Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 7.7e-39 163.3 81 100.0
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 6.5e-38 160.2 81 96.3
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 6.8e-27 123.6 86 69.8
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 1.2e-26 122.9 86 70.9
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 2.0e-26 122.1 92 69.6
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 2.6e-26 121.7 77 76.6
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 7.5e-26 120.2 89 69.7
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 9.8e-26 119.8 91 64.8
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 9.8e-26 119.8 91 64.8
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 9.8e-26 119.8 94 64.9
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 1.7e-25 119.0 90 67.8
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 2.2e-25 118.6 85 71.8
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 2.2e-25 118.6 88 68.2
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 2.9e-25 118.2 89 65.2
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 3.7e-25 117.9 91 63.7
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 4.9e-25 117.5 91 63.7
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 6.4e-25 117.1 94 62.8
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 1.4e-24 115.9 101 61.4
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 1.4e-24 115.9 89 67.4
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.4e-24 115.9 91 63.7
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.8e-24 115.5 89 64.0
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.4e-24 115.2 91 64.8
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 2.4e-24 115.2 85 71.8
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 5.4e-24 114.0 99 60.6
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.4e-24 114.0 91 63.7
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 5.4e-24 114.0 92 63.0
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 5.4e-24 114.0 88 64.8
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 7.0e-24 113.6 83 69.9
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 7.0e-24 113.6 97 62.9
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 9.2e-24 113.2 100 57.0
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 1.2e-23 112.8 91 65.9
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 1.2e-23 112.8 91 65.9
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 2.0e-23 112.1 96 59.4
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 2.0e-23 112.1 86 65.1
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 2.0e-23 112.1 95 63.2
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 2.7e-23 111.7 91 62.6
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 4.6e-23 110.9 89 66.3
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 5.9e-23 110.5 82 67.1
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 7.8e-23 110.2 99 58.6
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 1.0e-22 109.8 88 63.6
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 1.0e-22 109.8 89 61.8
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.0e-22 109.8 89 61.8
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 1.0e-22 109.8 91 64.8
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 3.0e-22 108.2 99 56.6
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 3.9e-22 107.8 99 57.6
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 3.9e-22 107.8 81 67.9
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 5.0e-22 107.5 87 65.5
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 5.0e-22 107.5 99 56.6
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 6.6e-22 107.1 94 59.6
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 6.6e-22 107.1 89 61.8
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 1.1e-21 106.3 93 58.1
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 1.5e-21 105.9 99 55.6
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 1.5e-21 105.9 82 65.9
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 1.5e-21 105.9 66 80.3
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.9e-21 105.5 82 64.6
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 2.5e-21 105.1 90 58.9
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 2.5e-21 105.1 90 61.1
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 2.5e-21 105.1 91 58.2
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 4.3e-21 104.4 92 60.9
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 5.6e-21 104.0 84 60.7
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 1.6e-20 102.4 91 57.1
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 2.1e-20 102.1 82 57.3
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 2.1e-20 102.1 96 56.2
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 2.1e-20 102.1 77 68.8
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 2.1e-20 102.1 97 54.6
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 2.1e-20 102.1 61 77.0
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 2.8e-20 101.7 77 67.5
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 2.8e-20 101.7 77 67.5
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 4.7e-20 100.9 94 53.2
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 4.7e-20 100.9 94 53.2
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 4.7e-20 100.9 95 57.9
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 8.0e-20 100.1 95 53.7
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 8.0e-20 100.1 95 53.7
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 8.0e-20 100.1 95 53.7
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 2.3e-19 98.6 53 83.0
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 3.1e-19 98.2 79 62.0
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 5.2e-19 97.4 95 51.6
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 5.2e-19 97.4 95 51.6
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 8.9e-19 96.7 94 55.3
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 8.9e-19 96.7 78 64.1
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 2.0e-18 95.5 94 54.3
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 2.0e-18 95.5 79 63.3
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 3.4e-18 94.7 86 58.1
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 4.4e-18 94.4 66 63.6
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 9.8e-18 93.2 74 63.5
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 1.3e-17 92.8 55 76.4
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 1.3e-17 92.8 81 58.0
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 1.3e-17 92.8 55 76.4
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 6.4e-17 90.5 78 62.8
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 6.4e-17 90.5 55 72.7
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 1.1e-16 89.7 100 50.0
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 4.1e-16 87.8 70 61.4
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 7.0e-16 87.0 77 59.7
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 9.2e-16 86.7 79 62.0
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 1.6e-15 85.9 74 59.5
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 1.6e-15 85.9 63 65.1
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 1.6e-15 85.9 74 64.9
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 3.5e-15 84.7 82 53.7
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 6.0e-15 84.0 86 57.0
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 1.0e-14 83.2 73 57.5
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 6.6e-14 80.5 75 58.7
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 3.3e-13 78.2 68 58.8
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 9.5e-13 76.6 81 51.9
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 1.2e-12 76.3 50 76.0
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 2.8e-12 75.1 43 79.1
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 4.7e-12 74.3 72 55.6
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 1.1e-11 73.2 43 79.1
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 6.8e-11 70.5 40 75.0
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 1.3e-09 66.2 74 48.6
CDE04G2580 Ceratophyllum demersum HOM05D007135 ORTHO05D008880 1.1e-08 63.2 68 47.1
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 5.1e-06 54.3 43 67.4
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 5.1e-06 54.3 43 67.4


User provided reference genes

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