Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0834 Papaver somniferum HOM05D007841 ORTHO05D009919 1.9e-30 135.2 70 100.0
PSO732G0215 Papaver somniferum HOM05D007841 ORTHO05D009919 3.1e-28 127.9 67 98.5
CANSAT25G3347 Cannabis sativa HOM05D007841 ORTHO05D009919 3.2e-25 117.9 70 87.1
CANSAT25G3825 Cannabis sativa HOM05D007841 ORTHO05D009919 3.2e-25 117.9 70 87.1
HanXRQChr01g0019691 Helianthus annuus HOM05D007841 ORTHO05D009919 7.2e-25 116.7 63 90.5
Hma1.2p1_2138F.1_g314930 Hydrangea macrophylla HOM05D007841 ORTHO05D009919 7.2e-25 116.7 69 84.1
Phvul.008G138900 Phaseolus vulgaris HOM05D007841 ORTHO05D009919 3.6e-24 114.4 69 82.6
Atru.chr5.91 Acer truncatum HOM05D007841 ORTHO05D009919 4.7e-24 114.0 68 83.8
Prupe.2G120100 Prunus persica HOM05D007841 ORTHO05D009919 4.7e-24 114.0 67 83.6
ECA248G0141 Erigeron canadensis HOM05D007841 ORTHO05D009919 6.1e-24 113.6 63 88.9
Lj1g0014858 Lotus japonicus HOM05D007841 ORTHO05D009919 6.1e-24 113.6 69 84.1
CAN.G756.38 Capsicum annuum HOM05D007841 ORTHO05D009919 7.9e-24 113.2 66 81.8
Oeu034848.1 Olea europaea HOM05D007841 ORTHO05D009919 1.0e-23 112.8 69 81.2
EL10Ac1g00736 Beta vulgaris HOM05D007841 ORTHO05D009919 1.4e-23 112.5 66 83.3
Glyma.08G340600 Glycine max HOM05D007841 ORTHO05D009919 1.4e-23 112.5 69 81.2
Lsat_1_v5_gn_1_83981 Lactuca sativa HOM05D007841 ORTHO05D009919 1.4e-23 112.5 63 87.3
Psat3g152880 Pisum sativum HOM05D007841 ORTHO05D009919 1.4e-23 112.5 69 82.6
Medtr7g050540 Medicago truncatula HOM05D007841 ORTHO05D009919 1.8e-23 112.1 69 82.6
PGR004G1954 Punica granatum HOM05D007841 ORTHO05D009919 1.8e-23 112.1 68 82.4
BcaB03g13636 Brassica carinata HOM05D000300 ORTHO05D000383 3.0e-23 111.3 67 83.6
Duzib138G1421 Durio zibethinus HOM05D007841 ORTHO05D009919 3.0e-23 111.3 63 85.7
Gohir.D12G101400 Gossypium hirsutum HOM05D007841 ORTHO05D009919 3.0e-23 111.3 68 80.9
Gorai.008G110500 Gossypium raimondii HOM05D007841 ORTHO05D009919 3.0e-23 111.3 68 80.9
Solyc01g088770.3 Solanum lycopersicum HOM05D007841 ORTHO05D009919 3.0e-23 111.3 64 81.2
Sopen01g035610 Solanum pennellii HOM05D007841 ORTHO05D009919 3.0e-23 111.3 64 81.2
PGSC0003DMG400001726 Solanum tuberosum HOM05D007841 ORTHO05D009919 3.0e-23 111.3 64 81.2
Actinidia30942 Actinidia chinensis HOM05D007841 ORTHO05D009919 3.9e-23 110.9 68 80.9
THA.LOC104814059 Tarenaya hassleriana HOM05D007841 ORTHO05D009919 3.9e-23 110.9 67 83.6
AT1G02160 Arabidopsis thaliana HOM05D007841 ORTHO05D009919 5.1e-23 110.5 69 81.2
Carub.0001s0004 Capsella rubella HOM05D007841 ORTHO05D009919 5.1e-23 110.5 69 81.2
Cc02_g25410 Coffea canephora HOM05D007841 ORTHO05D009919 5.1e-23 110.5 66 81.8
Thhalv10009237m.g Eutrema salsugineum HOM05D007841 ORTHO05D009919 5.1e-23 110.5 68 82.4
AL1G10060 Arabidopsis lyrata HOM05D007841 ORTHO05D009919 6.7e-23 110.2 69 81.2
CARHR000160 Cardamine hirsuta HOM05D007841 ORTHO05D009919 6.7e-23 110.2 68 82.4
Lalb_Chr03g0040951 Lupinus albus HOM05D007841 ORTHO05D009919 6.7e-23 110.2 69 82.6
RcHm_v2.0_Chr1g0345181 Rosa chinensis HOM05D007841 ORTHO05D009919 6.7e-23 110.2 73 79.5
CiPaw.14G018000 Carya illinoinensis HOM05D007841 ORTHO05D009919 8.8e-23 109.8 69 78.3
Eucgr.D01199 Eucalyptus grandis HOM05D007841 ORTHO05D009919 8.8e-23 109.8 68 82.4
arahy.Tifrunner.gnm1.ann1.K94MSK Arachis hypogaea HOM05D007841 ORTHO05D009919 1.1e-22 109.4 68 80.9
C05p00040 Brassica napus HOM05D007841 ORTHO05D009919 1.1e-22 109.4 67 82.1
BolC5t28791H Brassica oleracea HOM05D007841 ORTHO05D009919 1.1e-22 109.4 67 82.1
CsaV3_3G010620 Cucumis sativus L. HOM05D007841 ORTHO05D009919 1.1e-22 109.4 63 87.3
