Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 0.0e+00 1795.4 916 100.0
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 0.0e+00 1617.1 921 91.2
TAR381G1042 Trochodendron aralioides HOM05D006144 ORTHO05D006357 7.6e-183 645.2 717 53.6
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 2.5e-170 603.6 729 50.3
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 1.8e-163 580.9 705 48.5
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 6.7e-163 578.9 732 48.0
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 1.7e-158 564.3 730 46.4
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 6.5e-158 562.4 718 47.5
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 1.1e-157 561.6 716 46.2
GSVIVG01002633001 Vitis vinifera HOM05D006144 ORTHO05D006357 1.3e-155 554.7 721 47.3
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 2.2e-153 547.4 710 46.1
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 4.8e-153 546.2 729 45.7
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 6.3e-153 545.8 692 46.4
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 1.8e-152 544.3 694 47.6
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 1.8e-152 544.3 702 46.6
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 5.3e-152 542.7 715 47.3
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 2.0e-151 540.8 721 46.9
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 3.4e-151 540.0 730 47.1
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 1.0e-150 538.5 709 46.3
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 1.7e-150 537.7 720 45.4
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 1.4e-149 534.6 701 46.2
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 1.6e-148 531.2 700 45.3
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 2.7e-148 530.4 698 45.1
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 7.9e-148 528.9 715 45.0
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 9.7e-146 521.9 722 45.3
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 3.7e-145 520.0 733 44.1
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 4.8e-145 519.6 703 44.5
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 4.5e-143 513.1 712 44.2
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.0e-142 511.9 733 43.0
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 6.5e-142 509.2 726 43.0
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 4.2e-141 506.5 727 44.3
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 5.5e-141 506.1 720 43.2
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 1.2e-140 505.0 727 43.6
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 3.9e-139 500.0 713 44.3
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 5.1e-139 499.6 720 43.5
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 1.7e-137 494.6 726 42.8
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 7.7e-135 485.7 705 42.4
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 1.0e-134 485.3 723 42.6
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 2.2e-134 484.2 703 44.5
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 8.5e-134 482.3 702 42.7
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 4.2e-133 479.9 710 43.1
Cpa.g.sc55.182 Carica papaya HOM05D006144 ORTHO05D006357 5.5e-133 479.6 702 41.9
Lj4C140T7 Lonicera japonica HOM05D006144 ORTHO05D006357 5.5e-133 479.6 695 43.6
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 5.7e-130 469.5 662 43.4
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 5.9e-127 459.5 709 44.0
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 1.5e-125 454.9 708 42.9
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 2.5e-125 454.1 722 42.8
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 4.2e-125 453.4 707 42.3
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 4.7e-124 449.9 725 41.5
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 4.7e-124 449.9 710 39.6
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 4.7e-124 449.9 719 42.1
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 4.7e-124 449.9 611 46.3
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 6.1e-124 449.5 710 39.6
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 1.4e-123 448.4 721 41.7
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 6.8e-123 446.0 705 40.1
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 3.7e-121 440.3 705 43.4
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 7.0e-120 436.0 694 41.2
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 9.1e-120 435.6 727 42.1
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 2.7e-119 434.1 709 38.6
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 3.5e-119 433.7 700 40.1
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 1.9e-117 427.9 696 39.8
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 5.5e-117 426.4 717 38.4
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 3.6e-116 423.7 714 40.2
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 6.8e-115 419.5 738 38.8
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 1.5e-114 418.3 709 39.6
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 1.5e-114 418.3 707 39.3
