Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO675G0019 Papaver somniferum HOM05D001997 ORTHO05D004620 0.0e+00 1244.6 649 100.0
PSO017G4366 Papaver somniferum HOM05D001997 ORTHO05D004620 0.0e+00 1166.0 649 94.0
TAR622G0498 Trochodendron aralioides HOM05D001997 ORTHO05D004620 7.5e-177 624.8 665 53.7
TAR636G0474 Trochodendron aralioides HOM05D001997 ORTHO05D004620 1.4e-175 620.5 660 53.9
Hma1.2p1_0597F.1_g186510 Hydrangea macrophylla HOM05D001997 ORTHO05D004620 1.3e-173 614.0 657 53.7
Cfa015772 Carpinus fangiana HOM05D001997 ORTHO05D004620 9.5e-172 607.8 656 52.3
Dinv22695 Davidia involucrata HOM05D001997 ORTHO05D004620 3.6e-171 605.9 651 53.0
QL10p047463 Quercus lobata HOM05D001997 ORTHO05D004620 2.3e-170 603.2 666 52.3
Rhsim09G0030400 Rhododendron simsii HOM05D001997 ORTHO05D004620 1.2e-169 600.9 654 50.9
Aqoxy7G03960 Aquilegia oxysepala HOM05D001997 ORTHO05D004620 5.8e-169 598.6 667 52.2
MBI11_g35030_MAGBIO Magnolia biondii HOM05D001997 ORTHO05D004620 1.1e-167 594.3 662 50.6
Haze_00722 Corylus avellana HOM05D001997 ORTHO05D004620 2.4e-167 593.2 647 52.6
Potri.007G124700 Populus trichocarpa HOM05D001997 ORTHO05D004620 4.1e-167 592.4 662 51.5
Sabra17G0022600 Salix brachista HOM05D001997 ORTHO05D004620 2.3e-165 586.6 661 50.8
Duzib093G0427 Durio zibethinus HOM05D001997 ORTHO05D004620 3.0e-165 586.3 645 51.6
Manes.04G048600 Manihot esculenta HOM05D001997 ORTHO05D004620 3.9e-165 585.9 661 50.4
Potri.017G035700 Populus trichocarpa HOM05D001997 ORTHO05D004620 3.9e-165 585.9 660 50.8
CSS0007184 Camellia sinensis var. sinensis HOM05D001997 ORTHO05D004620 6.6e-165 585.1 649 50.5
Lj6C60T7 Lonicera japonica HOM05D001997 ORTHO05D004620 3.3e-164 582.8 656 50.0
Ciclev10019328m.g Citrus clementina HOM05D001997 ORTHO05D004620 2.1e-163 580.1 653 50.8
RcHm_v2.0_Chr1g0354651 Rosa chinensis HOM05D001997 ORTHO05D004620 3.6e-163 579.3 675 49.6
Actinidia35961 Actinidia chinensis HOM05D001997 ORTHO05D004620 8.1e-163 578.2 655 50.1
Peaxi162Scf00375g00082 Petunia axillaris HOM05D001997 ORTHO05D004620 1.1e-162 577.8 655 51.3
Gohir.D08G083300 Gossypium hirsutum HOM05D001997 ORTHO05D004620 3.1e-162 576.2 644 50.5
Sc19g0002180 Simmondsia chinensis HOM05D001997 ORTHO05D004620 3.1e-162 576.2 650 50.3
Atru.chr3.1570 Acer truncatum HOM05D001997 ORTHO05D004620 6.8e-162 575.1 666 50.9
Atru.chr3.1589 Acer truncatum HOM05D001997 ORTHO05D004620 6.8e-162 575.1 666 50.9
Nitab4.5_0010690g0010 Nicotiana tabacum HOM05D001997 ORTHO05D004620 1.2e-161 574.3 655 50.7
TWI36G0125 Tripterygium wilfordii HOM05D001997 ORTHO05D004620 1.5e-161 573.9 654 50.8
Gorai.004G087500 Gossypium raimondii HOM05D001997 ORTHO05D004620 2.6e-161 573.2 644 50.3
Dinv05995 Davidia involucrata HOM05D001997 ORTHO05D004620 5.8e-161 572.0 653 51.0
FAN01G1889 Fragaria x ananassa HOM05D001997 ORTHO05D004620 9.9e-161 571.2 675 48.4
