Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO648G0129 Papaver somniferum HOM05D007482 ORTHO05D003038 1.5e-64 249.2 115 100.0
PSO339G1026 Papaver somniferum HOM05D007482 ORTHO05D003038 4.4e-56 221.1 115 88.7
PSO339G4707 Papaver somniferum HOM05D007482 ORTHO05D003038 1.3e-55 219.5 115 87.0
PSO630G0001 Papaver somniferum HOM05D007482 ORTHO05D003038 4.2e-54 214.5 95 100.0
PSO339G2623 Papaver somniferum HOM05D007482 ORTHO05D003038 7.3e-51 203.8 116 81.9
PSO339G0096 Papaver somniferum HOM05D007482 ORTHO05D003038 1.3e-42 176.4 118 69.5
PSO339G4924 Papaver somniferum HOM05D033620 ORTHO05D003038 2.6e-16 89.0 113 38.9
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 1.9e-14 82.8 114 37.7
PSO339G5535 Papaver somniferum HOM05D033620 ORTHO05D003038 3.2e-14 82.0 120 40.0
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 9.4e-14 80.5 101 39.6
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 9.4e-14 80.5 101 39.6
PSO782G2157 Papaver somniferum HOM05D005672 ORTHO05D003038 9.4e-14 80.5 117 35.9
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 1.2e-13 80.1 120 34.2
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 2.7e-13 79.0 113 40.7
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 6.1e-13 77.8 113 34.5
BcaB08g34258 Brassica carinata HOM05D007482 ORTHO05D003038 6.1e-13 77.8 131 35.1
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 6.1e-13 77.8 104 40.4
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 1.0e-12 77.0 112 36.6
AT1G12663 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 5.1e-12 74.7 111 34.2
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 6.7e-12 74.3 113 35.4
BcaB08g34260 Brassica carinata HOM05D007482 ORTHO05D003038 6.7e-12 74.3 117 35.0
Prupe.3G073800 Prunus persica HOM05D005672 ORTHO05D003038 6.7e-12 74.3 113 38.9
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 8.8e-12 73.9 112 37.5
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 8.8e-12 73.9 115 37.4
AT1G12660 Arabidopsis thaliana HOM05D007482 ORTHO05D003038 1.1e-11 73.6 119 35.3
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 1.1e-11 73.6 114 35.1
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 1.1e-11 73.6 114 37.7
A09p35330 Brassica napus HOM05D007482 ORTHO05D003038 2.0e-11 72.8 129 34.9
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 2.0e-11 72.8 112 35.7
AL1G24130 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 2.5e-11 72.4 113 33.6
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 3.3e-11 72.0 110 34.5
BcaC05g25121 Brassica carinata HOM05D007482 ORTHO05D003038 4.3e-11 71.6 108 32.4
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 4.3e-11 71.6 110 38.2
C05p30030 Brassica napus HOM05D007482 ORTHO05D003038 5.7e-11 71.2 124 33.9
C08p47200 Brassica napus HOM05D007482 ORTHO05D003038 5.7e-11 71.2 129 34.1
BolC5t31740H Brassica oleracea HOM05D007482 ORTHO05D003038 5.7e-11 71.2 124 33.9
Thhalv10023017m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 7.4e-11 70.9 112 34.8
Lsat_1_v5_gn_5_129980 Lactuca sativa HOM05D005672 ORTHO05D003038 9.7e-11 70.5 126 34.9
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 9.7e-11 70.5 117 35.9
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 9.7e-11 70.5 114 35.1
