Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G1036 Papaver somniferum HOM05D000101 ORTHO05D007021 9.6e-107 390.2 200 100.0
PSO017G1758 Papaver somniferum HOM05D000101 ORTHO05D007021 1.2e-101 373.2 200 95.5
Aqoxy2G03523 Aquilegia oxysepala HOM05D000101 ORTHO05D007021 3.3e-67 258.8 172 75.0
QL01p016256 Quercus lobata HOM05D000101 ORTHO05D007021 6.3e-66 254.6 193 70.5
Cpa.g.sc9.381 Carica papaya HOM05D000101 ORTHO05D007021 8.2e-66 254.2 190 70.0
Duzib150G0203 Durio zibethinus HOM05D000101 ORTHO05D007021 1.8e-65 253.1 192 69.8
Duzib150G0818 Durio zibethinus HOM05D000101 ORTHO05D007021 1.8e-65 253.1 192 69.8
Nn2g10490 Nelumbo nucifera HOM05D000101 ORTHO05D007021 2.4e-65 252.7 192 69.8
Thecc.09G252400 Theobroma cacao HOM05D000101 ORTHO05D007021 3.1e-65 252.3 200 69.0
Rhsim13G0204000 Rhododendron simsii HOM05D000101 ORTHO05D007021 4.1e-65 251.9 195 66.7
QL01p016239 Quercus lobata HOM05D000101 ORTHO05D007021 5.3e-65 251.5 193 69.4
Manes.01G177200 Manihot esculenta HOM05D000101 ORTHO05D007021 7.0e-65 251.1 170 76.5
TAR383G0318 Trochodendron aralioides HOM05D000101 ORTHO05D007021 7.0e-65 251.1 181 74.0
GSVIVG01037400001 Vitis vinifera HOM05D000101 ORTHO05D007021 7.0e-65 251.1 188 69.7
Glyma.20G043800 Glycine max HOM05D000101 ORTHO05D007021 1.6e-64 250.0 193 69.9
Gohir.D08G019100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 1.6e-64 250.0 195 70.3
Gorai.004G013600 Gossypium raimondii HOM05D000101 ORTHO05D007021 1.6e-64 250.0 195 70.3
TWI79G1559 Tripterygium wilfordii HOM05D000101 ORTHO05D007021 1.6e-64 250.0 197 69.0
CiPaw.13G147800 Carya illinoinensis HOM05D000101 ORTHO05D007021 2.0e-64 249.6 188 69.7
Glyma.07G235100 Glycine max HOM05D000101 ORTHO05D007021 2.0e-64 249.6 195 67.2
Gohir.A08G009100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 2.0e-64 249.6 195 69.2
TAR383G0810 Trochodendron aralioides HOM05D000101 ORTHO05D007021 2.6e-64 249.2 181 73.5
GSVIVG01037393001 Vitis vinifera HOM05D000101 ORTHO05D007021 2.6e-64 249.2 188 70.2
AUR62000226 Chenopodium quinoa HOM05D000101 ORTHO05D007021 3.5e-64 248.8 198 66.2
Potri.001G272100 Populus trichocarpa HOM05D000101 ORTHO05D007021 4.5e-64 248.4 190 70.0
A04p33060 Brassica napus HOM05D000101 ORTHO05D007021 7.7e-64 247.7 192 66.1
BraA04t18766Z Brassica rapa HOM05D000101 ORTHO05D007021 7.7e-64 247.7 192 66.1
CANSAT54G0276 Cannabis sativa HOM05D000101 ORTHO05D007021 7.7e-64 247.7 189 69.3
MSTRG.17651 Avicennia marina HOM05D000101 ORTHO05D007021 1.0e-63 247.3 188 68.6
Solyc06g073615.1 Solanum lycopersicum HOM05D000101 ORTHO05D007021 2.2e-63 246.1 194 65.5
Gorai.001G132800 Gossypium raimondii HOM05D000101 ORTHO05D007021 2.9e-63 245.7 195 68.7
Sopen06g030030 Solanum pennellii HOM05D000101 ORTHO05D007021 2.9e-63 245.7 194 65.5
VMungo0540G1253 Vigna mungo HOM05D000101 ORTHO05D007021 2.9e-63 245.7 191 68.1
Duzib170G0394 Durio zibethinus HOM05D000101 ORTHO05D007021 3.8e-63 245.4 199 67.8
