Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO596G0026 Papaver somniferum HOM05D000197 ORTHO05D000114 9.7e-68 260.0 129 100.0
PSO423G0062 Papaver somniferum HOM05D000197 ORTHO05D000114 5.2e-45 184.5 134 72.4
PSO423G0274 Papaver somniferum HOM05D000197 ORTHO05D000114 5.0e-32 141.4 109 66.1
PSO596G0044 Papaver somniferum HOM05D000197 ORTHO05D000114 6.5e-32 141.0 109 66.1
PSO596G0030 Papaver somniferum HOM05D000197 ORTHO05D000114 8.0e-30 134.0 111 62.2
PSO423G0029 Papaver somniferum HOM05D000197 ORTHO05D000114 6.8e-29 131.0 109 60.6
PSO596G0003 Papaver somniferum HOM05D000197 ORTHO05D000114 6.8e-29 131.0 97 66.0
PSO596G0062 Papaver somniferum HOM05D000197 ORTHO05D000114 9.8e-28 127.1 105 59.0
PSO423G0115 Papaver somniferum HOM05D000197 ORTHO05D000114 2.2e-27 125.9 105 57.1
PSO596G0034 Papaver somniferum HOM05D000197 ORTHO05D000114 2.2e-27 125.9 111 58.6
PSO782G2914 Papaver somniferum HOM05D000197 ORTHO05D000114 1.8e-26 122.9 99 62.6
PSO478G0630 Papaver somniferum HOM05D000197 ORTHO05D000114 3.1e-26 122.1 112 56.2
PSO423G0221 Papaver somniferum HOM05D000197 ORTHO05D000114 4.1e-26 121.7 111 55.9
PSO423G0199 Papaver somniferum HOM05D000197 ORTHO05D000114 1.3e-24 116.7 109 56.0
PSO198G0137 Papaver somniferum HOM05D000197 ORTHO05D000114 1.7e-24 116.3 97 56.7
PSO198G0039 Papaver somniferum HOM05D000197 ORTHO05D000114 2.3e-24 115.9 98 56.1
PSO063G4321 Papaver somniferum HOM05D000197 ORTHO05D000114 2.9e-24 115.5 95 61.1
PSO675G8026 Papaver somniferum HOM05D000197 ORTHO05D000114 9.5e-23 110.5 111 52.3
PSO596G0031 Papaver somniferum HOM05D000197 ORTHO05D000114 2.1e-22 109.4 86 62.8
PSO063G6835 Papaver somniferum HOM05D000197 ORTHO05D000114 6.1e-22 107.8 123 47.2
PSO541G5172 Papaver somniferum HOM05D000197 ORTHO05D000114 8.9e-21 104.0 111 51.4
PSO423G0179 Papaver somniferum HOM05D000197 ORTHO05D000114 2.0e-20 102.8 81 63.0
PSO170G1421 Papaver somniferum HOM05D000197 ORTHO05D000114 2.0e-17 92.8 111 48.6
PSO455G0177 Papaver somniferum HOM05D000197 ORTHO05D000114 1.7e-16 89.7 109 48.6
PSO717G0065 Papaver somniferum HOM05D000197 ORTHO05D000114 2.1e-14 82.8 110 42.7
PSO135G0087 Papaver somniferum HOM05D000197 ORTHO05D000114 4.7e-14 81.6 88 48.9
PSO135G0061 Papaver somniferum HOM05D000197 ORTHO05D000114 6.2e-14 81.3 110 42.7
PSO675G1414 Papaver somniferum HOM05D000197 ORTHO05D000114 9.8e-12 73.9 112 41.1
PSO017G2745 Papaver somniferum HOM05D000197 ORTHO05D000114 4.9e-11 71.6 91 44.0
PSO135G0385 Papaver somniferum HOM05D000197 ORTHO05D000114 6.4e-11 71.2 112 40.2
PSO017G7073 Papaver somniferum HOM05D000197 ORTHO05D000114 8.3e-11 70.9 91 44.0
PSO017G6984 Papaver somniferum HOM05D000197 ORTHO05D000114 1.1e-10 70.5 111 41.4
