Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0151 Papaver somniferum HOM05D005261 ORTHO05D006180 2.3e-204 715.3 352 100.0
PSO541G3947 Papaver somniferum HOM05D005261 ORTHO05D006180 1.3e-199 699.5 352 97.4
PSO447G0033 Papaver somniferum HOM05D005261 ORTHO05D006180 3.9e-196 688.0 352 95.5
Duzib093G0733 Durio zibethinus HOM05D005261 ORTHO05D006180 3.4e-131 472.2 337 69.4
Ciclev10001407m.g Citrus clementina HOM05D005261 ORTHO05D006180 4.4e-131 471.9 343 67.3
Prupe.1G509000 Prunus persica HOM05D005261 ORTHO05D006180 7.5e-131 471.1 344 68.0
Thecc.08G114100 Theobroma cacao HOM05D005261 ORTHO05D006180 1.3e-130 470.3 347 66.9
GSVIVG01008967001 Vitis vinifera HOM05D005261 ORTHO05D006180 1.7e-130 469.9 349 67.3
Gorai.010G045400 Gossypium raimondii HOM05D005261 ORTHO05D006180 2.2e-130 469.5 339 69.0
Cpa.g.sc77.98 Carica papaya HOM05D005261 ORTHO05D006180 4.9e-130 468.4 345 67.5
Cfa015937 Carpinus fangiana HOM05D005261 ORTHO05D006180 6.4e-130 468.0 335 68.7
Atru.chr13.1289 Acer truncatum HOM05D005261 ORTHO05D006180 8.3e-130 467.6 340 68.5
Sabra02G0072100 Salix brachista HOM05D005261 ORTHO05D006180 1.1e-129 467.2 342 66.7
Manes.02G212400 Manihot esculenta HOM05D005261 ORTHO05D006180 1.4e-129 466.8 321 70.4
Gohir.D06G040600 Gossypium hirsutum HOM05D005261 ORTHO05D006180 1.9e-129 466.5 339 68.7
Aqoxy6G00521 Aquilegia oxysepala HOM05D005261 ORTHO05D006180 5.4e-129 464.9 348 69.8
CiPaw.06G023200 Carya illinoinensis HOM05D005261 ORTHO05D006180 9.2e-129 464.2 345 65.8
Actinidia31491 Actinidia chinensis HOM05D005261 ORTHO05D006180 2.7e-128 462.6 347 66.0
MD08G1174900 Malus domestica HOM05D005261 ORTHO05D006180 6.0e-128 461.5 343 65.9
Rhsim07G0199400 Rhododendron simsii HOM05D005261 ORTHO05D006180 7.8e-128 461.1 347 66.0
TWI36G1273 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 1.3e-127 460.3 340 66.5
CANSAT54G1848 Cannabis sativa HOM05D005261 ORTHO05D006180 1.7e-127 459.9 343 65.3
MBI02_g34268_MAGBIO Magnolia biondii HOM05D005261 ORTHO05D006180 2.3e-127 459.5 339 68.1
QL12p035629 Quercus lobata HOM05D005261 ORTHO05D006180 6.6e-127 458.0 345 67.0
RhsimUnG0073100 Rhododendron simsii HOM05D005261 ORTHO05D006180 1.9e-126 456.4 347 65.4
Dinv13059 Davidia involucrata HOM05D005261 ORTHO05D006180 2.5e-126 456.1 356 65.2
Nitab4.5_0002561g0060 Nicotiana tabacum HOM05D005261 ORTHO05D006180 2.5e-126 456.1 353 64.9
Dinv44727 Davidia involucrata HOM05D005261 ORTHO05D006180 4.3e-126 455.3 352 64.5
DCAR_023858 Daucus carota HOM05D005261 ORTHO05D006180 5.6e-126 454.9 335 66.6
Nitab4.5_0001915g0120 Nicotiana tabacum HOM05D005261 ORTHO05D006180 5.6e-126 454.9 325 66.5
Sed0017821 Sechium edule HOM05D005261 ORTHO05D006180 7.3e-126 454.5 346 65.0
MELO3C008135.2 Cucumis melo HOM05D005261 ORTHO05D006180 9.5e-126 454.1 318 69.2
CsaV3_2G033630 Cucumis sativus L. HOM05D005261 ORTHO05D006180 9.5e-126 454.1 318 69.2
PGR042G1365 Punica granatum HOM05D005261 ORTHO05D006180 9.5e-126 454.1 322 69.9
Hma1.2p1_0276F.1_g111380 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 1.2e-125 453.8 336 67.0
vmacro04773 Vaccinium macrocarpon HOM05D005261 ORTHO05D006180 1.2e-125 453.8 317 68.1