Migut.N02406 Erythranthe guttata HOM05D000101 ORTHO05D007021 3.8e-63 245.4 170 71.8
Lj6g0006302 Lotus japonicus HOM05D000101 ORTHO05D007021 5.0e-63 245.0 193 66.3
COL.COLO4_33246 Corchorus olitorius HOM05D000101 ORTHO05D007021 6.5e-63 244.6 172 74.4
Eucgr.J00668 Eucalyptus grandis HOM05D000101 ORTHO05D007021 8.5e-63 244.2 187 67.9
Lalb_Chr06g0173421 Lupinus albus HOM05D000101 ORTHO05D007021 8.5e-63 244.2 196 64.3
Ciclev10016806m.g Citrus clementina HOM05D000101 ORTHO05D007021 1.5e-62 243.4 189 68.8
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 1.5e-62 243.4 185 67.6
PGR119G0271 Punica granatum HOM05D000101 ORTHO05D007021 1.5e-62 243.4 193 63.7
CAN.G65.208 Capsicum annuum HOM05D000101 ORTHO05D007021 2.5e-62 242.7 193 63.7
Psat5g198640 Pisum sativum HOM05D000101 ORTHO05D007021 3.2e-62 242.3 190 67.4
Lj6g0007250 Lotus japonicus HOM05D000101 ORTHO05D007021 4.2e-62 241.9 193 65.8
Medtr3g041720 Medicago truncatula HOM05D000101 ORTHO05D007021 4.2e-62 241.9 193 65.8
TPR.G11957 Trifolium pratense HOM05D000101 ORTHO05D007021 4.2e-62 241.9 196 64.3
ClCG02G022620 Citrullus lanatus HOM05D000101 ORTHO05D007021 5.5e-62 241.5 197 64.0
Haze_23275 Corylus avellana HOM05D000101 ORTHO05D007021 7.2e-62 241.1 177 71.2
Ca_25981_v3 Cicer arietinum L. HOM05D000101 ORTHO05D007021 9.4e-62 240.7 198 64.6
Peaxi162Scf00526g00083 Petunia axillaris HOM05D000101 ORTHO05D007021 1.2e-61 240.4 198 64.1
PGSC0003DMG400005919 Solanum tuberosum HOM05D000101 ORTHO05D007021 1.2e-61 240.4 194 64.9
Dinv29324 Davidia involucrata HOM05D000101 ORTHO05D007021 2.1e-61 239.6 188 66.5
MBI16_g00843_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D007021 2.1e-61 239.6 170 70.0
Oeu041722.1 Olea europaea HOM05D000101 ORTHO05D007021 2.1e-61 239.6 180 68.9
Dinv29322 Davidia involucrata HOM05D000101 ORTHO05D007021 2.7e-61 239.2 185 67.0
CsaV3_6G038720 Cucumis sativus L. HOM05D000101 ORTHO05D007021 3.6e-61 238.8 192 64.6
Sc06g0003480 Simmondsia chinensis HOM05D000101 ORTHO05D007021 3.6e-61 238.8 171 70.8
Thhalv10001567m.g Eutrema salsugineum HOM05D000101 ORTHO05D007021 4.7e-61 238.4 192 63.0
Glyma.07G235000 Glycine max HOM05D000101 ORTHO05D007021 4.7e-61 238.4 166 71.1
Prupe.4G269700 Prunus persica HOM05D000101 ORTHO05D007021 4.7e-61 238.4 190 65.8
Ah.06g194870 Amaranthus hybridus HOM05D000101 ORTHO05D007021 6.1e-61 238.0 167 73.7
HanXRQChr10g0307811 Helianthus annuus HOM05D000101 ORTHO05D007021 6.1e-61 238.0 174 73.6
Nitab4.5_0006265g0050 Nicotiana tabacum HOM05D000101 ORTHO05D007021 8.0e-61 237.7 198 63.1
Phvul.006G016500 Phaseolus vulgaris HOM05D000101 ORTHO05D007021 1.0e-60 237.3 172 71.5
EL10Ac4g10078 Beta vulgaris HOM05D000101 ORTHO05D007021 1.4e-60 236.9 194 66.0
MELO3C014535.2 Cucumis melo HOM05D000101 ORTHO05D007021 1.4e-60 236.9 193 65.3
RcHm_v2.0_Chr2g0110001 Rosa chinensis HOM05D000101 ORTHO05D007021 1.4e-60 236.9 182 66.5
