Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0724 Papaver somniferum HOM05D005437 ORTHO05D006699 1.1e-107 393.3 197 100.0
PSO675G2460 Papaver somniferum HOM05D005437 ORTHO05D006699 1.1e-102 376.7 194 96.4
TAR626G0611 Trochodendron aralioides HOM05D005437 ORTHO05D006699 5.2e-73 278.1 194 69.6
CiPaw.11G065200 Carya illinoinensis HOM05D005437 ORTHO05D006699 2.0e-72 276.2 194 69.1
Duzib213G0844 Durio zibethinus HOM05D005437 ORTHO05D006699 1.7e-71 273.1 194 69.1
Nn7g37998 Nelumbo nucifera HOM05D005437 ORTHO05D006699 1.7e-71 273.1 194 68.0
COL.COLO4_36739 Corchorus olitorius HOM05D005437 ORTHO05D006699 2.9e-71 272.3 194 68.6
Sabra07G0053300 Salix brachista HOM05D005437 ORTHO05D006699 2.9e-71 272.3 194 69.6
QL04p076801 Quercus lobata HOM05D005437 ORTHO05D006699 4.9e-71 271.6 194 68.0
Potri.007G066400 Populus trichocarpa HOM05D005437 ORTHO05D006699 6.4e-71 271.2 194 68.6
Thecc.07G149800 Theobroma cacao HOM05D005437 ORTHO05D006699 6.4e-71 271.2 194 68.6
Prupe.4G138400 Prunus persica HOM05D005437 ORTHO05D006699 3.2e-70 268.9 194 70.1
Dinv19612 Davidia involucrata HOM05D005437 ORTHO05D006699 4.2e-70 268.5 194 67.0
AT1G16540 Arabidopsis thaliana HOM05D005437 ORTHO05D006699 7.8e-69 264.2 195 66.7
Gohir.D01G027500 Gossypium hirsutum HOM05D005437 ORTHO05D006699 1.0e-68 263.8 194 67.5
AL1G28710 Arabidopsis lyrata HOM05D005437 ORTHO05D006699 1.3e-68 263.5 195 67.2
Atru.chr1.169 Acer truncatum HOM05D005437 ORTHO05D006699 2.3e-68 262.7 194 64.4
Atru.chr1.178 Acer truncatum HOM05D005437 ORTHO05D006699 2.3e-68 262.7 194 64.4
GSVIVG01020355001 Vitis vinifera HOM05D005437 ORTHO05D006699 3.0e-68 262.3 194 66.5
Aqoxy1G01551_Aqoxy1G01552 Aquilegia oxysepala HOM05D005437 ORTHO05D006699 3.9e-68 261.9 196 66.3
Gohir.A01G039700 Gossypium hirsutum HOM05D005437 ORTHO05D006699 5.1e-68 261.5 194 66.5
Gorai.002G036800 Gossypium raimondii HOM05D005437 ORTHO05D006699 8.7e-68 260.8 194 67.0
CSS0042223 Camellia sinensis var. sinensis HOM05D005437 ORTHO05D006699 1.5e-67 260.0 194 66.0
Ciclev10004324m.g Citrus clementina HOM05D005437 ORTHO05D006699 1.9e-67 259.6 194 66.0
TWI39G0192 Tripterygium wilfordii HOM05D005437 ORTHO05D006699 7.3e-67 257.7 199 65.3
Sp1g14710 Schrenkiella parvula HOM05D005437 ORTHO05D006699 2.8e-66 255.8 195 64.1
Carub.0001s1630 Capsella rubella HOM05D005437 ORTHO05D006699 3.6e-66 255.4 195 64.6
Thhalv10006808m.g Eutrema salsugineum HOM05D005437 ORTHO05D006699 6.2e-66 254.6 195 64.6
CANSAT80G2640 Cannabis sativa HOM05D005437 ORTHO05D006699 8.1e-66 254.2 194 63.9
vmacro11674 Vaccinium macrocarpon HOM05D005437 ORTHO05D006699 2.4e-65 252.7 194 62.4
RcHm_v2.0_Chr5g0026221 Rosa chinensis HOM05D005437 ORTHO05D006699 3.1e-65 252.3 194 63.4
A06p12540 Brassica napus HOM05D005437 ORTHO05D006699 1.2e-64 250.4 195 62.6
BraA06t24417Z Brassica rapa HOM05D005437 ORTHO05D006699 1.2e-64 250.4 195 62.6
FAN25G2633 Fragaria x ananassa HOM05D005437 ORTHO05D006699 3.4e-64 248.8 194 61.9
Hma1.2p1_0637F.1_g193450 Hydrangea macrophylla HOM05D005437 ORTHO05D006699 3.4e-64 248.8 195 64.6
Manes.06G173000 Manihot esculenta HOM05D005437 ORTHO05D006699 3.4e-64 248.8 194 64.4
C05p14850 Brassica napus HOM05D005437 ORTHO05D006699 9.9e-64 247.3 195 62.1
FvH4_3g15600 Fragaria vesca HOM05D005437 ORTHO05D006699 9.9e-64 247.3 194 61.9