Potri.014G051850 Populus trichocarpa HOM05D007841 ORTHO05D009919 2.0e-22 108.6 72 77.8
Gohir.A12G098200 Gossypium hirsutum HOM05D007841 ORTHO05D009919 2.6e-22 108.2 68 77.9
Sed0011386 Sechium edule HOM05D007841 ORTHO05D009919 2.6e-22 108.2 67 82.1
ClCG05G003010 Citrullus lanatus HOM05D007841 ORTHO05D009919 3.3e-22 107.8 63 85.7
MD02G1221100 Malus domestica HOM05D007841 ORTHO05D009919 3.3e-22 107.8 68 77.9
Aqoxy7G00835 Aquilegia oxysepala HOM05D007841 ORTHO05D009919 5.7e-22 107.1 64 82.8
COL.COLO4_12370 Corchorus olitorius HOM05D007841 ORTHO05D009919 5.7e-22 107.1 69 76.8
Migut.N01723 Erythranthe guttata HOM05D007841 ORTHO05D009919 7.4e-22 106.7 69 76.8
MD07G1096500 Malus domestica HOM05D007841 ORTHO05D009919 2.2e-21 105.1 68 79.4
Manes.05G057100 Manihot esculenta HOM05D007841 ORTHO05D009919 2.2e-21 105.1 63 81.0
PSO732G0130 Papaver somniferum HOM05D007841 ORTHO05D009919 8.2e-21 103.2 55 98.2
Thecc.01G400700 Theobroma cacao HOM05D007841 ORTHO05D009919 8.2e-21 103.2 69 79.7
unitig_22.g6702 Utricularia gibba HOM05D007841 ORTHO05D009919 1.5e-19 99.0 65 75.4
FvH4_7g09140 Fragaria vesca HOM05D007841 ORTHO05D009919 3.4e-19 97.8 68 75.0
GSVIVG01018320001 Vitis vinifera HOM05D007841 ORTHO05D009919 1.3e-18 95.9 69 72.5
Haze_02887 Corylus avellana HOM05D000061 ORTHO05D000915 3.8e-18 94.4 60 76.7
Os04g0665000 Oryza sativa ssp. japonica HOM05D007841 ORTHO05D009919 8.5e-18 93.2 68 72.1
FAN06G3108 Fragaria x ananassa HOM05D007841 ORTHO05D009919 3.2e-17 91.3 68 73.5
Zm00001eb067220 Zea mays HOM05D007841 ORTHO05D009919 3.2e-17 91.3 70 70.0
Ciclev10023064m.g Citrus clementina HOM05D007841 ORTHO05D009919 4.2e-17 90.9 47 91.5
Nitab4.5_0004425g0050 Nicotiana tabacum HOM05D007841 ORTHO05D009919 9.4e-17 89.7 55 76.4
Nn6g33742 Nelumbo nucifera HOM05D007841 ORTHO05D009919 8.0e-16 86.7 51 80.4
Peaxi162Scf00793g00363 Petunia axillaris HOM05D007841 ORTHO05D009919 8.0e-16 86.7 48 81.2
Hund17114 Selenicereus undatus HOM05D007841 ORTHO05D009919 8.0e-16 86.7 52 78.8
BraA10t42285Z Brassica rapa HOM05D007841 ORTHO05D009919 1.4e-15 85.9 52 78.8
Sp1g00090 Schrenkiella parvula HOM05D007841 ORTHO05D009919 1.8e-15 85.5 52 78.8
arahy.Tifrunner.gnm1.ann1.X5EUJ4 Arachis hypogaea HOM05D007841 ORTHO05D009919 5.2e-15 84.0 53 77.4
SalBow4G0679 Salvia bowleyana HOM05D007841 ORTHO05D009919 5.2e-15 84.0 53 71.7
CSS0006405 Camellia sinensis var. sinensis HOM05D007841 ORTHO05D009919 8.8e-15 83.2 52 76.9
Sc02g0003210 Simmondsia chinensis HOM05D007841 ORTHO05D009919 1.5e-14 82.4 52 76.9
Sabra14G0036700 Salix brachista HOM05D007841 ORTHO05D009919 4.8e-13 77.4 41 92.7
Pp3c22_2080 Physcomitrium patens HOM05D007841 ORTHO05D009919 1.1e-12 76.3 68 58.8
Aa31LG1G11570 Aethionema arabicum HOM05D007841 ORTHO05D009919 1.4e-12 75.9 48 79.2
AUR62013771 Chenopodium quinoa HOM05D007841 ORTHO05D009919 1.4e-12 75.9 50 72.0
AUR62023385 Chenopodium quinoa HOM05D007841 ORTHO05D009919 1.4e-12 75.9 50 72.0
FAN01G1055 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.8e-12 75.5 52 73.1
FAN03G2201 Fragaria x ananassa HOM05D007841 ORTHO05D009919 1.8e-12 75.5 52 73.1
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 9.1e-12 73.2 45 82.2
AagrBONN_evm.TU.Sc2ySwM_228.3132 Anthoceros agrestis HOM05D007841 ORTHO05D009919 2.2e-10 68.6 52 65.4
Mapoly0181s0011 Marchantia polymorpha HOM05D007841 ORTHO05D009919 3.8e-10 67.8 59 54.2
Actinidia05779 Actinidia chinensis HOM05D007841 ORTHO05D009919 3.2e-09 64.7 33 84.8
CAN.G756.35 Capsicum annuum HOM05D007841 ORTHO05D009919 5.5e-09 63.9 36 86.1
CANSAT54G2157 Cannabis sativa HOM05D007841 ORTHO05D113685 9.7e-06 53.1 30 83.3


User provided reference genes

Program Settings