CSS0002182 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D007021 1.8e-60 236.5 173 68.8
DCAR_002122 Daucus carota HOM05D000101 ORTHO05D007021 2.3e-60 236.1 187 66.3
SalBow3G0539 Salvia bowleyana HOM05D000101 ORTHO05D007021 2.3e-60 236.1 184 64.7
Sed0019464 Sechium edule HOM05D000101 ORTHO05D007021 2.3e-60 236.1 193 63.2
Actinidia20391 Actinidia chinensis HOM05D000101 ORTHO05D007021 6.7e-60 234.6 172 68.0
Aa31LG1G25480 Aethionema arabicum HOM05D000101 ORTHO05D007021 6.7e-60 234.6 197 62.4
Nitab4.5_0000271g0210 Nicotiana tabacum HOM05D000101 ORTHO05D007021 8.8e-60 234.2 198 61.6
FvH4_1g18980 Fragaria vesca HOM05D000101 ORTHO05D007021 1.5e-59 233.4 194 63.4
FAN23G0853 Fragaria x ananassa HOM05D002590 ORTHO05D002763 1.5e-59 233.4 182 65.9
Lj2C98T13 Lonicera japonica HOM05D000101 ORTHO05D007021 1.5e-59 233.4 166 72.3
BcaC02g12365 Brassica carinata HOM05D000101 ORTHO05D007021 2.6e-59 232.6 194 61.3
C04p04720 Brassica napus HOM05D000101 ORTHO05D007021 2.6e-59 232.6 194 61.3
BolC4t22102H Brassica oleracea HOM05D000101 ORTHO05D007021 2.6e-59 232.6 194 61.3
Lsat_1_v5_gn_5_88160 Lactuca sativa HOM05D000101 ORTHO05D007021 2.6e-59 232.6 175 71.4
Lj2C4T1 Lonicera japonica HOM05D000101 ORTHO05D007021 2.6e-59 232.6 169 70.4
A05p03970 Brassica napus HOM05D000101 ORTHO05D007021 3.3e-59 232.3 170 68.2
BraA05t19385Z Brassica rapa HOM05D000101 ORTHO05D007021 3.3e-59 232.3 192 62.0
FAN28G0419 Fragaria x ananassa HOM05D000101 ORTHO05D007021 3.3e-59 232.3 182 65.9
unitig_22.g6178 Utricularia gibba HOM05D000101 ORTHO05D007021 4.4e-59 231.9 174 70.1
Carub.0004s2629 Capsella rubella HOM05D000101 ORTHO05D007021 5.7e-59 231.5 192 60.4
ECA234G3554 Erigeron canadensis HOM05D000101 ORTHO05D007021 7.5e-59 231.1 185 68.6
SGA_v2.0_scaffold79G25529 Striga asiatica HOM05D000101 ORTHO05D007021 7.5e-59 231.1 170 68.2
Sp4g25830 Schrenkiella parvula HOM05D000101 ORTHO05D007021 9.7e-59 230.7 192 60.9
Medtr8g036270 Medicago truncatula HOM05D000101 ORTHO05D007021 2.2e-58 229.6 182 64.8
AT2G43760 Arabidopsis thaliana HOM05D000101 ORTHO05D007021 2.8e-58 229.2 192 60.4
Cc01_g07360 Coffea canephora HOM05D000101 ORTHO05D007021 2.8e-58 229.2 195 63.1
THA.LOC104808404 Tarenaya hassleriana HOM05D000101 ORTHO05D007021 2.8e-58 229.2 194 61.9
AL4G42630 Arabidopsis lyrata HOM05D000101 ORTHO05D007021 6.3e-58 228.0 194 59.8
CDE04G1472 Ceratophyllum demersum HOM05D000101 ORTHO05D007021 1.1e-57 227.3 183 63.4
CDE06G1918 Ceratophyllum demersum HOM05D000101 ORTHO05D007021 1.1e-57 227.3 189 63.0
CARHR138950 Cardamine hirsuta HOM05D000101 ORTHO05D007021 1.4e-57 226.9 193 60.6
SGA_v2.0_scaffold13G06395 Striga asiatica HOM05D000101 ORTHO05D007021 7.0e-57 224.6 170 66.5
MBI15_g46843_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D007021 1.3e-55 220.3 165 66.7
BcaC02g07150 Brassica carinata HOM05D000101 ORTHO05D007021 3.4e-51 205.7 192 58.9
ATR0626G326 Amborella trichopoda HOM05D000101 ORTHO05D007021 4.4e-51 205.3 163 65.0