PSO017G3532 Papaver somniferum HOM05D000197 ORTHO05D000114 1.9e-10 69.7 91 44.0
PSO017G0222 Papaver somniferum HOM05D000197 ORTHO05D000114 4.1e-10 68.6 91 41.8
PSO017G4226 Papaver somniferum HOM05D000197 ORTHO05D000114 4.1e-10 68.6 91 41.8
PSO017G5940 Papaver somniferum HOM05D000197 ORTHO05D000114 4.1e-10 68.6 91 41.8
PSO017G1020 Papaver somniferum HOM05D000197 ORTHO05D000114 1.2e-09 67.0 91 40.7
PSO017G6754 Papaver somniferum HOM05D000197 ORTHO05D000114 1.2e-09 67.0 91 40.7
TAR175G0001 Trochodendron aralioides HOM05D000197 ORTHO05D000114 2.7e-09 65.9 87 39.1
TAR180G0003 Trochodendron aralioides HOM05D000197 ORTHO05D000114 2.7e-09 65.9 87 39.1
PSO478G3712 Papaver somniferum HOM05D000197 ORTHO05D000114 6.0e-09 64.7 89 40.4
TAR622G0624 Trochodendron aralioides HOM05D000197 ORTHO05D000114 6.0e-09 64.7 122 34.4
Aqoxy3G00934 Aquilegia oxysepala HOM05D000197 ORTHO05D000114 1.7e-08 63.2 90 37.8
MBI15_g00934_MAGBIO Magnolia biondii HOM05D000197 ORTHO05D000114 2.3e-08 62.8 90 36.7
PGR119G0429 Punica granatum HOM05D000197 ORTHO05D000114 2.3e-08 62.8 92 38.0
TAR371G0022 Trochodendron aralioides HOM05D000197 ORTHO05D000114 3.0e-08 62.4 84 36.9
TAR371G0172 Trochodendron aralioides HOM05D000197 ORTHO05D000114 3.0e-08 62.4 84 36.9
TAR371G0425 Trochodendron aralioides HOM05D000197 ORTHO05D000114 3.0e-08 62.4 84 36.9
TAR371G1130 Trochodendron aralioides HOM05D000197 ORTHO05D000114 3.0e-08 62.4 84 36.9
Nn4g22865 Nelumbo nucifera HOM05D000197 ORTHO05D000114 3.9e-08 62.0 87 41.4
HPP92_015289 Vanilla planifolia HOM05D000197 ORTHO05D000114 5.0e-08 61.6 90 37.8
GSVIVG01011733001 Vitis vinifera HOM05D000197 ORTHO05D000114 5.0e-08 61.6 95 40.0
C08p21740 Brassica napus HOM05D000197 ORTHO05D000114 6.6e-08 61.2 85 40.0
Migut.E00440 Erythranthe guttata HOM05D000197 ORTHO05D000114 6.6e-08 61.2 85 40.0
Prupe.1G258100 Prunus persica HOM05D000197 ORTHO05D000114 6.6e-08 61.2 89 38.2
QL03p036876 Quercus lobata HOM05D000197 ORTHO05D000114 6.6e-08 61.2 87 37.9
Sabra08G0100000 Salix brachista HOM05D000197 ORTHO05D000114 6.6e-08 61.2 97 38.1
AL1G36690 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 8.6e-08 60.8 96 33.3
Sc04g0008950 Simmondsia chinensis HOM05D000197 ORTHO05D000114 8.6e-08 60.8 87 37.9
TAR369G1071 Trochodendron aralioides HOM05D000197 ORTHO05D000114 8.6e-08 60.8 85 38.8
HPP92_010019 Vanilla planifolia HOM05D000197 ORTHO05D000114 8.6e-08 60.8 90 37.8
TAR622G0730 Trochodendron aralioides HOM05D000197 ORTHO05D000114 1.1e-07 60.5 90 34.4
BcaC07g39184 Brassica carinata HOM05D000197 ORTHO05D000114 1.5e-07 60.1 85 38.8
BolC8t49812H Brassica oleracea HOM05D000197 ORTHO05D000114 1.5e-07 60.1 85 38.8
ClCG05G025130 Citrullus lanatus HOM05D000197 ORTHO05D000114 1.5e-07 60.1 86 39.5
