Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 1.1e-286 989.2 476 100.0
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 1.3e-279 965.7 480 96.9
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 8.5e-186 654.1 475 68.6
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.1e-185 653.7 475 68.4
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 3.6e-184 648.7 471 67.1
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 8.8e-183 644.0 481 65.7
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 4.8e-181 638.3 472 67.6
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 2.2e-178 629.4 482 64.9
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.7e-176 621.7 482 64.3
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 1.8e-175 619.8 471 65.0
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 4.8e-173 611.7 466 64.2
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 4.0e-167 592.0 473 63.2
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 5.2e-167 591.7 475 62.9
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 3.4e-166 589.0 477 60.0
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 1.8e-164 583.2 477 59.7
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 9.1e-164 580.9 477 59.7
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.6e-163 580.1 472 62.1
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 7.2e-161 571.2 477 61.0
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 3.6e-160 568.9 477 60.2
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 7.5e-158 561.2 485 60.4
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 2.8e-157 559.3 480 59.4
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 9.2e-156 554.3 467 59.1
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.3e-154 549.7 470 58.3
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 7.3e-153 544.7 468 57.3
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 6.8e-151 538.1 463 57.9
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 5.7e-150 535.0 478 57.7
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 1.4e-148 530.4 465 55.5
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 5.4e-148 528.5 465 55.7
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 7.0e-148 528.1 466 54.9
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 2.3e-146 523.1 472 56.8
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 6.6e-146 521.5 469 56.5
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 5.6e-145 518.5 482 55.2
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 1.2e-144 517.3 468 56.4
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 4.7e-144 515.4 485 55.9
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 8.0e-144 514.6 462 55.0
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 8.0e-144 514.6 467 56.3
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 5.2e-143 511.9 467 55.9
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 2.6e-142 509.6 487 55.9
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 7.5e-142 508.1 488 55.3
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 9.8e-142 507.7 462 55.2
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 1.3e-141 507.3 469 54.2
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 1.7e-141 506.9 464 55.4
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 8.3e-141 504.6 479 54.5
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.4e-140 503.1 470 55.3
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 4.1e-140 502.3 480 55.6
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 2.7e-139 499.6 487 55.2
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 4.6e-139 498.8 465 54.6
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 1.0e-138 497.7 483 55.7
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 1.0e-138 497.7 467 55.0
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 5.0e-138 495.4 466 54.3
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 6.6e-138 495.0 466 54.1
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 8.6e-138 494.6 463 53.1
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.5e-137 493.8 473 54.3
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 1.9e-137 493.4 470 54.7
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 2.5e-137 493.0 470 54.5
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 4.3e-137 492.3 479 54.7
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 4.0e-135 485.7 465 53.3
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 1.7e-133 480.3 466 54.1
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 2.9e-133 479.6 474 54.4
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 6.4e-133 478.4 467 52.0
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.1e-132 477.6 473 53.3
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 2.4e-132 476.5 480 51.5
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 3.2e-132 476.1 481 53.2
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 4.6e-131 472.2 472 52.1
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 3.0e-130 469.5 463 52.9
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 5.1e-130 468.8 462 54.5
TAR625G0711 Trochodendron aralioides HOM05D006323 ORTHO05D007827 1.6e-128 463.8 460 55.0
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 3.6e-128 462.6 466 52.8
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 2.3e-127 459.9 465 51.6
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 3.1e-127 459.5 465 52.3
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 4.0e-127 459.1 466 52.1
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 5.8e-126 455.3 476 52.7
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 1.7e-125 453.8 487 49.9
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 7.8e-123 444.9 502 50.2
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 1.8e-119 433.7 471 47.8
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 5.2e-119 432.2 482 49.0
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 4.4e-118 429.1 436 52.3
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 3.2e-116 422.9 470 48.7
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 1.3e-114 417.5 436 49.3
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 3.6e-112 409.5 468 47.0
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 9.9e-110 401.4 458 47.6
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 2.9e-109 399.8 466 47.9
AUR62037416 Chenopodium quinoa HOM05D006323 ORTHO05D007827 9.3e-108 394.8 469 45.8
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 1.2e-107 394.4 327 61.2
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 2.3e-106 390.2 464 47.4
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 5.6e-105 385.6 462 46.5
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 1.6e-104 384.0 468 47.2
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 1.6e-104 384.0 461 45.8
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 9.0e-103 378.3 464 46.8
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 9.0e-103 378.3 464 46.8
CAN.G724.31 Capsicum annuum HOM05D006323 ORTHO05D007827 7.6e-102 375.2 464 42.9
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 1.4e-100 370.9 463 43.6
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 2.7e-99 366.7 458 46.7
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.6e-96 357.5 462 44.4
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 1.4e-95 354.4 324 56.5
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 1.8e-95 354.0 462 43.7
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 4.0e-95 352.8 460 43.7
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 2.1e-91 340.5 375 48.3
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 8.2e-88 328.6 458 43.9
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 1.5e-86 324.3 321 54.5
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 5.0e-85 319.3 281 58.0
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 3.2e-84 316.6 297 56.9
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 6.7e-74 282.3 499 34.3
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 4.1e-63 246.5 345 40.3
COL.COLO4_28496 Corchorus olitorius HOM05D006323 ORTHO05D007827 1.7e-61 241.1 256 50.0
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.4e-58 231.5 534 32.0
Os12g0511000 Oryza sativa ssp. japonica HOM05D006323 ORTHO05D007827 1.6e-54 218.0 393 36.4
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 1.5e-49 201.4 249 48.6
AagrBONN_evm.TU.Sc2ySwM_362.2944 Anthoceros agrestis HOM05D006323 ORTHO05D007827 3.0e-42 177.2 366 32.5
Eucgr.L02719 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.6e-38 164.9 149 55.0
CBR_g25752 Chara braunii HOM05D006323 ORTHO05D007827 2.5e-36 157.5 563 23.6
HPP92_013381 Vanilla planifolia HOM05D006323 ORTHO05D007827 7.0e-31 139.4 211 41.7
TAR623G1714 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.3e-29 134.4 122 56.6
FvH4_3g44630 Fragaria vesca HOM05D006323 ORTHO05D007827 1.6e-27 128.3 205 39.0
MD08G1081200 Malus domestica HOM05D006323 ORTHO05D007827 2.8e-27 127.5 121 54.5
COL.COLO4_28497 Corchorus olitorius HOM05D006323 ORTHO05D007827 5.2e-26 123.2 130 48.5
SEGI_04434 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 1.7e-24 118.2 162 40.1
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 2.5e-20 104.4 76 67.1
unitig_8.g4875 Utricularia gibba HOM05D006323 ORTHO05D007827 2.5e-20 104.4 105 46.7
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 5.6e-20 103.2 73 67.1
Eucgr.C01112 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.1e-18 99.0 90 55.6
TAR623G1335 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.3e-18 97.8 65 66.2
Zm00001eb264620 Zea mays HOM05D006323 ORTHO05D007827 2.0e-17 94.7 334 26.9
QL04p027551 Quercus lobata HOM05D006323 ORTHO05D007827 2.4e-15 87.8 97 43.3
Oeu037483.1 Olea europaea HOM05D006323 ORTHO05D007827 4.1e-07 60.5 134 38.1


User provided reference genes

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