Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 3.7e-255 884.4 450 100.0
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 3.9e-241 837.8 450 94.7
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 7.7e-197 690.6 424 80.4
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 7.7e-197 690.6 420 83.3
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 2.1e-194 682.6 420 80.7
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 5.7e-192 674.5 436 76.8
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 1.4e-190 669.8 420 78.3
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 1.2e-189 666.8 420 77.9
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 2.0e-189 666.0 425 77.4
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 7.8e-189 664.1 449 74.6
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 2.3e-188 662.5 442 74.9
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 1.1e-187 660.2 431 75.6
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 4.7e-186 654.8 436 74.5
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 6.1e-186 654.4 429 75.8
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 8.0e-186 654.1 420 76.7
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 8.0e-186 654.1 431 74.9
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 1.4e-185 653.3 428 75.7
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 1.8e-185 652.9 439 73.6
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 3.0e-185 652.1 420 74.5
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 4.0e-185 651.7 413 77.5
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 6.8e-185 651.0 420 77.4
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 6.8e-185 651.0 429 74.1
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 8.9e-185 650.6 418 75.1
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 3.4e-184 648.7 418 75.8
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 7.5e-184 647.5 418 75.4
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 1.3e-183 646.7 418 77.3
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 2.2e-183 646.0 421 75.8
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 2.9e-183 645.6 413 76.8
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 4.6e-181 638.3 421 72.2
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 6.0e-181 637.9 429 74.1
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 3.9e-180 635.2 436 70.9
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 3.9e-180 635.2 424 75.0
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 3.9e-180 635.2 428 74.5
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 6.6e-180 634.4 407 76.7
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 8.6e-180 634.0 422 73.5
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 1.5e-179 633.3 418 73.0
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 3.3e-179 632.1 435 73.1
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 4.3e-179 631.7 432 73.4
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 9.5e-179 630.6 437 71.6
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 4.0e-177 625.2 415 72.5
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 1.2e-176 623.6 446 69.3
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 5.8e-176 621.3 417 73.6
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 2.9e-175 619.0 388 78.1
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 4.9e-175 618.2 437 68.9
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 4.9e-175 618.2 437 68.9
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 8.3e-175 617.5 415 71.3
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 3.2e-174 615.5 431 71.0
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 2.1e-173 612.8 408 71.8
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 1.3e-172 610.1 431 71.5
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 2.5e-171 605.9 386 75.4
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 7.3e-171 604.4 441 67.8
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 2.3e-169 599.4 457 67.6
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 5.8e-168 594.7 448 66.1
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 1.4e-166 590.1 541 58.4
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 7.1e-166 587.8 391 74.2
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 1.9e-163 579.7 388 71.4
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 2.6e-160 569.3 395 70.9
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 2.6e-160 569.3 419 69.9
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 4.4e-160 568.5 650 50.9
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 6.4e-159 564.7 445 66.7
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 7.1e-158 561.2 366 74.0
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 1.9e-155 553.1 443 65.2
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 4.7e-154 548.5 446 65.0
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 4.7e-154 548.5 429 66.4
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 7.6e-152 541.2 431 64.7
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 2.9e-151 539.3 447 65.1
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 3.5e-149 532.3 447 63.1
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 5.1e-148 528.5 436 64.0
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 1.5e-147 526.9 450 60.9
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 1.9e-147 526.6 436 60.1
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 9.6e-147 524.2 347 73.8
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 3.6e-146 522.3 552 52.7
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 6.9e-145 518.1 331 77.0
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 5.8e-144 515.0 349 72.8
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 1.9e-142 510.0 408 60.0
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 6.0e-141 505.0 331 74.9
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 7.9e-141 504.6 338 73.4
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 9.6e-139 497.7 422 58.8
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 2.1e-138 496.5 412 59.5
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.0e-132 477.6 319 73.0
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 2.1e-130 469.9 489 56.0
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 4.2e-126 455.7 436 56.4
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 8.8e-116 421.4 310 69.0
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 8.5e-111 404.8 281 72.2
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 8.5e-111 404.8 277 71.1
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 9.4e-110 401.4 340 61.2
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 2.2e-106 390.2 282 68.8
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 3.1e-105 386.3 441 47.4
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 1.0e-95 354.8 273 64.8
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 5.5e-94 349.0 301 61.1
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 1.0e-92 344.7 424 43.6
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 3.7e-82 309.7 317 53.9
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 3.8e-79 299.7 456 40.1
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 4.2e-78 296.2 195 72.3
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 1.8e-73 280.8 214 70.1
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 1.1e-70 271.6 170 80.0
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 1.6e-64 251.1 213 62.0
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 1.3e-55 221.5 158 70.9
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 4.7e-53 213.0 154 70.1
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 1.9e-49 201.1 160 61.9
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 2.4e-49 200.7 421 31.1
HPP92_028078 Vanilla planifolia HOM05D007061 ORTHO05D009017 1.8e-44 184.5 115 77.4
arahy.Tifrunner.gnm1.ann1.4L0SCR Arachis hypogaea HOM05D007061 ORTHO05D009017 6.4e-42 176.0 103 81.6
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 2.7e-40 170.6 101 83.2
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 1.1e-38 165.2 101 81.2
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 1.1e-38 165.2 101 81.2
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 9.0e-36 155.6 104 73.1
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 3.5e-32 143.7 75 85.3
AUR62041050 Chenopodium quinoa HOM05D007061 ORTHO05D009017 2.5e-17 94.4 62 71.0
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 6.2e-13 79.7 205 27.3
Lsat_1_v5_gn_4_131100 Lactuca sativa HOM05D007061 ORTHO05D004266 2.6e-11 74.3 53 60.4
Manes.04G057176 Manihot esculenta HOM05D007061 ORTHO05D005365 3.8e-10 70.5 45 73.3
Lsat_1_v5_gn_0_28960 Lactuca sativa HOM05D004968 ORTHO05D005922 3.2e-09 67.4 46 76.1
MD05G1238100 Malus domestica HOM05D007061 ORTHO05D009017 6.1e-08 63.2 49 67.3
Lsat_1_v5_gn_3_11400 Lactuca sativa HOM05D003461 ORTHO05D004386 7.4e-06 56.2 78 44.9


User provided reference genes

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