SEGI_13887 Sequoiadendron giganteum HOM05D000101 ORTHO05D007021 2.8e-50 202.6 167 64.1
HPP92_017376 Vanilla planifolia HOM05D000101 ORTHO05D007021 4.8e-50 201.8 168 60.1
SGA_v2.0_scaffold52G19230 Striga asiatica HOM05D000101 ORTHO05D007021 5.4e-49 198.4 122 77.9
Os02g0140300 Oryza sativa ssp. japonica HOM05D000101 ORTHO05D007021 4.2e-46 188.7 175 58.3
Zm00001eb208120 Zea mays HOM05D000101 ORTHO05D007021 4.2e-46 188.7 165 60.6
Gohir.D07G123100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 7.2e-46 188.0 124 76.6
SHI24924 Sapria himalayana HOM05D000101 ORTHO05D007021 9.5e-46 187.6 149 59.7
Gohir.A07G118800 Gossypium hirsutum HOM05D000101 ORTHO05D007021 2.8e-45 186.0 123 75.6
Mapoly0016s0014 Marchantia polymorpha HOM05D000101 ORTHO05D007021 6.1e-45 184.9 144 62.5
SMO119G0082 Selaginella moellendorffii HOM05D000101 ORTHO05D007021 1.8e-44 183.3 154 59.7
AagrBONN_evm.TU.Sc2ySwM_228.724 Anthoceros agrestis HOM05D000101 ORTHO05D007021 1.3e-42 177.2 139 61.2
AUR62006572 Chenopodium quinoa HOM05D000101 ORTHO05D007021 1.7e-42 176.8 198 53.0
Lsat_1_v5_gn_5_88140 Lactuca sativa HOM05D000101 ORTHO05D007021 2.2e-42 176.4 192 56.2
Aqoxy102s002 Aquilegia oxysepala HOM05D000101 ORTHO05D007021 3.3e-38 162.5 110 73.6
Pp3c13_8000 Physcomitrium patens HOM05D000101 ORTHO05D007021 5.6e-38 161.8 154 53.9
Atru.chr5.404 Acer truncatum HOM05D000101 ORTHO05D007021 7.3e-38 161.4 133 67.7
Cre07.g322250 Chlamydomonas reinhardtii HOM05D000101 ORTHO05D007021 2.4e-33 146.4 128 51.6
Sabra16G0167400 Salix brachista HOM05D000101 ORTHO05D007021 2.0e-32 143.3 192 49.0
MCO04G049 Micromonas commoda HOM05D000101 ORTHO05D007021 1.6e-29 133.7 129 51.9
Atru.chr3.2842 Acer truncatum HOM05D000101 ORTHO05D007021 2.8e-29 132.9 84 78.6
Oeu046204.1 Olea europaea HOM05D000101 ORTHO05D007021 4.7e-29 132.1 91 73.6
CBR_g72677 Chara braunii HOM05D000101 ORTHO05D007021 3.1e-28 129.4 144 45.8
C04p70760 Brassica napus HOM05D000101 ORTHO05D007021 1.2e-27 127.5 192 43.8
BolC4t28578H Brassica oleracea HOM05D000101 ORTHO05D007021 1.2e-27 127.5 192 43.8
PRCOL_00006009 Prasinoderma coloniale HOM05D000101 ORTHO05D007021 1.2e-24 117.5 164 42.1
BcaC01g02229 Brassica carinata HOM05D000101 ORTHO05D007021 1.9e-22 110.2 142 45.1
BcaB02g08903 Brassica carinata HOM05D005622 ORTHO05D002854 6.4e-18 95.1 91 52.7
C03p67630 Brassica napus HOM05D000101 ORTHO05D007021 1.4e-17 94.0 142 40.1
BolSC21t60259H Brassica oleracea HOM05D000101 ORTHO05D007021 1.4e-17 94.0 142 40.1
GSVIVG01027252001 Vitis vinifera HOM05D000101 ORTHO05D007021 3.2e-17 92.8 63 73.0
Cfa024344 Carpinus fangiana HOM05D000101 ORTHO05D007021 4.1e-17 92.4 113 40.7
BcaB02g08904 Brassica carinata HOM05D005622 ORTHO05D002854 6.0e-16 88.6 60 73.3
Os02g0517366 Oryza sativa ssp. japonica HOM05D000101 ORTHO05D007021 8.4e-10 68.2 55 60.0


User provided reference genes

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