Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0275 Papaver somniferum HOM05D007991 ORTHO05D010158 9.8e-37 156.4 84 100.0
Lsat_1_v5_gn_7_112301 Lactuca sativa HOM05D007991 ORTHO05D010158 1.4e-14 82.8 60 71.7
ECA236G0423 Erigeron canadensis HOM05D007991 ORTHO05D010158 2.0e-13 79.0 60 68.3
Aqoxy6G00820 Aquilegia oxysepala HOM05D007991 ORTHO05D010158 2.6e-13 78.6 67 65.7
EL10Ac4g08566 Beta vulgaris HOM05D007991 ORTHO05D010158 7.6e-13 77.0 81 54.3
FAN16G1552 Fragaria x ananassa HOM05D007991 ORTHO05D010158 7.6e-13 77.0 72 54.2
Medtr2g069650 Medicago truncatula HOM05D007991 ORTHO05D010158 7.6e-13 77.0 75 57.3
Cpa.g.sc10.36 Carica papaya HOM05D007991 ORTHO05D010158 9.9e-13 76.6 70 62.9
Prupe.4G140900 Prunus persica HOM05D007991 ORTHO05D010158 9.9e-13 76.6 57 68.4
TPR.G9765 Trifolium pratense HOM05D007991 ORTHO05D010158 1.3e-12 76.3 67 62.7
HanXRQChr11g0334671 Helianthus annuus HOM05D007991 ORTHO05D010158 1.7e-12 75.9 59 64.4
FAN25G2658 Fragaria x ananassa HOM05D007991 ORTHO05D010158 2.9e-12 75.1 72 52.8
FAN11G2864 Fragaria x ananassa HOM05D007991 ORTHO05D010158 3.8e-12 74.7 72 52.8
FAN21G1902 Fragaria x ananassa HOM05D007991 ORTHO05D010158 3.8e-12 74.7 72 52.8
Ah.07g206310 Amaranthus hybridus HOM05D007991 ORTHO05D010158 4.9e-12 74.3 59 64.4
MBI02_g12653_MAGBIO Magnolia biondii HOM05D007991 ORTHO05D010158 4.9e-12 74.3 62 64.5
Nn7g37867 Nelumbo nucifera HOM05D007991 ORTHO05D010158 6.4e-12 73.9 70 58.6
Lj3g0014492 Lotus japonicus HOM05D007991 ORTHO05D010158 1.1e-11 73.2 66 56.1
Peaxi162Scf00452g00812 Petunia axillaris HOM05D007991 ORTHO05D010158 1.4e-11 72.8 98 48.0
GSVIVG01035227001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.4e-11 72.8 68 57.4
Ciclev10023629m.g Citrus clementina HOM05D007991 ORTHO05D010158 1.9e-11 72.4 82 53.7
Manes.06G170901 Manihot esculenta HOM05D007991 ORTHO05D010158 1.9e-11 72.4 74 55.4
Manes.06G170500 Manihot esculenta HOM05D007991 ORTHO05D010158 2.4e-11 72.0 74 55.4
Atru.chr8.1056 Acer truncatum HOM05D007991 ORTHO05D010158 3.2e-11 71.6 54 68.5
CAN.G943.33 Capsicum annuum HOM05D007991 ORTHO05D010158 4.1e-11 71.2 53 67.9
AT3G12960 Arabidopsis thaliana HOM05D007991 ORTHO05D010158 5.4e-11 70.9 68 58.8
Sc16g0005380 Simmondsia chinensis HOM05D007991 ORTHO05D010158 7.1e-11 70.5 70 55.7
Carub.0003s1230 Capsella rubella HOM05D007991 ORTHO05D010158 9.2e-11 70.1 67 56.7
Lalb_Chr19g0133391 Lupinus albus HOM05D007991 ORTHO05D010158 9.2e-11 70.1 82 48.8
Sopen07g034570 Solanum pennellii HOM05D007991 ORTHO05D010158 9.2e-11 70.1 53 69.8
Ca_03685_v3 Cicer arietinum L. HOM05D007991 ORTHO05D010158 1.2e-10 69.7 61 65.6
Lalb_Chr03g0031611 Lupinus albus HOM05D007991 ORTHO05D010158 1.6e-10 69.3 53 64.2
AL3G24640 Arabidopsis lyrata HOM05D007991 ORTHO05D010158 2.7e-10 68.6 61 59.0
COL.COLO4_28875 Corchorus olitorius HOM05D007991 ORTHO05D010158 2.7e-10 68.6 72 55.6
Glyma.08G172800 Glycine max HOM05D007991 ORTHO05D010158 2.7e-10 68.6 78 51.3
BraA01t04089Z Brassica rapa HOM05D007991 ORTHO05D010158 4.6e-10 67.8 62 58.1
Gohir.A11G002600 Gossypium hirsutum HOM05D007991 ORTHO05D010158 4.6e-10 67.8 53 64.2
