Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 1.3e-66 256.1 122 100.0
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 1.3e-66 256.1 122 100.0
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 5.5e-65 250.8 122 97.5
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 5.7e-62 240.7 122 93.4
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 5.2e-55 217.6 119 84.0
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 6.8e-55 217.2 119 85.7
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 8.9e-55 216.9 119 84.9
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 8.9e-55 216.9 119 84.9
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 8.9e-55 216.9 119 84.9
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.5e-54 216.1 119 84.9
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 1.5e-54 216.1 122 83.6
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 2.6e-54 215.3 119 82.4
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.6e-54 215.3 119 84.0
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.4e-54 214.9 119 84.0
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 4.4e-54 214.5 116 86.2
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 4.4e-54 214.5 119 82.4
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 6.4e-53 210.7 120 81.7
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 8.3e-53 210.3 119 81.5
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 8.3e-53 210.3 119 81.5
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 8.3e-53 210.3 119 80.7
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 8.3e-53 210.3 118 80.5
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 8.3e-53 210.3 119 82.4
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 1.1e-52 209.9 119 79.8
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.4e-52 209.5 119 79.8
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 1.9e-52 209.1 119 79.8
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 4.1e-52 208.0 118 80.5
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 5.4e-52 207.6 119 80.7
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 5.4e-52 207.6 119 79.8
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 5.4e-52 207.6 114 85.1
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 9.2e-52 206.8 119 80.7
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 9.2e-52 206.8 119 79.8
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 9.2e-52 206.8 119 79.8
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 9.2e-52 206.8 119 81.5
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 9.2e-52 206.8 114 84.2
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 1.2e-51 206.5 119 79.0
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 1.2e-51 206.5 118 81.4
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 1.6e-51 206.1 119 79.8
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 1.6e-51 206.1 119 79.8
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 1.6e-51 206.1 119 79.8
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 1.6e-51 206.1 119 79.8
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 2.7e-51 205.3 118 82.2
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 3.5e-51 204.9 119 79.0
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 3.5e-51 204.9 119 81.5
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 4.6e-51 204.5 118 79.7
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 4.6e-51 204.5 118 82.2
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 6.0e-51 204.1 119 78.2
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 6.0e-51 204.1 118 82.2
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 7.8e-51 203.8 119 78.2
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 7.8e-51 203.8 119 78.2
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 1.0e-50 203.4 118 79.7
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.3e-50 203.0 119 77.3
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 1.3e-50 203.0 118 81.4
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 1.7e-50 202.6 119 78.2
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 1.7e-50 202.6 118 81.4
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 1.7e-50 202.6 114 82.5
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 2.3e-50 202.2 118 78.0
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 2.3e-50 202.2 116 82.8
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 2.3e-50 202.2 119 79.0
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 3.0e-50 201.8 119 77.3
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 3.0e-50 201.8 118 79.7
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 3.0e-50 201.8 119 77.3
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 3.9e-50 201.4 118 78.8
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 3.9e-50 201.4 118 78.8
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 5.0e-50 201.1 119 79.0
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 5.0e-50 201.1 116 81.0
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 5.0e-50 201.1 119 77.3
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 5.0e-50 201.1 119 78.2
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 6.6e-50 200.7 118 78.0
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 6.6e-50 200.7 119 80.7
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 6.6e-50 200.7 119 80.7
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 6.6e-50 200.7 119 79.8
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 6.6e-50 200.7 120 76.7
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 8.6e-50 200.3 119 77.3
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 8.6e-50 200.3 119 77.3
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 8.6e-50 200.3 119 77.3
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 8.6e-50 200.3 119 77.3
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 8.6e-50 200.3 119 77.3
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 8.6e-50 200.3 119 76.5
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 8.6e-50 200.3 143 70.6
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 1.1e-49 199.9 119 77.3
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 1.1e-49 199.9 119 77.3
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 1.1e-49 199.9 119 77.3
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 1.1e-49 199.9 119 77.3
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 1.1e-49 199.9 119 77.3
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 1.1e-49 199.9 119 77.3
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 1.5e-49 199.5 119 77.3
