Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0315 Papaver somniferum HOM05D010555 ORTHO05D011546 5.6e-147 524.2 262 100.0
PSO541G2283 Papaver somniferum HOM05D010555 ORTHO05D011546 8.4e-135 483.8 256 95.3
PSO541G5193 Papaver somniferum HOM05D010555 ORTHO05D011546 3.7e-106 388.7 257 77.8
PSO675G6490 Papaver somniferum HOM05D010555 ORTHO05D011546 2.0e-96 356.3 243 73.7
PSO675G0294 Papaver somniferum HOM05D010555 ORTHO05D011546 2.0e-75 286.6 250 60.0
PSO675G3443 Papaver somniferum HOM05D010555 ORTHO05D011546 3.3e-75 285.8 258 58.1
PSO541G1881 Papaver somniferum HOM05D010555 ORTHO05D011546 8.2e-74 281.2 254 60.6
PSO541G4626 Papaver somniferum HOM05D010555 ORTHO05D011546 2.4e-73 279.6 255 61.6
PSO210G5303 Papaver somniferum HOM05D010555 ORTHO05D011546 4.4e-67 258.8 257 54.5
PSO210G2139 Papaver somniferum HOM05D010555 ORTHO05D011546 2.2e-66 256.5 259 53.7
PSO384G0835 Papaver somniferum HOM05D010555 ORTHO05D011546 7.2e-62 241.5 249 54.6
PSO210G6188 Papaver somniferum HOM05D010555 ORTHO05D011546 2.4e-49 199.9 252 46.0
PSO210G2635 Papaver somniferum HOM05D010555 ORTHO05D011546 2.4e-41 173.3 217 45.2
PSO339G3249 Papaver somniferum HOM05D010555 ORTHO05D011546 2.4e-41 173.3 220 43.2
PSO541G1053 Papaver somniferum HOM05D010555 ORTHO05D011546 3.6e-37 159.5 153 57.5
Pp3c12_24810 Physcomitrium patens HOM05D003065 ORTHO05D011546 6.4e-34 148.7 245 35.9
PSO210G7509 Papaver somniferum HOM05D010555 ORTHO05D011546 1.2e-32 144.4 254 38.2
AagrBONN_evm.TU.Sc2ySwM_368.999 Anthoceros agrestis HOM05D003065 ORTHO05D011546 1.6e-32 144.1 247 33.2
Mapoly0065s0011 Marchantia polymorpha HOM05D003065 ORTHO05D011546 6.0e-32 142.1 236 36.0
Pp3c3_37060 Physcomitrium patens HOM05D003065 ORTHO05D011546 2.6e-27 126.7 275 31.6
PSO541G4919 Papaver somniferum HOM05D010555 ORTHO05D011546 3.4e-27 126.3 238 35.3
PSO541G2922 Papaver somniferum HOM05D010555 ORTHO05D011546 4.4e-27 125.9 142 50.7
PSO675G7631 Papaver somniferum HOM05D010555 ORTHO05D011546 5.4e-25 119.0 142 50.7
CBR_g9048 Chara braunii HOM05D003065 ORTHO05D011546 1.6e-24 117.5 241 31.1
Mapoly0032s0039 Marchantia polymorpha HOM05D003065 ORTHO05D011546 3.5e-24 116.3 255 33.3
SEGI_12133 Sequoiadendron giganteum HOM05D003065 ORTHO05D011546 1.7e-23 114.0 145 42.8
PSO339G4366 Papaver somniferum HOM05D010555 ORTHO05D011546 1.1e-22 111.3 121 49.6
MCO04G316 Micromonas commoda HOM05D003065 ORTHO05D011546 2.1e-21 107.1 243 34.2
SMO198G0027 Selaginella moellendorffii HOM05D003065 ORTHO05D011546 2.4e-17 93.6 239 27.6
