Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 8.1e-41 170.2 104 100.0
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 6.9e-40 167.2 104 98.1
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 6.7e-19 97.4 107 52.3
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 6.7e-19 97.4 104 53.8
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 4.3e-18 94.7 109 52.3
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 2.2e-17 92.4 101 54.5
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 3.7e-17 91.7 104 51.9
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 6.3e-17 90.9 62 72.6
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 8.2e-17 90.5 101 52.5
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 1.4e-16 89.7 62 74.2
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 1.4e-16 89.7 104 49.0
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 2.4e-16 89.0 62 69.4
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 3.1e-16 88.6 62 69.4
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 3.1e-16 88.6 104 51.9
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 4.1e-16 88.2 62 71.0
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 6.9e-16 87.4 91 53.8
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 1.5e-15 86.3 107 50.5
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 1.5e-15 86.3 62 67.7
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.0e-15 85.9 63 71.4
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.0e-15 85.9 63 71.4
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 2.6e-15 85.5 92 54.3
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 2.6e-15 85.5 63 69.8
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 2.6e-15 85.5 60 70.0
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 3.4e-15 85.1 104 49.0
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 1.0e-14 83.6 108 48.1
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 1.3e-14 83.2 62 64.5
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 1.7e-14 82.8 61 65.6
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 2.2e-14 82.4 60 70.0
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 2.9e-14 82.0 61 60.7
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 2.9e-14 82.0 62 62.9
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 5.0e-14 81.3 62 66.1
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 6.5e-14 80.9 63 66.7
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 1.1e-13 80.1 62 67.7
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 1.1e-13 80.1 60 68.3
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 1.4e-13 79.7 56 69.6
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 1.9e-13 79.3 91 50.5
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 2.5e-13 79.0 62 66.1
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 3.2e-13 78.6 61 63.9
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 3.2e-13 78.6 62 64.5
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 3.2e-13 78.6 62 64.5
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 3.2e-13 78.6 62 62.9
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 3.2e-13 78.6 59 67.8
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 4.2e-13 78.2 63 65.1
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 4.2e-13 78.2 62 61.3
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 7.2e-13 77.4 62 62.9
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 7.2e-13 77.4 62 62.9
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 7.2e-13 77.4 62 61.3
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 9.4e-13 77.0 86 48.8
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 9.4e-13 77.0 62 61.3
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 9.4e-13 77.0 62 62.9
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 9.4e-13 77.0 63 68.3
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 9.4e-13 77.0 62 61.3
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 1.2e-12 76.6 62 61.3
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 1.2e-12 76.6 62 62.9
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 1.6e-12 76.3 59 62.7
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 1.6e-12 76.3 61 65.6
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 1.6e-12 76.3 62 62.9
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 1.6e-12 76.3 60 66.7
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 2.1e-12 75.9 62 61.3
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 2.1e-12 75.9 63 61.9
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 2.1e-12 75.9 63 61.9
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 2.1e-12 75.9 61 63.9
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 2.7e-12 75.5 61 60.7
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 3.6e-12 75.1 62 59.7
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 3.6e-12 75.1 63 61.9
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 3.6e-12 75.1 62 62.9
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 4.6e-12 74.7 62 62.9
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 7.9e-12 73.9 62 62.9
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 1.0e-11 73.6 61 65.6
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 1.4e-11 73.2 55 65.5
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 1.4e-11 73.2 61 60.7
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 1.8e-11 72.8 62 58.1
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 2.3e-11 72.4 60 60.0
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 3.9e-11 71.6 65 61.5
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 5.1e-11 71.2 62 58.1
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 5.1e-11 71.2 102 43.1
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 6.7e-11 70.9 65 60.0
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 8.8e-11 70.5 55 61.8
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 8.8e-11 70.5 55 61.8
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 8.8e-11 70.5 55 61.8
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 8.8e-11 70.5 60 60.0
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 8.8e-11 70.5 65 60.0
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 3.3e-10 68.6 64 56.2
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 4.3e-10 68.2 55 60.0
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 4.3e-10 68.2 55 60.0
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 5.7e-10 67.8 65 58.5
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 7.4e-10 67.4 55 58.2
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 7.4e-10 67.4 55 58.2
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 7.4e-10 67.4 52 61.5
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 9.7e-10 67.0 55 60.0
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 9.7e-10 67.0 55 60.0
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 9.7e-10 67.0 107 52.3
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 9.7e-10 67.0 62 58.1
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 9.7e-10 67.0 62 58.1
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 1.3e-09 66.6 60 58.3
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 2.2e-09 65.9 64 57.8
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 2.8e-09 65.5 110 41.8
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 3.7e-09 65.1 54 57.4
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 8.2e-09 63.9 64 56.2
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 1.4e-08 63.2 47 61.7
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 1.8e-08 62.8 104 40.4
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 1.8e-08 62.8 63 58.7
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.4e-08 62.4 64 56.2
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 2.4e-08 62.4 64 56.2
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 2.4e-08 62.4 69 52.2
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 3.1e-08 62.0 64 56.2
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 4.1e-08 61.6 50 58.0
Os03g0138400 Oryza sativa ssp. japonica HOM05D005475 ORTHO05D006575 4.1e-08 61.6 53 50.9
unitig_26.g9548 Utricularia gibba HOM05D005475 ORTHO05D006575 6.9e-08 60.8 46 65.2
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 9.1e-08 60.5 84 44.0
RcHm_v2.0_Chr4g0394821 Rosa chinensis HOM05D005475 ORTHO05D006575 1.5e-07 59.7 42 66.7
TAR365G0748 Trochodendron aralioides HOM05D005475 ORTHO05D006575 2.6e-07 58.9 84 44.0
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 4.5e-07 58.2 56 55.4
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 4.5e-07 58.2 56 55.4
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 4.5e-07 58.2 56 55.4
FvH4_4g04340 Fragaria vesca HOM05D005475 ORTHO05D006575 4.5e-07 58.2 43 62.8
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 1.0e-06 57.0 87 40.2
FAN22G0728 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.3e-06 56.6 42 61.9
FAN22G1457 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.3e-06 56.6 42 61.9
Nn1g02914 Nelumbo nucifera HOM05D005475 ORTHO05D006575 1.3e-06 56.6 48 58.3
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 1.3e-06 56.6 99 39.4
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 3.8e-06 55.1 77 45.5
Glyma.20G086200 Glycine max HOM05D005475 ORTHO05D006575 5.0e-06 54.7 42 59.5
Rhsim04G0173600 Rhododendron simsii HOM05D005475 ORTHO05D006575 6.5e-06 54.3 95 38.9
Sc13g0006140 Simmondsia chinensis HOM05D005475 ORTHO05D006575 6.5e-06 54.3 46 65.2


User provided reference genes

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