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 4.4e-114 416.8 738 38.9
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 7.5e-114 416.0 715 37.9
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 2.2e-113 414.5 705 38.6
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 1.1e-112 412.1 723 38.3
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 4.1e-112 410.2 708 40.5
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 5.9e-111 406.4 704 38.5
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 1.6e-108 398.3 700 38.3
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 3.0e-107 394.0 707 39.9
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 5.2e-107 393.3 701 39.8
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 1.7e-105 388.3 697 39.5
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 2.9e-105 387.5 719 38.8
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 6.4e-105 386.3 701 38.2
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 1.1e-104 385.6 699 39.1
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 7.0e-104 382.9 715 38.2
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 7.0e-104 382.9 700 37.6
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 5.0e-102 376.7 716 38.8
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 5.0e-102 376.7 716 38.8
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 1.1e-101 375.6 699 38.9
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 1.2e-98 365.5 709 37.0
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 2.2e-97 361.3 356 52.0
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 3.0e-94 350.9 670 38.8
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 5.6e-93 346.7 698 37.0
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 2.6e-90 337.8 709 36.4
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 8.3e-89 332.8 713 34.9
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 1.1e-88 332.4 695 36.7
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 7.1e-88 329.7 760 36.6
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 6.6e-86 323.2 658 35.1
TPR.G640 Trifolium pratense HOM05D006144 ORTHO05D006357 6.6e-86 323.2 319 52.0
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 1.5e-82 312.0 691 34.7
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 4.4e-82 310.5 588 37.2
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 1.7e-81 308.5 533 39.0
unitig_736.g22372 Utricularia gibba HOM05D006144 ORTHO05D006357 1.7e-81 308.5 684 35.7
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 1.9e-80 305.1 588 37.6
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 9.2e-80 302.8 347 45.8
Hma1.2p1_1415F.1_g282000 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 1.5e-69 268.9 675 33.5
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 3.3e-69 267.7 323 45.2
SEGI_17223 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 8.1e-68 263.1 332 42.8
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 4.1e-43 181.0 370 31.6
AUR62039591 Chenopodium quinoa HOM05D006144 ORTHO05D006357 2.6e-42 178.3 332 35.8
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 1.6e-39 169.1 346 32.7
AUR62013383 Chenopodium quinoa HOM05D006144 ORTHO05D006017 5.7e-37 160.6 264 39.0
Aa31LG1G15380 Aethionema arabicum HOM05D012861 ORTHO05D006357 1.0e-30 139.8 581 27.2
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 3.0e-30 138.3 320 28.4
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 2.6e-29 135.2 157 45.2
AT5G66820 Arabidopsis thaliana HOM05D012861 ORTHO05D006357 2.2e-25 122.1 577 28.8
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 5.3e-19 100.9 236 31.8
Dinv29968 Davidia involucrata HOM05D000370 ORTHO05D001366 3.2e-16 91.7 120 44.2
Sp2g29830 Schrenkiella parvula HOM05D012861 ORTHO05D006357 5.5e-16 90.9 251 32.3
AL8G44580 Arabidopsis lyrata HOM05D012861 ORTHO05D006357 6.1e-15 87.4 190 34.7
Sabra05G0109100 Salix brachista HOM05D006144 ORTHO05D006357 6.1e-15 87.4 183 32.8
Carub.0008s2766 Capsella rubella HOM05D012861 ORTHO05D006357 2.3e-14 85.5 572 26.4
AagrBONN_evm.TU.Sc2ySwM_228.442 Anthoceros agrestis HOM05D006144 ORTHO05D006357 2.0e-13 82.4 307 23.5
CARHR280840 Cardamine hirsuta HOM05D012861 ORTHO05D006357 7.5e-13 80.5 190 31.6
Thhalv10004001m.g Eutrema salsugineum HOM05D012861 ORTHO05D006357 7.5e-13 80.5 247 27.9
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 9.1e-11 73.6 290 23.8
BcaC06g34756 Brassica carinata HOM05D012861 ORTHO05D006357 1.2e-10 73.2 398 28.4
BcaB02g09983 Brassica carinata HOM05D012861 ORTHO05D006357 2.0e-10 72.4 211 32.7
BolC7t43021H Brassica oleracea HOM05D012861 ORTHO05D006357 2.7e-10 72.0 398 28.6
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 3.5e-10 71.6 190 30.5
C07p24920 Brassica napus HOM05D012861 ORTHO05D006357 3.8e-09 68.2 384 28.4
SEGI_01818 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 1.5e-08 66.2 90 38.9
A07p17060 Brassica napus HOM05D012861 ORTHO05D006357 5.5e-08 64.3 389 28.0
BraA07t29433Z Brassica rapa HOM05D012861 ORTHO05D006357 5.5e-08 64.3 389 28.0


User provided reference genes

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