SMO203G0046 Selaginella moellendorffii HOM05D010555 ORTHO05D011546 3.9e-15 86.3 129 39.5
HanXRQChr17g0560931 Helianthus annuus HOM05D003065 ORTHO05D003802 1.9e-14 84.0 244 29.1
Potri.007G121800 Populus trichocarpa HOM05D003065 ORTHO05D003802 1.3e-13 81.3 232 25.4
Pp3c16_8270 Physcomitrium patens HOM05D003065 ORTHO05D003802 8.1e-13 78.6 253 26.5
GSVIVG01030621001 Vitis vinifera HOM05D003065 ORTHO05D003802 8.1e-13 78.6 264 26.5
BcaC07g42139 Brassica carinata HOM05D003065 ORTHO05D003802 2.4e-12 77.0 236 26.3
BraA09t42082Z Brassica rapa HOM05D003065 ORTHO05D003802 2.4e-12 77.0 238 26.5
Duzib248G1274 Durio zibethinus HOM05D003065 ORTHO05D003802 2.4e-12 77.0 240 26.7
BolC8t52711H Brassica oleracea HOM05D003065 ORTHO05D003802 4.0e-12 76.3 257 25.3
Migut.H01221 Erythranthe guttata HOM05D003065 ORTHO05D003802 4.0e-12 76.3 260 26.5
AT2G32340 Arabidopsis thaliana HOM05D003065 ORTHO05D003802 5.3e-12 75.9 223 24.2
DCAR_012955 Daucus carota HOM05D003065 ORTHO05D003802 5.3e-12 75.9 237 26.6
Manes.13G072700 Manihot esculenta HOM05D003065 ORTHO05D003802 6.9e-12 75.5 252 27.0
PGR142G1323 Punica granatum HOM05D003065 ORTHO05D003802 6.9e-12 75.5 215 27.4
Gohir.A13G059500 Gossypium hirsutum HOM05D003065 ORTHO05D003802 9.0e-12 75.1 258 27.1
TWI75G1157 Tripterygium wilfordii HOM05D003065 ORTHO05D003802 9.0e-12 75.1 249 23.3
Solyc12g005780.3 Solanum lycopersicum HOM05D003065 ORTHO05D003802 1.2e-11 74.7 236 27.1
Sopen12g001710 Solanum pennellii HOM05D003065 ORTHO05D003802 1.2e-11 74.7 236 27.1
unitig_21.g20057 Utricularia gibba HOM05D003065 ORTHO05D003802 1.2e-11 74.7 223 25.6
Atru.chr6.3154 Acer truncatum HOM05D003065 ORTHO05D003802 1.5e-11 74.3 240 25.4
Hma1.2p1_0613F.1_g189150 Hydrangea macrophylla HOM05D003065 ORTHO05D003802 1.5e-11 74.3 254 26.0
Peaxi162Scf00007g01221 Petunia axillaris HOM05D003065 ORTHO05D003802 1.5e-11 74.3 226 27.0
Sp1g04125 Schrenkiella parvula HOM05D003065 ORTHO05D003802 1.5e-11 74.3 226 26.1
Sc12g0002370 Simmondsia chinensis HOM05D003065 ORTHO05D003802 1.5e-11 74.3 280 24.6
Gohir.D13G062500 Gossypium hirsutum HOM05D003065 ORTHO05D003802 2.0e-11 73.9 240 27.1
Dinv18529 Davidia involucrata HOM05D003065 ORTHO05D003802 2.6e-11 73.6 236 25.4
PSO675G8127 Papaver somniferum HOM05D003065 ORTHO05D003802 2.6e-11 73.6 234 26.1
Psat7g195560 Pisum sativum HOM05D003065 ORTHO05D003802 2.6e-11 73.6 237 24.9
TWI36G1576 Tripterygium wilfordii HOM05D003065 ORTHO05D003802 2.6e-11 73.6 228 23.7