ClCG11G007980 Citrullus lanatus HOM05D005261 ORTHO05D006180 1.6e-125 453.4 344 65.1
Sc14g0001090 Simmondsia chinensis HOM05D005261 ORTHO05D006180 2.1e-125 453.0 314 71.7
Cc10_g05970 Coffea canephora HOM05D005261 ORTHO05D006180 2.8e-125 452.6 352 63.9
Haze_00548 Corylus avellana HOM05D005261 ORTHO05D006180 3.6e-125 452.2 367 63.5
CAN.G617.12 Capsicum annuum HOM05D005261 ORTHO05D006180 4.7e-125 451.8 334 66.8
Eucgr.H00927 Eucalyptus grandis HOM05D005261 ORTHO05D006180 4.7e-125 451.8 372 63.4
Sopen04g028560 Solanum pennellii HOM05D005261 ORTHO05D006180 8.1e-125 451.1 351 65.5
FAN13G1502 Fragaria x ananassa HOM05D005261 ORTHO05D006180 2.3e-124 449.5 336 65.2
VMungo1309G2277 Vigna mungo HOM05D005261 ORTHO05D006180 2.3e-124 449.5 348 66.4
FAN08G3477 Fragaria x ananassa HOM05D005261 ORTHO05D006180 4.0e-124 448.7 319 67.1
Nitab4.5_0003428g0020 Nicotiana tabacum HOM05D005261 ORTHO05D006180 4.0e-124 448.7 351 64.4
THA.LOC104813129 Tarenaya hassleriana HOM05D005261 ORTHO05D006180 4.0e-124 448.7 324 69.1
Solyc04g072390.3 Solanum lycopersicum HOM05D005261 ORTHO05D006180 5.2e-124 448.4 351 65.0
EL10Ac1g01697 Beta vulgaris HOM05D005261 ORTHO05D006180 6.8e-124 448.0 319 68.3
FvH4_5g38270 Fragaria vesca HOM05D005261 ORTHO05D006180 6.8e-124 448.0 319 67.1
FAN04G2261 Fragaria x ananassa HOM05D005261 ORTHO05D006180 8.9e-124 447.6 336 65.5
arahy.Tifrunner.gnm1.ann1.S5D643 Arachis hypogaea HOM05D005261 ORTHO05D006180 1.2e-123 447.2 331 66.5
RcHm_v2.0_Chr7g0240261 Rosa chinensis HOM05D005261 ORTHO05D006180 1.2e-123 447.2 353 63.2
Ah.03g139490 Amaranthus hybridus HOM05D005261 ORTHO05D006180 3.4e-123 445.7 337 64.7
FAN18G3314 Fragaria x ananassa HOM05D005261 ORTHO05D006180 3.4e-123 445.7 319 66.5
HanXRQChr02g0043751 Helianthus annuus HOM05D005261 ORTHO05D006180 4.4e-123 445.3 318 67.9
Os02g0750500 Oryza sativa ssp. japonica HOM05D005261 ORTHO05D006180 5.8e-123 444.9 346 65.0
TPR.G16249 Trifolium pratense HOM05D005261 ORTHO05D006180 5.8e-123 444.9 316 68.4
Phvul.009G027100 Phaseolus vulgaris HOM05D005261 ORTHO05D006180 1.7e-122 443.4 315 71.1
arahy.Tifrunner.gnm1.ann1.232HHD Arachis hypogaea HOM05D005261 ORTHO05D006180 2.2e-122 443.0 331 66.2
Glyma.04G107300 Glycine max HOM05D005261 ORTHO05D006180 3.7e-122 442.2 315 69.5
Duzib041G0715 Durio zibethinus HOM05D005261 ORTHO05D006180 1.1e-121 440.7 333 66.7
MSTRG.24247 Avicennia marina HOM05D005261 ORTHO05D006180 1.4e-121 440.3 361 60.1
Lsat_1_v5_gn_1_3980 Lactuca sativa HOM05D005261 ORTHO05D006180 2.7e-120 436.0 311 66.9
Ca_26314_v3 Cicer arietinum L. HOM05D005261 ORTHO05D006180 4.6e-120 435.3 317 68.5
A08p07950 Brassica napus HOM05D005261 ORTHO05D006180 7.8e-120 434.5 328 66.5
BraA08t32817Z Brassica rapa HOM05D005261 ORTHO05D006180 7.8e-120 434.5 328 66.5
BcaC07g37496 Brassica carinata HOM05D005261 ORTHO05D006180 1.3e-119 433.7 348 64.4
BolC8t47816H Brassica oleracea HOM05D005261 ORTHO05D006180 1.3e-119 433.7 348 64.4
Glyma.06G107100 Glycine max HOM05D005261 ORTHO05D006180 1.7e-119 433.3 347 64.8
Medtr2g460880 Medicago truncatula HOM05D005261 ORTHO05D006180 1.7e-119 433.3 314 67.5