FvH4_7g14000 Fragaria vesca HOM05D001997 ORTHO05D004620 2.9e-160 569.7 675 48.4
Gorai.006G186500 Gossypium raimondii HOM05D001997 ORTHO05D004620 2.9e-160 569.7 651 49.8
Lsat_1_v5_gn_6_55020 Lactuca sativa HOM05D001997 ORTHO05D004620 4.9e-160 568.9 642 49.1
FAN06G3325 Fragaria x ananassa HOM05D001997 ORTHO05D004620 6.4e-160 568.5 675 48.6
FAN06G4213 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.9e-159 567.0 675 48.4
FAN10G2611 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.2e-159 566.2 675 48.4
FAN10G3464 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.2e-159 566.2 675 48.4
Gohir.A08G074100 Gossypium hirsutum HOM05D001997 ORTHO05D004620 3.2e-159 566.2 644 50.0
Cc01_g08750 Coffea canephora HOM05D001997 ORTHO05D004620 5.4e-159 565.5 674 49.4
FAN03G0113 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.2e-158 564.3 675 48.1
Prupe.2G167200 Prunus persica HOM05D001997 ORTHO05D004620 2.1e-158 563.5 658 48.9
Sopen06g029850 Solanum pennellii HOM05D001997 ORTHO05D004620 2.1e-158 563.5 654 50.0
CiPaw.02G056300 Carya illinoinensis HOM05D001997 ORTHO05D004620 3.5e-158 562.8 636 50.8
CANSAT21G1219 Cannabis sativa HOM05D001997 ORTHO05D004620 4.6e-158 562.4 658 49.7
MD07G1139400 Malus domestica HOM05D001997 ORTHO05D004620 6.0e-158 562.0 663 48.6
FAN10G4317 Fragaria x ananassa HOM05D001997 ORTHO05D004620 3.0e-157 559.7 675 48.3
PGSC0003DMG400026903 Solanum tuberosum HOM05D001997 ORTHO05D004620 3.9e-157 559.3 654 49.8
PGR044G1365 Punica granatum HOM05D001997 ORTHO05D004620 1.1e-154 551.2 648 48.8
Oeu015677.2 Olea europaea HOM05D001997 ORTHO05D004620 1.8e-154 550.4 664 47.0
AUR62035000 Chenopodium quinoa HOM05D001997 ORTHO05D004620 2.4e-154 550.1 657 47.9
HanXRQChr02g0057961 Helianthus annuus HOM05D001997 ORTHO05D004620 2.2e-152 543.5 655 47.2
MSTRG.17660 Avicennia marina HOM05D001997 ORTHO05D004620 2.9e-152 543.1 662 45.9
HanXRQChr07g0186151 Helianthus annuus HOM05D001997 ORTHO05D004620 2.4e-151 540.0 646 47.7
MSTRG.12412 Avicennia marina HOM05D001997 ORTHO05D004620 9.3e-151 538.1 662 47.3
THA.LOC104802304 Tarenaya hassleriana HOM05D001997 ORTHO05D004620 3.0e-149 533.1 661 48.0
Glyma.11G094600 Glycine max HOM05D001997 ORTHO05D004620 6.6e-149 531.9 637 48.0
ECA233G5997 Erigeron canadensis HOM05D001997 ORTHO05D004620 1.1e-148 531.2 651 47.5
Sp4g25380 Schrenkiella parvula HOM05D001997 ORTHO05D004620 3.6e-147 526.2 649 47.6
Thecc.05G002900 Theobroma cacao HOM05D001997 ORTHO05D004620 3.6e-147 526.2 649 47.8
CDE08G0116 Ceratophyllum demersum HOM05D001997 ORTHO05D004620 4.8e-147 525.8 630 48.1
Thhalv10001801m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 1.5e-145 520.8 660 45.8
AT2G43250 Arabidopsis thaliana HOM05D001997 ORTHO05D004620 3.4e-145 519.6 657 46.6
Psat7g172720 Pisum sativum HOM05D001997 ORTHO05D004620 2.2e-144 516.9 652 47.4
Lj3g0010188 Lotus japonicus HOM05D001997 ORTHO05D004620 3.8e-144 516.2 658 47.0
