Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO381G0016 Papaver somniferum HOM05D005594 ORTHO05D006403 2.5e-66 255.4 134 100.0
PSO640G0001 Papaver somniferum HOM05D005594 ORTHO05D006403 2.5e-66 255.4 134 100.0
PSO229G0121 Papaver somniferum HOM05D005594 ORTHO05D006403 5.5e-66 254.2 134 99.3
PSO017G1526 Papaver somniferum HOM05D005594 ORTHO05D006403 1.9e-34 149.4 152 62.5
PSO541G2296 Papaver somniferum HOM05D005594 ORTHO05D006403 5.2e-24 114.8 111 63.1
PSO675G6381 Papaver somniferum HOM05D005594 ORTHO05D006403 8.9e-24 114.0 111 63.1
PSO170G0052 Papaver somniferum HOM05D005594 ORTHO05D006403 9.8e-23 110.5 103 67.0
Ciclev10001834m.g Citrus clementina HOM05D005594 ORTHO05D006403 8.4e-14 80.9 137 39.4
Duzib093G1195 Durio zibethinus HOM05D005594 ORTHO05D006403 3.2e-13 79.0 103 42.7
Nitab4.5_0000131g0040 Nicotiana tabacum HOM05D005594 ORTHO05D006403 5.4e-13 78.2 137 38.0
Nitab4.5_0009755g0010 Nicotiana tabacum HOM05D005594 ORTHO05D006403 5.4e-13 78.2 102 47.1
GSVIVG01009200001 Vitis vinifera HOM05D005594 ORTHO05D006403 5.4e-13 78.2 138 37.0
CSS0014517 Camellia sinensis var. sinensis HOM05D005594 ORTHO05D006403 9.2e-13 77.4 103 45.6
CSS0029582 Camellia sinensis var. sinensis HOM05D005594 ORTHO05D006403 9.2e-13 77.4 103 45.6
Actinidia19620 Actinidia chinensis HOM05D005594 ORTHO05D006403 2.1e-12 76.3 138 37.0
vmacro21357 Vaccinium macrocarpon HOM05D005594 ORTHO05D006403 2.7e-12 75.9 136 39.0
Peaxi162Scf01112g00131 Petunia axillaris HOM05D005594 ORTHO05D006403 4.6e-12 75.1 103 45.6
PGSC0003DMG400008701 Solanum tuberosum HOM05D005594 ORTHO05D006403 6.0e-12 74.7 103 45.6
GSVIVG01026918001 Vitis vinifera HOM05D005594 ORTHO05D006403 7.8e-12 74.3 136 35.3
Rhsim05G0205900 Rhododendron simsii HOM05D005594 ORTHO05D006403 1.3e-11 73.6 107 43.0
Gorai.009G228600 Gossypium raimondii HOM05D005594 ORTHO05D006403 1.7e-11 73.2 103 40.8
Thecc.08G073300 Theobroma cacao HOM05D005594 ORTHO05D006403 1.7e-11 73.2 136 35.3
Dinv42597 Davidia involucrata HOM05D005594 ORTHO05D006403 2.3e-11 72.8 108 40.7
Gohir.D05G221400 Gossypium hirsutum HOM05D005594 ORTHO05D006403 2.3e-11 72.8 103 40.8
Sopen04g030280 Solanum pennellii HOM05D005594 ORTHO05D006403 3.0e-11 72.4 103 44.7
COL.COLO4_35271 Corchorus olitorius HOM05D005594 ORTHO05D006403 3.9e-11 72.0 103 39.8
MBI16_g06011_MAGBIO Magnolia biondii HOM05D005594 ORTHO05D006403 3.9e-11 72.0 104 42.3
Oeu040880.1 Olea europaea HOM05D005594 ORTHO05D006403 5.1e-11 71.6 135 37.0
CAN.G193.4 Capsicum annuum HOM05D005594 ORTHO05D006403 6.6e-11 71.2 107 42.1
Gohir.A05G218700 Gossypium hirsutum HOM05D005594 ORTHO05D006403 6.6e-11 71.2 103 39.8
TAR625G0360 Trochodendron aralioides HOM05D005594 ORTHO05D006403 1.1e-10 70.5 103 40.8
Cc10_g08520 Coffea canephora HOM05D005594 ORTHO05D006403 1.5e-10 70.1 106 42.5
QL09p018366 Quercus lobata HOM05D005594 ORTHO05D006403 1.9e-10 69.7 79 46.8
QL12p040902 Quercus lobata HOM05D005594 ORTHO05D006403 1.9e-10 69.7 79 46.8
SalBow3G3026 Salvia bowleyana HOM05D005594 ORTHO05D006403 1.9e-10 69.7 133 33.8
Atru.chr13.987 Acer truncatum HOM05D005594 ORTHO05D006403 2.5e-10 69.3 103 43.7
Solyc04g076560.3 Solanum lycopersicum HOM05D005594 ORTHO05D006403 2.5e-10 69.3 103 43.7
TAR381G1609 Trochodendron aralioides HOM05D005594 ORTHO05D006403 3.3e-10 68.9 103 39.8
PGR042G0833 Punica granatum HOM05D005594 ORTHO05D006403 5.6e-10 68.2 100 41.0
Rhsim06G0070100 Rhododendron simsii HOM05D005594 ORTHO05D006403 5.6e-10 68.2 106 41.5
CiPaw.07G163500 Carya illinoinensis HOM05D005594 ORTHO05D006403 1.6e-09 66.6 105 43.8
CiPaw.01G111900 Carya illinoinensis HOM05D005594 ORTHO05D006403 2.1e-09 66.2 99 38.4