MD05G1219200 Malus domestica HOM05D007991 ORTHO05D010158 4.6e-10 67.8 83 48.2
CsaV3_4G031820 Cucumis sativus L. HOM05D005971 ORTHO05D007459 6.0e-10 67.4 72 55.6
Psat1g011440 Pisum sativum HOM05D007991 ORTHO05D010158 6.0e-10 67.4 58 60.3
Phvul.005G056100 Phaseolus vulgaris HOM05D007991 ORTHO05D010158 7.8e-10 67.0 82 48.8
PGR042G3415 Punica granatum HOM05D007991 ORTHO05D010158 7.8e-10 67.0 53 62.3
unitig_8.g4768 Utricularia gibba HOM05D007991 ORTHO05D010158 7.8e-10 67.0 58 62.1
COL.COLO4_04148 Corchorus olitorius HOM05D007991 ORTHO05D010158 1.0e-09 66.6 53 64.2
RcHm_v2.0_Chr5g0026701 Rosa chinensis HOM05D007991 ORTHO05D010158 1.0e-09 66.6 83 49.4
BcaC09g48284 Brassica carinata HOM05D007991 ORTHO05D010158 1.3e-09 66.2 70 55.7
C01p52180 Brassica napus HOM05D007991 ORTHO05D010158 1.3e-09 66.2 70 55.7
BolC1t05158H Brassica oleracea HOM05D007991 ORTHO05D010158 1.3e-09 66.2 70 55.7
CSS0033446 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 1.3e-09 66.2 57 57.9
GSVIVG01012568001 Vitis vinifera HOM05D007991 ORTHO05D010158 1.3e-09 66.2 84 50.0
Thhalv10022193m.g Eutrema salsugineum HOM05D007991 ORTHO05D010158 1.7e-09 65.9 67 55.2
Gorai.007G003200 Gossypium raimondii HOM05D007991 ORTHO05D010158 2.3e-09 65.5 53 62.3
Sp3g11110 Schrenkiella parvula HOM05D007991 ORTHO05D010158 3.0e-09 65.1 62 56.5
CARHR087490 Cardamine hirsuta HOM05D007991 ORTHO05D010158 3.9e-09 64.7 62 56.5
MELO3C010561.2 Cucumis melo HOM05D007991 ORTHO05D010158 3.9e-09 64.7 83 48.2
QL04p074011 Quercus lobata HOM05D007991 ORTHO05D010158 3.9e-09 64.7 85 49.4
TWI39G0184 Tripterygium wilfordii HOM05D007991 ORTHO05D010158 3.9e-09 64.7 75 49.3
CSS0001388 Camellia sinensis var. sinensis HOM05D007991 ORTHO05D010158 6.6e-09 63.9 73 49.3
CANSAT80G1088 Cannabis sativa HOM05D007991 ORTHO05D010158 6.6e-09 63.9 73 50.7
Cfa019429 Carpinus fangiana HOM05D007991 ORTHO05D010158 6.6e-09 63.9 50 66.0
Gohir.D11G002200 Gossypium hirsutum HOM05D007991 ORTHO05D010158 6.6e-09 63.9 53 60.4
Solyc07g066400.1 Solanum lycopersicum HOM05D007991 ORTHO05D010158 8.7e-09 63.5 103 44.7
Aa31LG8G190 Aethionema arabicum HOM05D007991 ORTHO05D010158 1.1e-08 63.2 70 51.4
SalBow2G0434 Salvia bowleyana HOM05D007991 ORTHO05D010158 1.5e-08 62.8 73 50.7
PGSC0003DMG400022239 Solanum tuberosum HOM05D007991 ORTHO05D010158 1.9e-08 62.4 105 42.9
BcaB04g21024 Brassica carinata HOM05D007991 ORTHO05D010158 3.3e-08 61.6 82 46.3
CiPaw.04G012700 Carya illinoinensis HOM05D007991 ORTHO05D010158 5.6e-08 60.8 95 42.1
ClCG11G016360 Citrullus lanatus HOM05D007991 ORTHO05D010158 8.1e-07 57.0 83 44.6
ClCG11G016370 Citrullus lanatus HOM05D007991 ORTHO05D010158 8.1e-07 57.0 83 44.6
Os08g0104400 Oryza sativa ssp. japonica HOM05D007991 ORTHO05D010158 1.1e-06 56.6 60 45.0
Duzib205G1447 Durio zibethinus HOM05D007991 ORTHO05D010158 1.4e-06 56.2 80 41.2
Zm00001eb260130 Zea mays HOM05D007991 ORTHO05D010158 2.4e-06 55.5 68 48.5
Nn4g23994 Nelumbo nucifera HOM05D007991 ORTHO05D010158 3.1e-06 55.1 69 49.3
MD05G1300500 Malus domestica HOM05D007991 ORTHO05D010158 5.2e-06 54.3 46 65.2


User provided reference genes

Program Settings