FAN11G3430 Fragaria x ananassa HOM05D005437 ORTHO05D006699 9.9e-64 247.3 194 61.9
BolC5t30200H Brassica oleracea HOM05D005437 ORTHO05D006699 1.7e-63 246.5 195 62.1
FAN16G0636 Fragaria x ananassa HOM05D005437 ORTHO05D006699 1.7e-63 246.5 194 61.3
FAN21G1213 Fragaria x ananassa HOM05D005437 ORTHO05D006699 1.7e-63 246.5 194 61.3
Actinidia12783 Actinidia chinensis HOM05D005437 ORTHO05D006699 3.8e-63 245.4 194 62.4
Eucgr.F01464 Eucalyptus grandis HOM05D005437 ORTHO05D006699 1.1e-62 243.8 194 63.4
Medtr4g030930 Medicago truncatula HOM05D005437 ORTHO05D006699 1.4e-62 243.4 196 62.2
DCAR_009644 Daucus carota HOM05D005437 ORTHO05D006699 1.9e-62 243.0 194 61.3
Psat7g228480 Pisum sativum HOM05D005437 ORTHO05D006699 1.9e-62 243.0 196 63.3
THA.LOC104812356 Tarenaya hassleriana HOM05D005437 ORTHO05D006699 2.1e-61 239.6 195 63.1
Ca_19805_v3 Cicer arietinum L. HOM05D005437 ORTHO05D006699 2.7e-61 239.2 194 61.9
MELO3C019659.2 Cucumis melo HOM05D005437 ORTHO05D006699 2.7e-61 239.2 194 63.4
Aa31LG7G1090 Aethionema arabicum HOM05D005437 ORTHO05D006699 3.5e-61 238.8 200 59.5
CsaV3_6G013680 Cucumis sativus L. HOM05D005437 ORTHO05D006699 6.0e-61 238.0 194 62.9
HanXRQChr11g0335011 Helianthus annuus HOM05D005437 ORTHO05D006699 1.0e-60 237.3 194 60.3
Sopen07g034660 Solanum pennellii HOM05D005437 ORTHO05D006699 1.0e-60 237.3 194 61.3
TPR.G34170 Trifolium pratense HOM05D005437 ORTHO05D006699 1.3e-60 236.9 194 60.8
MD05G1221200 Malus domestica HOM05D005437 ORTHO05D006699 1.7e-60 236.5 221 57.9
Phvul.011G216100 Phaseolus vulgaris HOM05D005437 ORTHO05D006699 1.7e-60 236.5 197 62.4
Solyc07g066480.3 Solanum lycopersicum HOM05D005437 ORTHO05D006699 5.1e-60 235.0 194 60.8
AUR62011473 Chenopodium quinoa HOM05D005437 ORTHO05D006699 1.1e-59 233.8 195 59.5
Glyma.09G002300 Glycine max HOM05D005437 ORTHO05D006699 1.1e-59 233.8 197 61.9
arahy.Tifrunner.gnm1.ann1.K3W397 Arachis hypogaea HOM05D005437 ORTHO05D006699 1.5e-59 233.4 195 62.6
Cc05_g16200 Coffea canephora HOM05D005437 ORTHO05D006699 1.9e-59 233.0 194 60.8
CAN.G943.42 Capsicum annuum HOM05D005437 ORTHO05D006699 2.5e-59 232.6 194 61.3
Oeu036617.1 Olea europaea HOM05D005437 ORTHO05D006699 2.5e-59 232.6 194 59.8
ECA236G0150 Erigeron canadensis HOM05D005437 ORTHO05D006699 5.6e-59 231.5 194 58.2
PGR102G1747 Punica granatum HOM05D005437 ORTHO05D006699 9.6e-59 230.7 194 60.8
Lj3g0019331 Lotus japonicus HOM05D005437 ORTHO05D006699 2.8e-58 229.2 197 61.4
CARHR017020 Cardamine hirsuta HOM05D005437 ORTHO05D006699 4.8e-58 228.4 178 64.6
Sc20g0003070 Simmondsia chinensis HOM05D005437 ORTHO05D006699 4.8e-58 228.4 194 58.8
Lalb_Chr01g0008201 Lupinus albus HOM05D005437 ORTHO05D006699 8.1e-58 227.6 197 59.9
Os06g0670000 Oryza sativa ssp. japonica HOM05D005437 ORTHO05D006699 8.1e-58 227.6 200 60.0
ATR0763G170 Amborella trichopoda HOM05D005437 ORTHO05D006699 1.1e-57 227.3 194 59.3
VMungo1127G0204 Vigna mungo HOM05D005437 ORTHO05D006699 1.1e-57 227.3 195 62.1
Zm00001eb389990 Zea mays HOM05D005437 ORTHO05D006699 1.4e-57 226.9 197 59.4
EL10Ac9g21866 Beta vulgaris HOM05D005437 ORTHO05D006699 3.1e-57 225.7 190 58.9
Zm00001eb274240 Zea mays HOM05D005437 ORTHO05D006699 9.0e-57 224.2 197 59.4