Lsat_1_v5_gn_3_110060 Lactuca sativa HOM05D005594 ORTHO05D006403 3.6e-09 65.5 109 38.5
Nn1g05624 Nelumbo nucifera HOM05D005594 ORTHO05D006403 3.6e-09 65.5 142 33.1
Sc15g0003090 Simmondsia chinensis HOM05D005594 ORTHO05D006403 3.6e-09 65.5 82 45.1
SGA_v2.0_scaffold62G21352 Striga asiatica HOM05D000582 ORTHO05D006403 3.6e-09 65.5 115 38.3
TWI31G0793 Tripterygium wilfordii HOM05D005594 ORTHO05D006403 4.7e-09 65.1 105 43.8
Prupe.1G535400 Prunus persica HOM05D005594 ORTHO05D006403 6.2e-09 64.7 138 37.7
Haze_22483 Corylus avellana HOM05D005594 ORTHO05D006403 1.1e-08 63.9 134 35.1
Lj8A496G24 Lonicera japonica HOM05D005594 ORTHO05D006403 1.1e-08 63.9 137 34.3
Oeu034716.2 Olea europaea HOM05D005594 ORTHO05D006403 1.1e-08 63.9 79 46.8
unitig_26.g9553 Utricularia gibba HOM05D005594 ORTHO05D006403 1.1e-08 63.9 103 41.7
Lj8A490G28 Lonicera japonica HOM05D005594 ORTHO05D006403 1.4e-08 63.5 137 34.3
ECA248G0412 Erigeron canadensis HOM05D005594 ORTHO05D006403 2.4e-08 62.8 103 37.9
SEGI_07360 Sequoiadendron giganteum HOM05D005594 ORTHO05D006403 3.1e-08 62.4 138 36.2
MSTRG.24680 Avicennia marina HOM05D005594 ORTHO05D006403 4.0e-08 62.0 103 39.8
CANSAT35G1072 Cannabis sativa HOM05D005594 ORTHO05D006403 4.0e-08 62.0 140 35.7
HanXRQChr09g0253981 Helianthus annuus HOM05D005594 ORTHO05D006403 4.0e-08 62.0 138 33.3
MD08G1202000 Malus domestica HOM05D005594 ORTHO05D006403 4.0e-08 62.0 94 40.4
Eucgr.F02158 Eucalyptus grandis HOM05D005594 ORTHO05D006403 6.8e-08 61.2 79 40.5
FAN08G3514 Fragaria x ananassa HOM05D005594 ORTHO05D006403 8.9e-08 60.8 108 38.0
Glyma.04G096700 Glycine max HOM05D005594 ORTHO05D006403 8.9e-08 60.8 106 39.6
CDE02G1340 Ceratophyllum demersum HOM05D005594 ORTHO05D006403 1.2e-07 60.5 103 36.9
FvH4_5g34380 Fragaria vesca HOM05D005594 ORTHO05D006403 1.5e-07 60.1 95 38.9
FAN18G0194 Fragaria x ananassa HOM05D005594 ORTHO05D006403 1.5e-07 60.1 95 38.9
ATR0767G044 Amborella trichopoda HOM05D005594 ORTHO05D006403 2.0e-07 59.7 104 37.5
VMungo1309G0327 Vigna mungo HOM05D005594 ORTHO05D006403 2.0e-07 59.7 99 39.4
Glyma.06G098500 Glycine max HOM05D005594 ORTHO05D006403 2.6e-07 59.3 106 38.7
Ah.07g203840 Amaranthus hybridus HOM05D005594 ORTHO05D006403 4.4e-07 58.5 78 42.3
EL10Ac1g00491 Beta vulgaris HOM05D005594 ORTHO05D006403 5.8e-07 58.2 137 33.6
Migut.N00274 Erythranthe guttata HOM05D005594 ORTHO05D006403 5.8e-07 58.2 104 38.5
SGA_v2.0_scaffold13G06499 Striga asiatica HOM05D005594 ORTHO05D006403 5.8e-07 58.2 106 40.6
arahy.Tifrunner.gnm1.ann1.7TC8PB Arachis hypogaea HOM05D005594 ORTHO05D006403 7.6e-07 57.8 134 33.6
arahy.Tifrunner.gnm1.ann1.X1J0TB Arachis hypogaea HOM05D005594 ORTHO05D006403 7.6e-07 57.8 134 33.6
DCAR_028088 Daucus carota HOM05D005594 ORTHO05D006403 9.9e-07 57.4 103 34.0
ClCG02G008140 Citrullus lanatus HOM05D005594 ORTHO05D006403 1.7e-06 56.6 142 29.6
Manes.18G056600 Manihot esculenta HOM05D005594 ORTHO05D006403 1.7e-06 56.6 103 35.9
HPP92_001778 Vanilla planifolia HOM05D005594 ORTHO05D006403 1.7e-06 56.6 103 35.0
Lj1g0021697 Lotus japonicus HOM05D005594 ORTHO05D006403 2.2e-06 56.2 144 33.3
RcHm_v2.0_Chr7g0234971 Rosa chinensis HOM05D005594 ORTHO05D006403 2.2e-06 56.2 95 37.9
Sed0005434 Sechium edule HOM05D005594 ORTHO05D006403 2.2e-06 56.2 135 28.9
Hund26823 Selenicereus undatus HOM05D005594 ORTHO05D006403 4.9e-06 55.1 79 41.8
Phvul.009G035100 Phaseolus vulgaris HOM05D005594 ORTHO05D006403 6.4e-06 54.7 99 38.4
HanXRQChr15g0472131 Helianthus annuus HOM05D005594 ORTHO05D006403 8.4e-06 54.3 92 37.0
Lj4g0023762 Lotus japonicus HOM05D005594 ORTHO05D006403 8.4e-06 54.3 141 34.0


User provided reference genes

Program Settings