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 1.5e-49 199.5 119 77.3
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 1.5e-49 199.5 119 79.8
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 1.5e-49 199.5 114 80.7
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 1.9e-49 199.1 119 79.8
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 1.9e-49 199.1 119 77.3
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 1.9e-49 199.1 114 81.6
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 1.9e-49 199.1 114 81.6
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 4.3e-49 198.0 118 79.7
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 4.3e-49 198.0 118 78.8
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 4.3e-49 198.0 118 78.8
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 5.6e-49 197.6 119 76.5
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 7.3e-49 197.2 119 75.6
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 9.5e-49 196.8 119 76.5
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 1.6e-48 196.1 119 74.8
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 2.1e-48 195.7 116 79.3
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 2.8e-48 195.3 119 75.6
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 2.8e-48 195.3 114 80.7
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 2.8e-48 195.3 118 75.4
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 3.6e-48 194.9 119 76.5
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 4.7e-48 194.5 118 74.6
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 6.2e-48 194.1 119 77.3
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 6.2e-48 194.1 119 75.6
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 1.1e-47 193.4 114 76.3
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 1.1e-47 193.4 111 81.1
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 1.8e-47 192.6 118 77.1
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 2.3e-47 192.2 111 79.3
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 3.1e-47 191.8 116 76.7
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 6.8e-47 190.7 110 80.0
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 8.9e-47 190.3 119 73.1
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.5e-46 189.5 110 81.8
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 2.6e-46 188.7 119 73.9
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 2.6e-46 188.7 110 80.9
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 6.0e-43 177.6 110 78.2
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 1.3e-42 176.4 112 77.7
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 2.3e-42 175.6 115 73.0
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 3.0e-42 175.3 110 75.5
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 1.2e-40 169.9 119 69.7
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 3.6e-40 168.3 107 77.6
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 5.2e-39 164.5 118 63.6
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 1.2e-38 163.3 130 61.5
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 2.6e-38 162.2 91 83.5
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 3.4e-38 161.8 211 43.6
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 5.8e-38 161.0 94 79.8
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 2.2e-37 159.1 110 72.7
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 2.2e-37 159.1 110 72.7
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 3.7e-37 158.3 123 65.0
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 1.9e-36 156.0 110 71.8
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.9e-36 156.0 90 81.1
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 2.4e-36 155.6 91 80.2
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 2.4e-36 155.6 90 82.2
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 4.1e-36 154.8 89 82.0
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 5.4e-36 154.5 90 81.1
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 1.2e-35 153.3 119 58.8
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 1.2e-35 153.3 168 50.6
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 1.6e-35 152.9 133 55.6
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 2.1e-35 152.5 90 75.6
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.0e-35 151.0 90 80.0
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.3e-34 149.8 90 77.8
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 1.7e-34 149.4 91 73.6
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 5.1e-34 147.9 118 61.9
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 3.3e-33 145.2 135 59.3
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 6.2e-32 141.0 86 74.4
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 8.1e-32 140.6 85 77.6
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 2.4e-31 139.0 89 74.2
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 1.5e-30 136.3 89 71.9
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 7.6e-30 134.0 89 70.8
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.9e-29 131.3 77 81.8
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 1.4e-28 129.8 82 70.7
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 1.4e-28 129.8 95 64.2
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 1.2e-27 126.7 118 49.2
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 4.6e-27 124.8 95 66.3
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 7.3e-25 117.5 119 52.9
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 1.8e-23 112.8 111 47.7
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 4.0e-23 111.7 62 80.6
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 4.0e-23 111.7 62 80.6
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 6.9e-23 110.9 62 80.6
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 9.0e-23 110.5 62 80.6
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 7.1e-20 100.9 90 58.9
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.7e-18 96.3 60 75.0
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 1.7e-18 96.3 81 63.0
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 8.7e-18 94.0 60 73.3
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 2.5e-17 92.4 56 71.4
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 6.2e-16 87.8 117 37.6
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.9e-15 84.3 57 70.2
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 2.1e-08 62.8 44 68.2
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 1.1e-07 60.5 41 68.3


User provided reference genes

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