MSTRG.12287 Avicennia marina HOM05D003065 ORTHO05D003802 3.4e-11 73.2 227 25.6
Carub.0004s1369 Capsella rubella HOM05D003065 ORTHO05D003802 3.4e-11 73.2 235 23.8
MSTRG.14153 Avicennia marina HOM05D003065 ORTHO05D003802 4.4e-11 72.8 225 26.2
Gorai.013G071000 Gossypium raimondii HOM05D003065 ORTHO05D003802 4.4e-11 72.8 240 26.7
Lalb_Chr03g0028881 Lupinus albus HOM05D003065 ORTHO05D003802 4.4e-11 72.8 237 24.9
MD09G1105400 Malus domestica HOM05D003065 ORTHO05D003802 4.4e-11 72.8 227 26.4
Nitab4.5_0005894g0020 Nicotiana tabacum HOM05D003065 ORTHO05D003802 4.4e-11 72.8 245 26.1
Thecc.02G162000 Theobroma cacao HOM05D003065 ORTHO05D003802 4.4e-11 72.8 240 25.8
Lalb_Chr01g0005571 Lupinus albus HOM05D003065 ORTHO05D003802 5.8e-11 72.4 237 24.9
PGR142G3240 Punica granatum HOM05D003065 ORTHO05D003802 5.8e-11 72.4 226 25.2
ECA233G0914 Erigeron canadensis HOM05D003065 ORTHO05D003802 7.6e-11 72.0 224 25.9
MBI02_g34314_MAGBIO Magnolia biondii HOM05D003065 ORTHO05D003802 7.6e-11 72.0 239 25.5
Ciclev10015457m.g Citrus clementina HOM05D003065 ORTHO05D003802 9.9e-11 71.6 247 24.7
Glyma.12G101300 Glycine max HOM05D003065 ORTHO05D003802 9.9e-11 71.6 223 24.7
Lj3g0014705 Lotus japonicus HOM05D003065 ORTHO05D003802 9.9e-11 71.6 223 25.6
Nitab4.5_0001176g0140 Nicotiana tabacum HOM05D003065 ORTHO05D003802 9.9e-11 71.6 244 26.2
PSO541G1708 Papaver somniferum HOM05D003065 ORTHO05D003802 9.9e-11 71.6 234 25.6
CiPaw.04G117500 Carya illinoinensis HOM05D003065 ORTHO05D003802 1.3e-10 71.2 226 26.1
COL.COLO4_12981 Corchorus olitorius HOM05D003065 ORTHO05D003802 1.3e-10 71.2 237 24.9
MD17G1093000 Malus domestica HOM05D003065 ORTHO05D003802 1.3e-10 71.2 226 26.1
CARHR004740 Cardamine hirsuta HOM05D003065 ORTHO05D003802 1.7e-10 70.9 223 25.6
Nn1g07002 Nelumbo nucifera HOM05D003065 ORTHO05D003802 1.7e-10 70.9 265 24.9
Prupe.3G220000 Prunus persica HOM05D003065 ORTHO05D003802 1.7e-10 70.9 223 24.7
Aqoxy4G02067 Aquilegia oxysepala HOM05D003065 ORTHO05D003802 2.2e-10 70.5 243 25.9
Thhalv10007929m.g Eutrema salsugineum HOM05D003065 ORTHO05D003802 2.2e-10 70.5 236 24.2
Nn1g03660 Nelumbo nucifera HOM05D003065 ORTHO05D003802 2.2e-10 70.5 227 24.7
CANSAT64G1715 Cannabis sativa HOM05D003065 ORTHO05D003802 2.9e-10 70.1 237 24.9
Phvul.011G106000 Phaseolus vulgaris HOM05D003065 ORTHO05D003802 2.9e-10 70.1 223 24.7
TPR.G19036 Trifolium pratense HOM05D003065 ORTHO05D003802 2.9e-10 70.1 224 25.0