Psat5g135960 Pisum sativum HOM05D005261 ORTHO05D006180 2.3e-119 433.0 315 67.6
Zm00001eb255040 Zea mays HOM05D005261 ORTHO05D006180 3.0e-119 432.6 341 65.1
BcaC02g11530 Brassica carinata HOM05D005261 ORTHO05D006180 6.6e-119 431.4 319 66.1
Sp1g30710 Schrenkiella parvula HOM05D005261 ORTHO05D006180 1.5e-118 430.3 348 62.9
Aa31LG6G9000 Aethionema arabicum HOM05D005261 ORTHO05D006180 1.9e-118 429.9 359 62.1
SEGI_02326 Sequoiadendron giganteum HOM05D005261 ORTHO05D006180 2.5e-118 429.5 370 60.8
CARHR034970 Cardamine hirsuta HOM05D005261 ORTHO05D006180 3.3e-118 429.1 320 66.9
Thhalv10004311m.g Eutrema salsugineum HOM05D005261 ORTHO05D006180 7.3e-118 427.9 356 61.2
BraA05t20051Z Brassica rapa HOM05D005261 ORTHO05D006180 9.6e-118 427.6 319 64.9
TAR625G1239 Trochodendron aralioides HOM05D005261 ORTHO05D006180 9.6e-118 427.6 319 68.0
Lj1g0011675 Lotus japonicus HOM05D005261 ORTHO05D006180 1.2e-117 427.2 316 68.0
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 1.6e-117 426.8 315 66.0
Carub.0001s3363 Capsella rubella HOM05D005261 ORTHO05D006180 2.8e-117 426.0 347 62.8
Migut.N03156 Erythranthe guttata HOM05D005261 ORTHO05D006180 3.6e-117 425.6 315 64.8
Gohir.A06G039700 Gossypium hirsutum HOM05D005261 ORTHO05D006180 4.7e-117 425.2 339 64.3
CDE02G3063 Ceratophyllum demersum HOM05D005261 ORTHO05D006180 8.1e-117 424.5 341 63.3
AL1G50930 Arabidopsis lyrata HOM05D005261 ORTHO05D006180 1.1e-116 424.1 348 62.4
AT1G36310 Arabidopsis thaliana HOM05D005261 ORTHO05D006180 4.0e-116 422.2 340 62.9
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 6.8e-116 421.4 315 64.8
SGA_v2.0_scaffold12G05968 Striga asiatica HOM05D005261 ORTHO05D006180 6.8e-116 421.4 330 61.8
BcaB03g13642 Brassica carinata HOM05D005261 ORTHO05D006180 3.4e-115 419.1 339 62.5
unitig_22.g6794 Utricularia gibba HOM05D005261 ORTHO05D006180 1.7e-114 416.8 316 62.0
Nn5g28978 Nelumbo nucifera HOM05D005261 ORTHO05D006180 2.2e-114 416.4 318 66.7
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 3.8e-114 415.6 310 66.5
TWI56G1213 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 3.8e-114 415.6 330 63.6
Peaxi162Scf00756g00436 Petunia axillaris HOM05D005261 ORTHO05D006180 5.1e-111 405.2 319 64.3
HPP92_001925 Vanilla planifolia HOM05D005261 ORTHO05D006180 1.5e-110 403.7 314 63.1
Potri.002G091300 Populus trichocarpa HOM05D005261 ORTHO05D006180 5.6e-110 401.7 366 57.4
AUR62034370 Chenopodium quinoa HOM05D005261 ORTHO05D006180 4.8e-109 398.7 290 67.6
Oeu020872.1 Olea europaea HOM05D005261 ORTHO05D006180 6.2e-109 398.3 316 62.7
AUR62022337 Chenopodium quinoa HOM05D005261 ORTHO05D006180 1.8e-108 396.7 290 66.9
Mapoly0189s0001 Marchantia polymorpha HOM05D005261 ORTHO05D006180 5.3e-108 395.2 322 59.9
AUR62033704 Chenopodium quinoa HOM05D005261 ORTHO05D006180 2.6e-107 392.9 315 62.9
AUR62036786 Chenopodium quinoa HOM05D005261 ORTHO05D006180 3.8e-106 389.0 315 61.6
ATR0564G365 Amborella trichopoda HOM05D005261 ORTHO05D006180 8.4e-106 387.9 304 65.1
SHI24797 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-105 386.3 320 60.6
