Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 3.2e-226 788.1 400 100.0
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 2.9e-211 738.4 401 93.3
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 1.4e-128 463.8 405 58.3
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 1.3e-126 457.2 402 59.0
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 2.4e-125 453.0 414 58.2
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 5.4e-117 425.2 392 54.6
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 6.0e-116 421.8 394 54.3
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 8.6e-115 417.9 402 53.7
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 1.1e-112 411.0 392 52.6
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 1.8e-112 410.2 390 54.1
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 5.2e-112 408.7 400 54.5
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 8.9e-112 407.9 400 55.2
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 1.2e-111 407.5 404 52.5
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 8.3e-110 401.4 406 52.0
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 1.9e-109 400.2 393 52.2
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 9.2e-109 397.9 393 51.7
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 6.0e-108 395.2 404 50.0
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 6.0e-108 395.2 400 52.0
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 2.3e-107 393.3 319 59.6
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 3.0e-107 392.9 307 63.2
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 6.6e-107 391.7 324 57.7
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.6e-107 391.7 394 51.5
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 3.3e-106 389.4 324 59.0
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 9.5e-106 387.9 327 58.4
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 9.5e-106 387.9 400 50.0
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 1.6e-105 387.1 404 50.0
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 3.6e-105 386.0 402 52.0
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 6.2e-105 385.2 319 58.9
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 8.1e-105 384.8 395 51.6
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 8.1e-105 384.8 315 59.0
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 1.1e-104 384.4 388 53.1
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 1.8e-104 383.6 360 54.4
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 1.8e-104 383.6 320 57.2
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.8e-104 383.6 389 53.0
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.8e-104 383.6 399 50.1
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 8.9e-104 381.3 391 51.2
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.2e-103 380.9 319 58.3
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 1.2e-103 380.9 395 50.4
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 1.5e-103 380.6 364 54.4
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.5e-103 380.6 317 56.2
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 2.6e-103 379.8 401 49.4
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 3.4e-103 379.4 356 54.8
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 3.4e-103 379.4 410 50.7
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 4.4e-103 379.0 392 51.3
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 4.4e-103 379.0 405 50.4
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 4.4e-103 379.0 389 52.2
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 5.8e-103 378.6 324 57.4
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 7.6e-103 378.3 317 56.5
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 9.9e-103 377.9 392 50.5
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 1.3e-102 377.5 398 49.5
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 1.3e-102 377.5 332 56.0
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 2.2e-102 376.7 320 57.8
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.2e-102 376.7 397 51.6
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 2.9e-102 376.3 400 50.5
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 4.9e-102 375.6 330 57.9
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 6.4e-102 375.2 400 48.5
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 6.4e-102 375.2 356 53.7
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 8.4e-102 374.8 373 51.2
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 1.1e-101 374.4 325 56.0
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 1.9e-101 373.6 389 50.1
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 1.9e-101 373.6 402 51.2
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 1.9e-101 373.6 301 59.5
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 4.1e-101 372.5 393 49.4
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 1.2e-100 370.9 401 49.6
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.2e-100 370.9 401 48.1
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.6e-100 370.5 324 55.9
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 1.6e-100 370.5 402 50.2
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 2.1e-100 370.2 297 59.6
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 2.1e-100 370.2 323 55.4
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 6.0e-100 368.6 400 48.2
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.0e-99 367.9 414 49.8
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 1.0e-99 367.9 388 48.7
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 3.9e-99 365.9 399 48.1
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 6.6e-99 365.2 401 48.4
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 6.6e-99 365.2 401 48.4
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 8.6e-99 364.8 400 47.5
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.9e-98 363.6 317 54.6
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 7.3e-98 361.7 391 47.8
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 9.6e-98 361.3 309 55.7
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 9.6e-98 361.3 401 48.9
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 9.6e-98 361.3 382 49.5
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 2.8e-97 359.8 393 47.3
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 6.2e-97 358.6 403 47.6
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 6.2e-97 358.6 407 46.4
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 1.1e-96 357.8 407 47.7
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 2.4e-96 356.7 456 43.6
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 1.5e-95 354.0 354 51.7
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 2.1e-92 343.6 419 44.6
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 3.9e-91 339.3 310 54.2
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 6.6e-91 338.6 314 53.2
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 8.7e-91 338.2 397 46.3
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 6.2e-89 332.0 315 51.7
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 2.4e-88 330.1 394 44.9
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 2.4e-88 330.1 307 53.4
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 5.3e-88 328.9 333 52.0
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 3.4e-87 326.2 391 44.8
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 7.6e-87 325.1 394 45.2
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.9e-86 323.2 325 52.3
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 3.2e-85 319.7 391 43.7
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 5.4e-85 318.9 391 44.5
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 3.3e-82 309.7 317 48.3
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 1.4e-80 304.3 313 52.7
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 5.3e-80 302.4 412 44.9
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 4.0e-72 276.2 430 39.8
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 1.2e-68 264.6 308 45.1
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 1.5e-66 257.7 231 53.2
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 5.7e-66 255.8 362 41.7
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 1.3e-65 254.6 265 51.3
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 1.1e-64 251.5 294 47.3
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.4e-64 251.1 230 52.2
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 7.6e-63 245.4 281 46.3
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 3.8e-62 243.0 280 45.4
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 8.5e-62 241.9 403 39.0
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 8.2e-57 225.3 354 39.8
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 3.6e-44 183.3 281 40.2
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 3.7e-41 173.3 265 38.1
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 1.8e-35 154.5 116 61.2
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.3e-33 146.0 132 53.8
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 6.3e-33 146.0 181 43.1
Sabra08G0156700 Salix brachista HOM05D005247 ORTHO05D006571 4.1e-32 143.3 124 59.7
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 7.0e-32 142.5 309 28.8
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 7.2e-29 132.5 302 28.5
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 7.5e-26 122.5 150 40.7
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 5.0e-22 109.8 253 29.6
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 5.0e-22 109.8 248 29.4
RcHm_v2.0_Chr4g0421891 Rosa chinensis HOM05D005247 ORTHO05D006571 9.5e-21 105.5 91 60.4
Eucgr.H03759 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.2e-20 105.1 90 58.9
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 2.1e-20 104.4 213 31.0
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 2.1e-20 104.4 76 60.5
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.1e-20 102.8 68 64.7
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 8.8e-19 99.0 296 22.0
Actinidia40231 Actinidia chinensis HOM05D005247 ORTHO05D006571 5.7e-18 96.3 92 53.3
CAN.G640.20 Capsicum annuum HOM05D005247 ORTHO05D006571 1.1e-16 92.0 111 45.0
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 1.3e-14 85.1 207 32.9
CAN.G640.21 Capsicum annuum HOM05D005247 ORTHO05D006571 3.6e-12 77.0 72 51.4
FAN22G1325 Fragaria x ananassa HOM05D005247 ORTHO05D006571 4.4e-10 70.1 58 67.2
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 2.7e-07 60.8 287 23.0
Hund28065 Selenicereus undatus HOM05D000003 ORTHO05D000006 3.5e-07 60.5 148 31.1
Hund28074 Selenicereus undatus HOM05D000003 ORTHO05D000006 3.5e-07 60.5 148 31.1


User provided reference genes

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