Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 1.1e-55 219.5 102 100.0
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 4.9e-22 107.8 69 75.4
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.4e-21 105.5 69 71.0
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 5.4e-21 104.4 69 69.6
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 5.4e-21 104.4 69 69.6
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 5.4e-21 104.4 68 72.1
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.0e-20 102.4 69 69.6
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 5.9e-20 100.9 89 58.4
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 5.0e-19 97.8 69 66.7
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 2.3e-16 89.0 54 75.9
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 6.8e-16 87.4 54 75.9
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 1.2e-15 86.7 48 81.2
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 2.6e-15 85.5 56 71.4
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 5.8e-15 84.3 47 80.9
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 7.5e-15 84.0 53 71.7
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 2.9e-14 82.0 68 61.8
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 3.7e-14 81.6 47 74.5
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 3.7e-14 81.6 48 79.2
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 8.3e-14 80.5 50 70.0
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.1e-13 80.1 48 77.1
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 1.1e-13 80.1 49 71.4
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.4e-13 79.7 50 76.0
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 1.8e-13 79.3 49 71.4
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.8e-13 79.3 48 72.9
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.8e-13 79.3 50 72.0
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 2.4e-13 79.0 50 68.0
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 2.4e-13 79.0 52 67.3
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 3.2e-13 78.6 47 72.3
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 3.2e-13 78.6 48 72.9
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 4.1e-13 78.2 33 97.0
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 4.1e-13 78.2 49 69.4
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 5.4e-13 77.8 47 70.2
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 5.4e-13 77.8 48 72.9
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 7.0e-13 77.4 48 72.9
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 7.0e-13 77.4 48 72.9
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 9.2e-13 77.0 48 75.0
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 9.2e-13 77.0 48 70.8
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 1.2e-12 76.6 51 68.6
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 1.2e-12 76.6 47 70.2
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 1.6e-12 76.3 50 66.0
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.6e-12 76.3 50 70.0
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.6e-12 76.3 47 74.5
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 1.6e-12 76.3 47 74.5
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 1.6e-12 76.3 48 72.9
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 2.0e-12 75.9 47 74.5
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.0e-12 75.9 47 74.5
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 2.7e-12 75.5 68 54.4
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 3.5e-12 75.1 47 74.5
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 6.0e-12 74.3 48 66.7
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 6.0e-12 74.3 47 72.3
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 6.0e-12 74.3 45 73.3
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 6.0e-12 74.3 47 74.5
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 7.8e-12 73.9 48 66.7
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 7.8e-12 73.9 49 73.5
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 7.8e-12 73.9 48 68.8
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 7.8e-12 73.9 47 74.5
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 1.0e-11 73.6 47 70.2
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.0e-11 73.6 48 68.8
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 1.3e-11 73.2 49 65.3
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.3e-11 73.2 49 71.4
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 1.7e-11 72.8 48 68.8
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.7e-11 72.8 49 71.4
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 2.3e-11 72.4 47 68.1
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 3.0e-11 72.0 48 66.7
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 3.0e-11 72.0 48 66.7
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 3.9e-11 71.6 45 68.9
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 3.9e-11 71.6 47 68.1
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 5.0e-11 71.2 48 64.6
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 5.0e-11 71.2 46 71.7
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 5.0e-11 71.2 48 66.7
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 6.6e-11 70.9 48 64.6
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 6.6e-11 70.9 48 66.7
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 8.6e-11 70.5 46 67.4
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 1.1e-10 70.1 45 68.9
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 1.1e-10 70.1 45 68.9
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 1.5e-10 69.7 47 68.1
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 1.9e-10 69.3 48 66.7
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 2.5e-10 68.9 47 63.8
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 2.6e-07 58.9 53 50.9
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 2.6e-07 58.9 69 49.3
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.3e-06 56.6 69 47.8
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 8.3e-06 53.9 57 40.4
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 8.3e-06 53.9 48 54.2


User provided reference genes

Program Settings