ORTHO05D004706 1.4e-07 60.8 205 31.7
Sopen02g024830 Solanum pennellii HOM05D004361 ORTHO05D004706 1.4e-07 60.8 201 33.3
Haze_06736 Corylus avellana HOM05D004361 ORTHO05D004706 1.9e-07 60.5 209 30.6
Glyma.11G003100 Glycine max HOM05D004361 ORTHO05D004706 1.9e-07 60.5 206 30.6
MSTRG.7243 Avicennia marina HOM05D004361 ORTHO05D004706 2.4e-07 60.1 190 32.1
Haze_06732 Corylus avellana HOM05D004361 ORTHO05D004706 2.4e-07 60.1 211 31.3
Gohir.D06G213000 Gossypium hirsutum HOM05D004361 ORTHO05D004706 2.4e-07 60.1 184 33.2
Lj5g0000713 Lotus japonicus HOM05D004361 ORTHO05D004706 2.4e-07 60.1 206 32.5
Oeu030986.1 Olea europaea HOM05D004361 ORTHO05D004706 2.4e-07 60.1 36 75.0
Thecc.06G213600 Theobroma cacao HOM05D004361 ORTHO05D004706 2.4e-07 60.1 209 32.1
Actinidia05535 Actinidia chinensis HOM05D004361 ORTHO05D004706 4.1e-07 59.3 188 31.9
Duzib192G0487 Durio zibethinus HOM05D004361 ORTHO05D004706 4.1e-07 59.3 210 32.4
Gohir.A10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 5.4e-07 58.9 198 31.8
MD10G1314300 Malus domestica HOM05D004361 ORTHO05D004706 5.4e-07 58.9 208 29.8
Lalb_Chr02g0144581 Lupinus albus HOM05D004361 ORTHO05D004706 7.1e-07 58.5 203 32.0
RcHm_v2.0_Chr5g0004031 Rosa chinensis HOM05D004361 ORTHO05D004706 7.1e-07 58.5 206 29.1
MSTRG.13161 Avicennia marina HOM05D004361 ORTHO05D004706 9.2e-07 58.2 41 63.4
TWI38G0935 Tripterygium wilfordii HOM05D004361 ORTHO05D004706 9.2e-07 58.2 214 29.0
TWI38G1626 Tripterygium wilfordii HOM05D004361 ORTHO05D004706 9.2e-07 58.2 215 29.3
Glyma.01G240500 Glycine max HOM05D004361 ORTHO05D004706 1.6e-06 57.4 48 56.2
Gohir.D10G015500 Gossypium hirsutum HOM05D004361 ORTHO05D004706 1.6e-06 57.4 198 31.3
Gorai.011G017100 Gossypium raimondii HOM05D004361 ORTHO05D004706 1.6e-06 57.4 198 31.3
arahy.Tifrunner.gnm1.ann1.QUZ1HU Arachis hypogaea HOM05D004361 ORTHO05D004706 2.1e-06 57.0 48 60.4
CiPaw.09G086700 Carya illinoinensis HOM05D004361 ORTHO05D004706 2.1e-06 57.0 209 28.7
Gorai.010G253100 Gossypium raimondii HOM05D004361 ORTHO05D004706 2.1e-06 57.0 186 33.3
Psat6g210400 Pisum sativum HOM05D004361 ORTHO05D004706 2.1e-06 57.0 216 29.6
CANSAT56G2280 Cannabis sativa HOM05D004361 ORTHO05D004706 2.7e-06 56.6 190 32.1
FAN25G3407 Fragaria x ananassa HOM05D004361 ORTHO05D004706 2.7e-06 56.6 206 31.1
PGR004G2667 Punica granatum HOM05D004361 ORTHO05D004706 2.7e-06 56.6 203 27.1
Sc05g0008860 Simmondsia chinensis HOM05D004361 ORTHO05D004706 2.7e-06 56.6 193 30.6
Sopen10g001370 Solanum pennellii HOM05D004361 ORTHO05D004706 2.7e-06 56.6 48 58.3
MSTRG.15964 Avicennia marina HOM05D004361 ORTHO05D004706 3.5e-06 56.2 207 28.0
Gohir.A06G145600 Gossypium hirsutum HOM05D004361 ORTHO05D004706 3.5e-06 56.2 201 31.8
Actinidia11836 Actinidia chinensis HOM05D004361 ORTHO05D004706 4.6e-06 55.8 208 29.8
CsaV3_6G049270 Cucumis sativus L. HOM05D004361 ORTHO05D004706 4.6e-06 55.8 214 27.1
Actinidia26950 Actinidia chinensis HOM05D004361 ORTHO05D004706 6.0e-06 55.5 156 32.1
FvH4_3g02690 Fragaria vesca HOM05D004361 ORTHO05D004706 7.8e-06 55.1 210 30.5
FAN21G0156 Fragaria x ananassa HOM05D004361 ORTHO05D004706 7.8e-06 55.1 210 29.0
Hund21376 Selenicereus undatus HOM05D004361 ORTHO05D004706 7.8e-06 55.1 47 61.7


User provided reference genes

Program Settings