AagrBONN_evm.TU.Sc2ySwM_228.1177 Anthoceros agrestis HOM05D005261 ORTHO05D006180 8.7e-103 377.9 321 57.6
SalBow8G1448 Salvia bowleyana HOM05D005261 ORTHO05D006180 1.9e-97 360.1 382 50.5
Pp3c8_16200 Physcomitrium patens HOM05D005261 ORTHO05D006180 4.2e-97 359.0 337 54.6
SMO361G0461 Selaginella moellendorffii HOM05D005261 ORTHO05D006180 2.1e-96 356.7 308 57.8
SHI53236 Sapria himalayana HOM05D005261 ORTHO05D006180 6.2e-93 345.1 327 53.5
Lj3C845T19 Lonicera japonica HOM05D005261 ORTHO05D006180 1.0e-87 327.8 215 74.9
SHI35611 Sapria himalayana HOM05D005261 ORTHO05D006180 6.9e-84 315.1 280 56.8
Hma1.2p1_0276F.1_g111370 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 9.0e-84 314.7 222 69.8
Lalb_Chr17g0344051 Lupinus albus HOM05D005261 ORTHO05D006180 1.8e-79 300.4 254 59.8
CBR_g15981 Chara braunii HOM05D005261 ORTHO05D006180 2.2e-77 293.5 336 45.5
ECA247G1584 Erigeron canadensis HOM05D000230 ORTHO05D006180 4.8e-77 292.4 242 61.6
COL.COLO4_16503 Corchorus olitorius HOM05D005261 ORTHO05D006180 2.0e-62 243.8 189 68.3
SHI34852 Sapria himalayana HOM05D005261 ORTHO05D006180 1.7e-58 230.7 295 46.1
SHI34844 Sapria himalayana HOM05D005261 ORTHO05D006180 4.0e-55 219.5 289 43.9
SHI20620 Sapria himalayana HOM05D005261 ORTHO05D006180 7.5e-54 215.3 273 45.1
PRCOL_00005291 Prasinoderma coloniale HOM05D005261 ORTHO05D006180 3.2e-49 199.9 353 38.2
SHI43763 Sapria himalayana HOM05D005261 ORTHO05D006180 3.6e-48 196.4 145 65.5
SHI46120 Sapria himalayana HOM05D005261 ORTHO05D006180 2.0e-46 190.7 140 66.4
SHI53472 Sapria himalayana HOM05D005261 ORTHO05D006180 1.4e-44 184.5 171 55.6
Oeu017307.1 Olea europaea HOM05D005261 ORTHO05D006180 1.1e-41 174.9 141 63.8
SHI32317 Sapria himalayana HOM05D005261 ORTHO05D006180 1.5e-41 174.5 313 35.5
SHI52923 Sapria himalayana HOM05D005261 ORTHO05D006180 7.2e-41 172.2 171 53.2
Cre04.g224002 Chlamydomonas reinhardtii HOM05D005261 ORTHO05D006180 6.3e-37 159.1 167 47.3
Rhsim10G0118000 Rhododendron simsii HOM05D005261 ORTHO05D006180 1.1e-36 158.3 181 49.2
SHI54958 Sapria himalayana HOM05D005261 ORTHO05D006180 1.6e-35 154.5 118 63.6
SHI49977 Sapria himalayana HOM05D005261 ORTHO05D006180 1.8e-31 141.0 165 46.1
SHI53189 Sapria himalayana HOM05D005261 ORTHO05D006180 6.8e-31 139.0 171 48.5
MCO14G461 Micromonas commoda HOM05D005261 ORTHO05D006180 1.8e-28 131.0 316 31.0
SHI49044 Sapria himalayana HOM05D005261 ORTHO05D006180 7.3e-25 119.0 126 52.4
PGSC0003DMG401027564 Solanum tuberosum HOM05D001663 ORTHO05D003186 1.4e-23 114.8 70 74.3
Lj3A845G93 Lonicera japonica HOM05D005261 ORTHO05D006180 8.3e-21 105.5 60 76.7
SHI51067 Sapria himalayana HOM05D005261 ORTHO05D006180 1.9e-20 104.4 137 43.1
SHI52089 Sapria himalayana HOM05D005261 ORTHO05D006180 6.0e-19 99.4 138 41.3
Rhsim13G0124000 Rhododendron simsii HOM05D005261 ORTHO05D006180 6.6e-18 95.9 183 37.2
SHI51747 Sapria himalayana HOM05D005261 ORTHO05D006180 8.6e-18 95.5 138 39.9
SHI41608 Sapria himalayana HOM05D005261 ORTHO05D006180 1.4e-15 88.2 145 40.7
SHI50342 Sapria himalayana HOM05D005261 ORTHO05D006180 4.3e-09 66.6 43 74.4


User provided reference genes

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