Lj8A123T53 Lonicera japonica HOM05D003065 ORTHO05D003802 3.8e-10 69.7 226 25.7
Nitab4.5_0000631g0050 Nicotiana tabacum HOM05D003065 ORTHO05D003802 3.8e-10 69.7 263 25.5
EL10Ac9g20661 Beta vulgaris HOM05D003065 ORTHO05D003802 4.9e-10 69.3 255 23.9
CsaV3_2G035170 Cucumis sativus L. HOM05D003065 ORTHO05D003802 4.9e-10 69.3 237 24.9
Medtr4g046707 Medicago truncatula HOM05D003065 ORTHO05D003802 4.9e-10 69.3 237 24.1
BcaC07g36852 Brassica carinata HOM05D003065 ORTHO05D003802 6.4e-10 68.9 236 24.2
Cfa014437 Carpinus fangiana HOM05D003065 ORTHO05D003802 6.4e-10 68.9 226 25.7
Sabra17G0025600 Salix brachista HOM05D003065 ORTHO05D003802 6.4e-10 68.9 237 25.7
VMungo1127G1760 Vigna mungo HOM05D003065 ORTHO05D003802 6.4e-10 68.9 223 24.2
MELO3C019237.2 Cucumis melo HOM05D003065 ORTHO05D003802 8.4e-10 68.6 237 24.9
Os05g0499500 Oryza sativa ssp. japonica HOM05D003065 ORTHO05D003802 8.4e-10 68.6 254 23.6
Potri.017G038500 Populus trichocarpa HOM05D003065 ORTHO05D003802 8.4e-10 68.6 237 25.3
Thhalv10017883m.g Eutrema salsugineum HOM05D003065 ORTHO05D003802 1.1e-09 68.2 237 23.6
Potri.007G121900 Populus trichocarpa HOM05D003065 ORTHO05D003802 1.1e-09 68.2 244 25.8
RcHm_v2.0_Chr2g0160041 Rosa chinensis HOM05D003065 ORTHO05D003802 1.1e-09 68.2 240 24.6
FAN14G1636 Fragaria x ananassa HOM05D003065 ORTHO05D003802 1.4e-09 67.8 231 24.7
CSS0049428 Camellia sinensis var. sinensis HOM05D003065 ORTHO05D003802 1.9e-09 67.4 233 26.6
Carub.0001s0456 Capsella rubella HOM05D003065 ORTHO05D003802 1.9e-09 67.4 221 24.0
FAN02G0663 Fragaria x ananassa HOM05D003065 ORTHO05D003802 1.9e-09 67.4 231 24.7
AL1G15050 Arabidopsis lyrata HOM05D003065 ORTHO05D003802 2.4e-09 67.0 220 23.2
BcaC02g11329 Brassica carinata HOM05D003065 ORTHO05D003802 2.4e-09 67.0 223 24.7
FAN09G1506 Fragaria x ananassa HOM05D003065 ORTHO05D003802 2.4e-09 67.0 231 24.7
Pp3c25_14680 Physcomitrium patens HOM05D005596 ORTHO05D006994 2.4e-09 67.0 230 24.3
Sabra07G0098600 Salix brachista HOM05D003065 ORTHO05D003802 2.4e-09 67.0 237 25.7
SalBow1G7597 Salvia bowleyana HOM05D003065 ORTHO05D003802 2.4e-09 67.0 236 25.0
AT1G05270 Arabidopsis thaliana HOM05D003065 ORTHO05D003802 3.2e-09 66.6 220 23.2
C08p51790 Brassica napus HOM05D000310 ORTHO05D003802 3.2e-09 66.6 244 26.6
CiPaw.03G162600 Carya illinoinensis HOM05D003065 ORTHO05D003802 3.2e-09 66.6 224 24.6
Ca_19100_v3 Cicer arietinum L. HOM05D003065 ORTHO05D003802 3.2e-09 66.6 237 23.2
FvH4_6g43520 Fragaria vesca HOM05D003065 ORTHO05D003802 3.2e-09 66.6 231 24.2