BcaB08g34257 Brassica carinata HOM05D007482 ORTHO05D003038 1.3e-10 70.1 96 38.5
BraA09t41718Z Brassica rapa HOM05D007482 ORTHO05D003038 1.3e-10 70.1 129 33.3
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 1.7e-10 69.7 121 36.4
A09p63700 Brassica napus HOM05D007482 ORTHO05D003038 2.2e-10 69.3 129 32.6
C05p44560 Brassica napus HOM05D007482 ORTHO05D003038 2.8e-10 68.9 123 35.8
BraA09t39063Z Brassica rapa HOM05D007482 ORTHO05D003038 2.8e-10 68.9 129 34.1
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 2.8e-10 68.9 106 41.5
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 2.8e-10 68.9 116 35.3
Duzib192G0281 Durio zibethinus HOM05D005672 ORTHO05D003038 2.8e-10 68.9 102 35.3
C08p47190 Brassica napus HOM05D007482 ORTHO05D003038 3.7e-10 68.6 114 34.2
BolC5t33183H Brassica oleracea HOM05D007482 ORTHO05D003038 3.7e-10 68.6 122 36.1
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 3.7e-10 68.6 117 35.0
BcaC05g25122 Brassica carinata HOM05D007482 ORTHO05D003038 8.2e-10 67.4 110 34.5
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 8.2e-10 67.4 102 34.3
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 8.2e-10 67.4 102 34.3
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 8.2e-10 67.4 102 34.3
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 8.2e-10 67.4 103 33.0
Sp1g11270 Schrenkiella parvula HOM05D007482 ORTHO05D003038 8.2e-10 67.4 131 30.5
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 1.1e-09 67.0 95 37.9
BcaB08g34259 Brassica carinata HOM05D007482 ORTHO05D003038 1.8e-09 66.2 118 35.6
C08p47220 Brassica napus HOM05D007482 ORTHO05D003038 1.8e-09 66.2 118 35.6
BolC8t52261H Brassica oleracea HOM05D007482 ORTHO05D003038 1.8e-09 66.2 118 35.6
CARHR012970 Cardamine hirsuta HOM05D007482 ORTHO05D003038 1.8e-09 66.2 117 32.5
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 1.8e-09 66.2 104 34.6
BcaC01g02807 Brassica carinata HOM05D007482 ORTHO05D003038 2.4e-09 65.9 118 34.7
C03p60060 Brassica napus HOM05D007482 ORTHO05D003038 2.4e-09 65.9 118 34.7
C05p44570 Brassica napus HOM05D007482 ORTHO05D003038 2.4e-09 65.9 117 33.3
BolC5t33184H Brassica oleracea HOM05D007482 ORTHO05D003038 2.4e-09 65.9 117 33.3
Carub.0001s1235 Capsella rubella HOM05D007482 ORTHO05D003038 3.1e-09 65.5 118 33.9
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 3.1e-09 65.5 104 33.7
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 4.1e-09 65.1 103 32.0
Aqoxy7G01810 Aquilegia oxysepala HOM05D005672 ORTHO05D003038 5.3e-09 64.7 111 36.9
A06p32510 Brassica napus HOM05D007482 ORTHO05D003038 5.3e-09 64.7 118 34.7
CARHR012960 Cardamine hirsuta HOM05D007482 ORTHO05D003038 5.3e-09 64.7 122 32.0
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 5.3e-09 64.7 103 34.0
BolC8t52260H Brassica oleracea HOM05D007482 ORTHO05D003038 6.9e-09 64.3 132 31.8
CARHR012950 Cardamine hirsuta HOM05D007482 ORTHO05D003038 6.9e-09 64.3 111 33.3
CARHR035990 Cardamine hirsuta HOM05D007482 ORTHO05D003038 6.9e-09 64.3 119 30.3
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 6.9e-09 64.3 104 33.7
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 6.9e-09 64.3 87 33.3
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 9.1e-09 63.9 121 35.5