SGA_v2.0_scaffold16G07570 Striga asiatica HOM05D001997 ORTHO05D004620 1.1e-143 514.6 657 46.4
Phvul.011G023500 Phaseolus vulgaris HOM05D001997 ORTHO05D004620 1.9e-143 513.8 647 47.0
arahy.Tifrunner.gnm1.ann1.JTZ133 Arachis hypogaea HOM05D001997 ORTHO05D004620 3.2e-143 513.1 643 48.5
Ah.05g167000 Amaranthus hybridus HOM05D001997 ORTHO05D004620 4.2e-143 512.7 644 46.9
BraA04t18717Z Brassica rapa HOM05D001997 ORTHO05D004620 9.3e-143 511.5 640 47.3
CARHR138340 Cardamine hirsuta HOM05D001997 ORTHO05D004620 2.7e-142 510.0 655 45.8
AUR62037461 Chenopodium quinoa HOM05D001997 ORTHO05D004620 4.6e-142 509.2 654 46.0
A04p32530 Brassica napus HOM05D001997 ORTHO05D004620 6.0e-142 508.8 640 47.7
Glyma.03G127700 Glycine max HOM05D001997 ORTHO05D004620 2.3e-141 506.9 644 46.0
C04p70220 Brassica napus HOM05D001997 ORTHO05D004620 3.0e-141 506.5 640 47.2
BcaC02g07197 Brassica carinata HOM05D001997 ORTHO05D004620 1.5e-140 504.2 631 47.5
BolC4t28526H Brassica oleracea HOM05D001997 ORTHO05D004620 1.9e-140 503.8 631 47.5
Ca_26058_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 3.3e-140 503.1 654 47.1
VMungo1127G1251 Vigna mungo HOM05D001997 ORTHO05D004620 1.3e-139 501.1 637 46.8
TPR.G13756 Trifolium pratense HOM05D001997 ORTHO05D004620 1.1e-138 498.0 649 47.0
Ca_30128_v3 Cicer arietinum L. HOM05D001997 ORTHO05D004620 1.4e-138 497.7 643 47.4
HPP92_007608 Vanilla planifolia HOM05D001997 ORTHO05D004620 1.3e-136 491.1 655 44.9
AL4G41910 Arabidopsis lyrata HOM05D001997 ORTHO05D004620 3.8e-136 489.6 658 45.0
BcaB06g29293 Brassica carinata HOM05D001997 ORTHO05D004620 6.4e-136 488.8 600 48.5
arahy.Tifrunner.gnm1.ann1.7X5TTD Arachis hypogaea HOM05D001997 ORTHO05D004620 1.4e-135 487.6 641 45.4
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 5.5e-135 485.7 644 44.7
Migut.N02417 Erythranthe guttata HOM05D001997 ORTHO05D004620 2.1e-134 483.8 661 44.2
Medtr4g076620 Medicago truncatula HOM05D001997 ORTHO05D004620 6.0e-134 482.3 638 45.9
Medtr4g076640 Medicago truncatula HOM05D001997 ORTHO05D004620 1.5e-132 477.6 644 44.9
Nitab4.5_0002368g0100 Nicotiana tabacum HOM05D001997 ORTHO05D004620 5.6e-132 475.7 573 48.7
Lj4g0020139 Lotus japonicus HOM05D001997 ORTHO05D004620 4.8e-131 472.6 632 44.9
ATR0743G280 Amborella trichopoda HOM05D001997 ORTHO05D004620 1.3e-128 464.5 662 45.0
unitig_22.g6172 Utricularia gibba HOM05D001997 ORTHO05D004620 3.2e-127 459.9 659 44.9
Os04g0490700 Oryza sativa ssp. japonica HOM05D001997 ORTHO05D004620 6.7e-125 452.2 685 41.5
Zm00001eb425530 Zea mays HOM05D001997 ORTHO05D004620 3.3e-124 449.9 675 41.2
TPR.G13749 Trifolium pratense HOM05D001997 ORTHO05D004620 3.7e-123 446.4 646 44.1
DCAR_010832 Daucus carota HOM05D001997 ORTHO05D004620 1.1e-122 444.9 606 45.5
Glyma.12G021000 Glycine max HOM05D001997 ORTHO05D004620 5.3e-122 442.6 635 43.1