Peaxi162Scf00452g00721 Petunia axillaris HOM05D005437 ORTHO05D006699 1.5e-56 223.4 202 58.9
HPP92_026356 Vanilla planifolia HOM05D005437 ORTHO05D006699 9.9e-56 220.7 195 56.9
Rhsim06G0239800 Rhododendron simsii HOM05D005437 ORTHO05D006699 1.7e-55 219.9 243 48.6
AUR62016581 Chenopodium quinoa HOM05D005437 ORTHO05D006699 1.9e-54 216.5 186 58.1
Migut.M01548 Erythranthe guttata HOM05D005437 ORTHO05D006699 1.9e-54 216.5 195 56.9
Lsat_1_v5_gn_7_111601 Lactuca sativa HOM05D005437 ORTHO05D006699 4.2e-54 215.3 194 57.7
Sed0015468 Sechium edule HOM05D005437 ORTHO05D006699 1.0e-52 210.7 177 61.0
arahy.Tifrunner.gnm1.ann1.49XUJ3 Arachis hypogaea HOM05D005437 ORTHO05D006699 6.7e-52 208.0 178 61.8
Lj8A189G30 Lonicera japonica HOM05D005437 ORTHO05D006699 1.1e-51 207.2 166 62.0
SEGI_23870 Sequoiadendron giganteum HOM05D005437 ORTHO05D006699 1.6e-50 203.4 200 53.0
Duzib268G1426 Durio zibethinus HOM05D005437 ORTHO05D006699 3.7e-50 202.2 138 71.0
Nitab4.5_0001080g0010 Nicotiana tabacum HOM05D005437 ORTHO05D006699 2.6e-48 196.1 264 45.1
Nitab4.5_0002321g0070 Nicotiana tabacum HOM05D005437 ORTHO05D006699 5.8e-48 194.9 259 45.9
SalBow8G5394 Salvia bowleyana HOM05D005437 ORTHO05D006699 4.6e-45 185.3 177 54.2
AagrBONN_evm.TU.Sc2ySwM_344.1621 Anthoceros agrestis HOM05D005437 ORTHO05D006699 1.8e-44 183.3 175 54.9
Pp3c5_23340 Physcomitrium patens HOM05D005437 ORTHO05D006699 6.7e-44 181.4 194 50.0
Mapoly0055s0057 Marchantia polymorpha HOM05D005437 ORTHO05D006699 2.8e-42 176.0 199 48.7
SGA_v2.0_scaffold186G40210 Striga asiatica HOM05D005437 ORTHO05D006699 1.2e-40 170.6 160 55.0
SMO144G0105 Selaginella moellendorffii HOM05D005437 ORTHO05D006699 1.3e-39 167.2 194 48.5
unitig_748.g7633 Utricularia gibba HOM05D005437 ORTHO05D006699 4.2e-38 162.2 176 49.4
Ah.01g020370 Amaranthus hybridus HOM05D005437 ORTHO05D006699 1.3e-36 157.1 216 43.1
AL6G51080 Arabidopsis lyrata HOM05D005437 ORTHO05D006699 1.2e-32 144.1 123 57.7
Cre02.g142351 Chlamydomonas reinhardtii HOM05D005437 ORTHO05D006699 1.8e-28 130.2 198 37.9
CDE02G3212 Ceratophyllum demersum HOM05D005437 ORTHO05D006699 2.2e-23 113.2 130 50.8
CBR_g6363 Chara braunii HOM05D005437 ORTHO05D006699 1.2e-21 107.5 77 64.9
MCO10G344 Micromonas commoda HOM05D005437 ORTHO05D006699 1.2e-16 90.9 207 32.4
Cre03.g152000 Chlamydomonas reinhardtii HOM05D005437 ORTHO05D006699 6.7e-12 75.1 101 41.6
PGSC0003DMG400022125 Solanum tuberosum HOM05D005437 ORTHO05D006699 2.6e-11 73.2 48 66.7
SalBow1G2829 Salvia bowleyana HOM05D005437 ORTHO05D006699 1.8e-09 67.0 48 62.5
SalBow2G0599 Salvia bowleyana HOM05D005437 ORTHO05D006699 1.8e-09 67.0 48 62.5
Cfa026809 Carpinus fangiana HOM05D005437 ORTHO05D006699 2.4e-09 66.6 130 33.8
SalBow8G2468 Salvia bowleyana HOM05D005437 ORTHO05D006699 4.1e-09 65.9 48 60.4
Pp3c16_23490 Physcomitrium patens HOM05D001123 ORTHO05D000966 1.0e-07 61.2 160 25.0
PRCOL_00000624 Prasinoderma coloniale HOM05D005437 ORTHO05D006699 5.0e-07 58.9 114 34.2
SalBow1G8353 Salvia bowleyana HOM05D000997 ORTHO05D350362 5.5e-06 55.5 40 62.5
SalBow1G8669 Salvia bowleyana HOM05D000997 ORTHO05D000828 5.5e-06 55.5 40 62.5
Mapoly0046s0017 Marchantia polymorpha HOM05D001123 ORTHO05D000966 7.2e-06 55.1 80 32.5


User provided reference genes

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