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 2.0e-08 62.8 114 31.6
C08p47210 Brassica napus HOM05D007482 ORTHO05D003038 2.6e-08 62.4 129 31.8
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 2.6e-08 62.4 116 30.2
BraA06t26175Z Brassica rapa HOM05D007482 ORTHO05D003038 3.4e-08 62.0 96 36.5
BolC3t18270H Brassica oleracea HOM05D007482 ORTHO05D003038 4.5e-08 61.6 96 36.5
BolC8t52263H Brassica oleracea HOM05D007482 ORTHO05D003038 4.5e-08 61.6 96 36.5
Carub.0001s1239 Capsella rubella HOM05D007482 ORTHO05D003038 4.5e-08 61.6 76 44.7
BraA09t41719Z Brassica rapa HOM05D007482 ORTHO05D003038 7.7e-08 60.8 131 30.5
CARHR182820 Cardamine hirsuta HOM05D007482 ORTHO05D003038 7.7e-08 60.8 86 39.5
Thhalv10009569m.g Eutrema salsugineum HOM05D007482 ORTHO05D003038 1.0e-07 60.5 105 30.5
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 1.0e-07 60.5 114 33.3
A05p29160 Brassica napus HOM05D007482 ORTHO05D003038 1.3e-07 60.1 111 33.3
AL1G24120 Arabidopsis lyrata HOM05D007482 ORTHO05D003038 1.7e-07 59.7 90 36.7
A06p09020 Brassica napus HOM05D007482 ORTHO05D003038 1.7e-07 59.7 110 30.9
BraA06t24091Z Brassica rapa HOM05D007482 ORTHO05D003038 1.7e-07 59.7 110 30.9
ECA234G3627 Erigeron canadensis HOM05D005672 ORTHO05D003038 1.7e-07 59.7 89 36.0
A09p63710 Brassica napus HOM05D007482 ORTHO05D003038 2.2e-07 59.3 135 29.6
Nn8g39244 Nelumbo nucifera HOM05D005672 ORTHO05D003038 2.2e-07 59.3 113 34.5
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 2.2e-07 59.3 119 31.9
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 2.2e-07 59.3 114 32.5
ClCG09G002270 Citrullus lanatus HOM05D005672 ORTHO05D003038 2.9e-07 58.9 109 31.2
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 3.8e-07 58.5 124 33.1
Prupe.3G072600 Prunus persica HOM05D005672 ORTHO05D003038 3.8e-07 58.5 90 35.6
BolC8t52259H Brassica oleracea HOM05D007482 ORTHO05D003038 5.0e-07 58.2 112 33.0
Ciclev10027446m.g Citrus clementina HOM05D005672 ORTHO05D003038 5.0e-07 58.2 105 34.3
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 5.0e-07 58.2 124 33.1
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 6.5e-07 57.8 96 36.5
BcaC05g28380 Brassica carinata HOM05D007482 ORTHO05D003038 1.4e-06 56.6 77 37.7
Carub.0001s1238 Capsella rubella HOM05D007482 ORTHO05D003038 1.9e-06 56.2 125 31.2
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 2.5e-06 55.8 111 34.2
Nn8g39240 Nelumbo nucifera HOM05D005672 ORTHO05D003038 2.5e-06 55.8 112 31.2
Sp1g11260 Schrenkiella parvula HOM05D007482 ORTHO05D003038 2.5e-06 55.8 127 33.9
Duzib192G0991 Durio zibethinus HOM05D005672 ORTHO05D003038 3.2e-06 55.5 104 33.7
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 3.2e-06 55.5 120 33.3
BcaB07g32750 Brassica carinata HOM05D007482 ORTHO05D003038 5.5e-06 54.7 79 38.0
CiPaw.02G152000 Carya illinoinensis HOM05D005672 ORTHO05D003038 7.2e-06 54.3 120 29.2
Manes.04G121900 Manihot esculenta HOM05D005672 ORTHO05D003038 7.2e-06 54.3 103 30.1
Manes.04G122000 Manihot esculenta HOM05D005672 ORTHO05D003038 7.2e-06 54.3 103 30.1
Ciclev10026803m.g Citrus clementina HOM05D005672 ORTHO05D003038 9.4e-06 53.9 102 32.4


User provided reference genes

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