Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0451 Papaver somniferum HOM05D007540 ORTHO05D009531 3.0e-81 305.1 148 100.0
PSO732G0564 Papaver somniferum HOM05D007540 ORTHO05D009531 4.4e-72 274.6 149 89.9
PSO229G0059 Papaver somniferum HOM05D007540 ORTHO05D009531 7.0e-62 240.7 154 79.9
PSO675G6065 Papaver somniferum HOM05D007540 ORTHO05D009531 2.0e-61 239.2 154 79.2
PSO675G6877 Papaver somniferum HOM05D007540 ORTHO05D009531 2.0e-61 239.2 154 79.2
PSO229G0110 Papaver somniferum HOM05D007540 ORTHO05D009531 1.4e-57 226.5 150 75.3
PSO732G0493 Papaver somniferum HOM05D007540 ORTHO05D009531 1.0e-36 157.1 157 55.4
PSO828G0001 Papaver somniferum HOM05D007540 ORTHO05D009531 1.0e-36 157.1 157 55.4
PSO732G0153 Papaver somniferum HOM05D007540 ORTHO05D009531 3.3e-27 125.6 160 48.1
Aqoxy4G01164 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 4.0e-25 118.6 147 44.2
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-23 113.2 142 44.4
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 2.1e-21 106.3 142 43.7
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 2.7e-21 105.9 142 42.3
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 1.7e-20 103.2 119 52.1
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-20 103.2 142 40.8
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 2.3e-20 102.8 134 42.5
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 3.0e-20 102.4 134 43.3
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 3.0e-20 102.4 142 41.5
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 6.6e-20 101.3 134 38.8
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 1.1e-19 100.5 134 45.5
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 1.5e-19 100.1 143 40.6
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 1.9e-19 99.8 142 42.3
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 3.3e-19 99.0 134 43.3
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 3.3e-19 99.0 134 42.5
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 7.3e-19 97.8 134 39.6
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 7.3e-19 97.8 134 39.6
CANSAT25G3303 Cannabis sativa HOM05D007540 ORTHO05D009531 7.3e-19 97.8 135 41.5
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-18 97.1 139 39.6
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-18 97.1 145 38.6
CANSAT25G0386 Cannabis sativa HOM05D007540 ORTHO05D009531 1.6e-18 96.7 134 41.0
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 1.6e-18 96.7 134 41.8
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 1.6e-18 96.7 142 40.1
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 4.7e-18 95.1 134 40.3
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 8.1e-18 94.4 134 38.1
Os06g0517700 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 8.1e-18 94.4 142 41.5
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 1.4e-17 93.6 142 40.8
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 1.8e-17 93.2 134 41.0
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 5.2e-17 91.7 142 35.9
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.8e-17 91.3 135 42.2
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.8e-17 91.3 135 42.2
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 8.9e-17 90.9 142 39.4
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 1.2e-16 90.5 143 39.9
Os06g0514100 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.2e-16 90.5 141 39.7
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.2e-16 90.5 135 42.2
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.5e-16 90.1 142 36.6
BcaC01g04144 Brassica carinata HOM05D007540 ORTHO05D009531 2.6e-16 89.4 126 38.9
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.4e-16 89.0 135 41.5
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 4.4e-16 88.6 109 44.0
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 5.8e-16 88.2 142 36.6
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 5.8e-16 88.2 142 36.6
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 7.5e-16 87.8 142 38.0
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 9.9e-16 87.4 142 38.7
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 9.9e-16 87.4 134 36.6
Os06g0509900 Oryza sativa ssp. japonica HOM05D007540 ORTHO05D009531 1.7e-15 86.7 141 39.7
CARHR085710 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.2e-15 86.3 142 36.6
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 2.2e-15 86.3 144 38.9
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 3.7e-15 85.5 133 40.6
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 6.4e-15 84.7 142 39.4
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 9.2e-14 80.9 134 38.1
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.2e-13 80.5 133 40.6
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 1.6e-13 80.1 137 38.0
SalBow1G7590 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.6e-13 80.1 138 38.4
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 2.7e-13 79.3 134 37.3
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 3.5e-13 79.0 142 35.2
PSO423G0021 Papaver somniferum HOM05D007540 ORTHO05D009531 4.6e-13 78.6 92 42.4
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 7.8e-13 77.8 134 35.8
CARHR085180 Cardamine hirsuta HOM05D007540 ORTHO05D009531 7.8e-13 77.8 144 35.4
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 3.0e-12 75.9 142 34.5
PSO675G5260 Papaver somniferum HOM05D015201 ORTHO05D303909 3.9e-12 75.5 128 35.2
SalBow4G2623 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.1e-12 75.1 137 39.4
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.6e-12 74.7 110 42.7
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 1.5e-11 73.6 140 33.6
Carub.0001s2384 Capsella rubella HOM05D007540 ORTHO05D009531 1.5e-11 73.6 136 35.3
AT1G72260 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 4.3e-11 72.0 132 33.3
Carub.0001s2385 Capsella rubella HOM05D007540 ORTHO05D009531 5.6e-11 71.6 134 36.6
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 6.2e-10 68.2 143 32.9
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 8.1e-10 67.8 140 32.1
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 8.1e-10 67.8 140 32.1
PSO732G0334 Papaver somniferum HOM05D007540 ORTHO05D009531 8.1e-10 67.8 149 34.2
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 1.1e-09 67.4 142 33.8
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 3.1e-09 65.9 64 48.4
Carub.0007s0910 Capsella rubella HOM05D007540 ORTHO05D009531 1.5e-08 63.5 135 32.6
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 7.6e-08 61.2 145 31.0
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 1.3e-07 60.5 136 33.1
CARHR292600 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.3e-07 60.5 102 37.3
CARHR180400 Cardamine hirsuta HOM05D007540 ORTHO05D009531 1.1e-06 57.4 102 34.3
Aqoxy4G00580 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 3.2e-06 55.8 58 53.4
Aqoxy4G00581 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 3.2e-06 55.8 56 53.6
Carub.0002s0647 Capsella rubella HOM05D007540 ORTHO05D009531 4.2e-06 55.5 116 32.8
SalBow1G0974 Salvia bowleyana HOM05D007540 ORTHO05D009531 7.1e-06 54.7 62 48.4
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 9.2e-06 54.3 127 31.5


User provided reference genes

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