THA.LOC104827382 Tarenaya hassleriana HOM05D003065 ORTHO05D003802 3.2e-09 66.6 225 24.0
Zm00001eb291870 Zea mays HOM05D003065 ORTHO05D003802 3.2e-09 66.6 244 24.2
Cc05_g05030 Coffea canephora HOM05D003065 ORTHO05D003802 5.4e-09 65.9 223 24.2
THA.LOC104800983 Tarenaya hassleriana HOM05D003065 ORTHO05D003802 5.4e-09 65.9 226 23.9
AagrBONN_evm.TU.Sc2ySwM_228.4125 Anthoceros agrestis HOM05D003065 ORTHO05D003802 7.1e-09 65.5 235 25.5
arahy.Tifrunner.gnm1.ann1.Y3QZTF Arachis hypogaea HOM05D003065 ORTHO05D003802 7.1e-09 65.5 237 23.6
ClCG02G008460 Citrullus lanatus HOM05D003065 ORTHO05D003802 7.1e-09 65.5 250 24.0
Sed0000552 Sechium edule HOM05D003065 ORTHO05D003802 7.1e-09 65.5 238 23.9
AUR62025067 Chenopodium quinoa HOM05D003065 ORTHO05D003802 9.3e-09 65.1 245 24.9
PGSC0003DMG400026175 Solanum tuberosum HOM05D003065 ORTHO05D003802 9.3e-09 65.1 237 24.9
Ca_19102_v3 Cicer arietinum L. HOM05D003065 ORTHO05D003802 1.2e-08 64.7 224 22.3
VMungo1127G1794 Vigna mungo HOM05D003065 ORTHO05D003802 1.2e-08 64.7 274 22.3
A08p36480 Brassica napus HOM05D003065 ORTHO05D003802 1.6e-08 64.3 239 23.4
BraA08t35551Z Brassica rapa HOM05D003065 ORTHO05D003802 1.6e-08 64.3 245 23.7
Sp4g14710 Schrenkiella parvula HOM05D003065 ORTHO05D003802 1.6e-08 64.3 223 22.9
C08p01860 Brassica napus HOM05D003065 ORTHO05D003802 2.1e-08 63.9 239 23.4
BolC8t46984H Brassica oleracea HOM05D003065 ORTHO05D003802 2.1e-08 63.9 239 23.4
Nitab4.5_0006207g0040 Nicotiana tabacum HOM05D003065 ORTHO05D003802 2.1e-08 63.9 275 24.4
SGA_v2.0_scaffold49G18335 Striga asiatica HOM05D003065 ORTHO05D003802 2.1e-08 63.9 230 24.3
A03p18140 Brassica napus HOM05D003065 ORTHO05D003802 3.5e-08 63.2 248 23.0
BolC8t52712H Brassica oleracea HOM05D003065 ORTHO05D003802 3.5e-08 63.2 235 25.1
CDE05G1053 Ceratophyllum demersum HOM05D003065 ORTHO05D003802 3.5e-08 63.2 229 24.0
BcaC05g24399 Brassica carinata HOM05D003065 ORTHO05D003802 4.6e-08 62.8 228 25.0
Mapoly0043s0066 Marchantia polymorpha HOM05D005596 ORTHO05D006994 6.0e-08 62.4 268 21.3
TWI39G0482 Tripterygium wilfordii HOM05D005596 ORTHO05D006994 6.0e-08 62.4 232 26.7
Medtr1g101540 Medicago truncatula HOM05D005596 ORTHO05D006994 7.8e-08 62.0 230 25.2
MSTRG.8768 Avicennia marina HOM05D005596 ORTHO05D006994 1.0e-07 61.6 271 26.2
PGR142G4172 Punica granatum HOM05D005596 ORTHO05D006994 1.0e-07 61.6 229 24.0
BcaB02g10475 Brassica carinata HOM05D003065 ORTHO05D003802 1.3e-07 61.2 230 23.0