Haze_01373 Corylus avellana HOM05D001997 ORTHO05D004620 9.0e-122 441.8 637 42.7
Nn5g27952 Nelumbo nucifera HOM05D001997 ORTHO05D004620 3.4e-121 439.9 524 48.9
Cfa015264 Carpinus fangiana HOM05D001997 ORTHO05D004620 5.0e-120 436.0 637 42.1
Sabra17G0022300 Salix brachista HOM05D001997 ORTHO05D004620 2.1e-118 430.6 588 45.6
Carub.0004s2573 Capsella rubella HOM05D001997 ORTHO05D004620 7.4e-116 422.2 656 41.8
SEGI_28245 Sequoiadendron giganteum HOM05D001997 ORTHO05D004620 1.4e-114 417.9 658 40.1
Eucgr.A00056 Eucalyptus grandis HOM05D001997 ORTHO05D004620 4.2e-111 406.4 419 53.7
Gohir.D09G164700 Gossypium hirsutum HOM05D001997 ORTHO05D004620 5.5e-111 406.0 433 52.2
Solyc06g073490.2 Solanum lycopersicum HOM05D001997 ORTHO05D004620 9.4e-111 405.2 417 54.4
Gohir.A09G169000 Gossypium hirsutum HOM05D001997 ORTHO05D004620 2.6e-108 397.1 433 51.7
Thhalv10001772m.g Eutrema salsugineum HOM05D001997 ORTHO05D004620 1.8e-98 364.4 650 38.5
Lalb_Chr01g0001101 Lupinus albus HOM05D001997 ORTHO05D004620 7.7e-97 359.0 385 53.0
C08p23950 Brassica napus HOM05D001997 ORTHO05D004620 2.7e-89 334.0 626 37.5
SalBow3G0527 Salvia bowleyana HOM05D001997 ORTHO05D004620 1.3e-83 315.1 349 52.1
BraA05t19355Z Brassica rapa HOM05D001997 ORTHO05D004620 2.8e-83 313.9 607 36.2
BolC4t22066H Brassica oleracea HOM05D001997 ORTHO05D004620 2.4e-82 310.8 607 36.4
A05p03690 Brassica napus HOM05D001997 ORTHO05D004620 9.1e-82 308.9 607 36.6
Glyma.19G130251 Glycine max HOM05D001997 ORTHO05D004620 2.7e-81 307.4 329 54.4
BcaC07g39373 Brassica carinata HOM05D001997 ORTHO05D004620 3.5e-81 307.0 607 35.9
BolC8t50019H Brassica oleracea HOM05D001997 ORTHO05D004620 4.5e-81 306.6 624 35.4
C04p04300 Brassica napus HOM05D001997 ORTHO05D004620 5.9e-81 306.2 607 36.2
Cpa.g.sc81.168 Carica papaya HOM05D001997 ORTHO05D004620 8.3e-75 285.8 658 32.2
A06p18770 Brassica napus HOM05D001997 ORTHO05D004620 7.0e-74 282.7 641 33.9
GSVIVG01013581001 Vitis vinifera HOM05D001997 ORTHO05D004620 5.0e-72 276.6 413 41.6
Mapoly0021s0032 Marchantia polymorpha HOM05D001997 ORTHO05D004620 8.6e-72 275.8 672 31.4
MD01G1056400 Malus domestica HOM05D001997 ORTHO05D004620 8.0e-70 269.2 442 39.1
FvH4_7g26521 Fragaria vesca HOM05D001997 ORTHO05D004620 2.3e-69 267.7 624 32.7
RcHm_v2.0_Chr1g0373181 Rosa chinensis HOM05D001997 ORTHO05D004620 8.3e-67 259.2 616 32.6
FAN06G2538 Fragaria x ananassa HOM05D001997 ORTHO05D004620 5.6e-63 246.5 624 31.4
FAN03G0465 Fragaria x ananassa HOM05D001997 ORTHO05D004620 4.0e-61 240.4 619 31.7
FAN10G3679 Fragaria x ananassa HOM05D001997 ORTHO05D004620 1.1e-58 232.3 432 36.6
BcaNung06617 Brassica carinata HOM05D001997 ORTHO05D004620 4.6e-57 226.9 597 32.5
FAN01G2316 Fragaria x ananassa HOM05D001997 ORTHO05D004620 4.9e-51 206.8 430 35.1
Pp3c13_12610 Physcomitrium patens HOM05D001997 ORTHO05D004620 3.9e-48 197.2 677 28.7