BraA03t11073Z Brassica rapa HOM05D003065 ORTHO05D003802 1.3e-07 61.2 246 23.2
Ciclev10005112m.g Citrus clementina HOM05D005596 ORTHO05D006994 1.3e-07 61.2 228 26.8
SMO238G0005 Selaginella moellendorffii HOM05D003065 ORTHO05D003802 1.7e-07 60.8 225 27.1
A05p13140 Brassica napus HOM05D003065 ORTHO05D003802 2.3e-07 60.5 224 23.2
BraA05t20252Z Brassica rapa HOM05D003065 ORTHO05D003802 2.3e-07 60.5 224 23.2
Thhalv10002878m.g Eutrema salsugineum HOM05D003065 ORTHO05D003802 2.3e-07 60.5 224 23.2
TAR375G0353 Trochodendron aralioides HOM05D005596 ORTHO05D006994 2.3e-07 60.5 232 25.0
AL4G27732 Arabidopsis lyrata HOM05D003065 ORTHO05D003802 3.9e-07 59.7 222 23.4
C04p17290 Brassica napus HOM05D003065 ORTHO05D003802 3.9e-07 59.7 224 23.2
BolC4t23281H Brassica oleracea HOM05D003065 ORTHO05D003802 3.9e-07 59.7 224 23.2
Migut.F00380 Erythranthe guttata HOM05D005596 ORTHO05D006994 3.9e-07 59.7 272 25.7
SalBow1G5165 Salvia bowleyana HOM05D003065 ORTHO05D003802 3.9e-07 59.7 227 25.6
ATR0794G140 Amborella trichopoda HOM05D003065 ORTHO05D003802 5.1e-07 59.3 150 28.0
Medtr6g055230 Medicago truncatula HOM05D003065 ORTHO05D003802 5.1e-07 59.3 213 23.0
Eucgr.K00218 Eucalyptus grandis HOM05D005596 ORTHO05D006994 6.6e-07 58.9 225 23.1
CANSAT21G1758 Cannabis sativa HOM05D005596 ORTHO05D006994 8.7e-07 58.5 231 26.0
Actinidia34077 Actinidia chinensis HOM05D005596 ORTHO05D006994 1.1e-06 58.2 234 26.1
CBR_g51235 Chara braunii HOM05D003065 ORTHO05D003802 1.1e-06 58.2 225 24.0
MD17G1092800 Malus domestica HOM05D003065 ORTHO05D003802 1.1e-06 58.2 223 24.2
PSO478G4610 Papaver somniferum HOM05D005596 ORTHO05D006994 1.1e-06 58.2 234 24.8
TAR626G0646 Trochodendron aralioides HOM05D003065 ORTHO05D003802 1.5e-06 57.8 116 27.6
BcaB01g03983 Brassica carinata HOM05D003065 ORTHO05D003802 2.5e-06 57.0 223 22.9
BcaC01g05909 Brassica carinata HOM05D003065 ORTHO05D003802 2.5e-06 57.0 223 22.9
C03p21170 Brassica napus HOM05D003065 ORTHO05D003802 2.5e-06 57.0 223 22.9
PSO782G2992 Papaver somniferum HOM05D005596 ORTHO05D006994 3.3e-06 56.6 234 24.4
Aa31LG1G19430 Aethionema arabicum HOM05D003065 ORTHO05D003802 5.6e-06 55.8 235 24.3
Nn6g34264 Nelumbo nucifera HOM05D005596 ORTHO05D006994 5.6e-06 55.8 230 25.2
CiPaw.03G102200 Carya illinoinensis HOM05D005596 ORTHO05D006994 9.6e-06 55.1 238 23.9
Oeu022544.2 Olea europaea HOM05D005596 ORTHO05D006994 9.6e-06 55.1 277 23.8


User provided reference genes

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