TPR.G11744 Trifolium pratense HOM05D001997 ORTHO05D004620 3.8e-43 180.6 314 40.1
BraA06t24958Z Brassica rapa HOM05D001997 ORTHO05D004620 8.6e-40 169.5 551 28.3
Actinidia28986 Actinidia chinensis HOM05D001997 ORTHO05D004620 5.6e-39 166.8 243 45.3
GSVIVG01013582001 Vitis vinifera HOM05D001997 ORTHO05D004620 1.2e-36 159.1 172 51.2
BcaB06g29296 Brassica carinata HOM05D001997 ORTHO05D004620 8.4e-35 152.9 191 51.3
BcaC07g39374 Brassica carinata HOM05D001997 ORTHO05D004620 1.3e-30 139.0 146 50.7
CAN.G138.1 Capsicum annuum HOM05D001997 ORTHO05D004620 3.1e-29 134.4 114 57.0
Lsat_1_v5_gn_5_125441 Lactuca sativa HOM05D001997 ORTHO05D004620 5.8e-28 130.2 124 57.3
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 7.6e-28 129.8 115 54.8
SHI06486 Sapria himalayana HOM05D002588 ORTHO05D002979 6.0e-25 120.2 110 55.5
BcaB01g03399 Brassica carinata HOM05D001997 ORTHO05D004620 4.8e-22 110.5 344 28.8
C04p70240 Brassica napus HOM05D001997 ORTHO05D004620 4.8e-22 110.5 95 58.9
CAN.G1014.21 Capsicum annuum HOM05D001997 ORTHO05D004620 4.8e-22 110.5 94 57.4
CAN.G765.4 Capsicum annuum HOM05D001997 ORTHO05D004620 6.9e-21 106.7 94 55.3
SMO356G0473 Selaginella moellendorffii HOM05D001997 ORTHO05D004620 9.0e-21 106.3 352 27.6
Dinv44213 Davidia involucrata HOM05D001997 ORTHO05D004620 1.2e-20 105.9 72 66.7
BcaB06g29294 Brassica carinata HOM05D001997 ORTHO05D004620 2.6e-20 104.8 157 43.9
MD01G1056500 Malus domestica HOM05D001997 ORTHO05D004620 1.3e-19 102.4 89 53.9
AagrBONN_evm.TU.Sc2ySwM_228.3298 Anthoceros agrestis HOM05D001997 ORTHO05D004620 2.9e-19 101.3 156 39.7
SalBow3G4162 Salvia bowleyana HOM05D001997 ORTHO05D004620 5.5e-18 97.1 95 47.4
Medtr4g076610 Medicago truncatula HOM05D001997 ORTHO05D004620 1.8e-16 92.0 80 53.8
BcaC02g07196 Brassica carinata HOM05D001997 ORTHO05D004620 5.1e-16 90.5 79 57.0
BolC4t28530H Brassica oleracea HOM05D001997 ORTHO05D004620 6.7e-16 90.1 130 42.3
BcaB06g29295 Brassica carinata HOM05D001997 ORTHO05D004620 9.6e-15 86.3 79 55.7
SGA_v2.0_scaffold4G02500 Striga asiatica HOM05D001997 ORTHO05D004620 1.3e-14 85.9 73 57.5
Actinidia11446 Actinidia chinensis HOM05D001997 ORTHO05D004620 4.8e-14 84.0 144 41.7
BolC4t28528H Brassica oleracea HOM05D001997 ORTHO05D004620 5.3e-13 80.5 98 48.0
TPR.G290 Trifolium pratense HOM05D001997 ORTHO05D004620 9.0e-13 79.7 51 74.5
C03p28740 Brassica napus HOM05D001997 ORTHO05D004620 9.3e-10 69.7 61 57.4
SalBow3G4229 Salvia bowleyana HOM05D001997 ORTHO05D004620 4.6e-09 67.4 137 34.3
BcaC05g28816 Brassica carinata HOM05D001997 ORTHO05D004620 5.1e-08 63.9 80 43.8
C04p70260 Brassica napus HOM05D001997 ORTHO05D004620 1.6e-06 58.9 53 56.6
BcaNung06616 Brassica carinata HOM05D001997 ORTHO05D004620 2.8e-06 58.2 81 42.0
FAN10G4060 Fragaria x ananassa HOM05D001997 ORTHO05D004620 4.8e-06 57.4 51 56.9


User provided reference genes

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