QL03p036910 Quercus lobata HOM05D000197 ORTHO05D000114 1.5e-07 60.1 87 36.8
AT1G23120 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 1.9e-07 59.7 96 32.3
BcaB03g11923 Brassica carinata HOM05D000197 ORTHO05D000114 1.9e-07 59.7 85 37.6
A08p28340 Brassica napus HOM05D000197 ORTHO05D000114 1.9e-07 59.7 83 37.3
BraA08t34765Z Brassica rapa HOM05D000197 ORTHO05D000114 1.9e-07 59.7 83 37.3
Eucgr.B02546 Eucalyptus grandis HOM05D000197 ORTHO05D000114 2.5e-07 59.3 90 36.7
Sed0020136 Sechium edule HOM05D000197 ORTHO05D000114 2.5e-07 59.3 80 42.5
TAR374G0922 Trochodendron aralioides HOM05D000197 ORTHO05D000114 2.5e-07 59.3 90 37.8
TAR628G0729 Trochodendron aralioides HOM05D000197 ORTHO05D000114 2.5e-07 59.3 128 31.2
CiPaw.05G148600 Carya illinoinensis HOM05D000197 ORTHO05D000114 3.3e-07 58.9 91 37.4
QL03p033590 Quercus lobata HOM05D000197 ORTHO05D000114 3.3e-07 58.9 87 35.6
QL03p062127 Quercus lobata HOM05D000197 ORTHO05D000114 3.3e-07 58.9 87 37.9
TAR629G0887 Trochodendron aralioides HOM05D000197 ORTHO05D000114 3.3e-07 58.9 85 37.6
Carub.0001s2264 Capsella rubella HOM05D000197 ORTHO05D000114 4.3e-07 58.5 92 34.8
Nitab4.5_0001474g0070 Nicotiana tabacum HOM05D000197 ORTHO05D000114 4.3e-07 58.5 89 36.0
Oeu062656.1 Olea europaea HOM05D000197 ORTHO05D000114 4.3e-07 58.5 87 39.1
BolC6t39555H Brassica oleracea HOM05D000197 ORTHO05D000114 5.6e-07 58.2 91 34.1
Haze_10959 Corylus avellana HOM05D000197 ORTHO05D000114 7.3e-07 57.8 87 35.6
Dinv24891 Davidia involucrata HOM05D000197 ORTHO05D000114 7.3e-07 57.8 90 36.7
FAN11G1691 Fragaria x ananassa HOM05D000197 ORTHO05D000114 7.3e-07 57.8 80 41.2
Rhsim12G0123000 Rhododendron simsii HOM05D000197 ORTHO05D000114 7.3e-07 57.8 82 36.6
SalBow8G3636 Salvia bowleyana HOM05D000197 ORTHO05D000114 7.3e-07 57.8 92 37.0
Actinidia15014 Actinidia chinensis HOM05D000197 ORTHO05D000114 9.5e-07 57.4 85 34.1
Aqoxy6G01397 Aquilegia oxysepala HOM05D000197 ORTHO05D000114 9.5e-07 57.4 93 35.5
COL.COLO4_13116 Corchorus olitorius HOM05D000197 ORTHO05D000114 9.5e-07 57.4 84 35.7
COL.COLO4_13135 Corchorus olitorius HOM05D000197 ORTHO05D000114 9.5e-07 57.4 82 34.1
FvH4_4g34890 Fragaria vesca HOM05D000197 ORTHO05D000114 9.5e-07 57.4 92 35.9
FAN07G2092 Fragaria x ananassa HOM05D000197 ORTHO05D000114 9.5e-07 57.4 92 35.9
FAN12G1601 Fragaria x ananassa HOM05D000197 ORTHO05D000114 9.5e-07 57.4 92 35.9
FAN17G2379 Fragaria x ananassa HOM05D000197 ORTHO05D000114 9.5e-07 57.4 92 35.9
Nitab4.5_0005555g0020 Nicotiana tabacum HOM05D000197 ORTHO05D000114 9.5e-07 57.4 86 36.0
Hund05969 Selenicereus undatus HOM05D000197 ORTHO05D000114 9.5e-07 57.4 88 36.4
SEGI_04347 Sequoiadendron giganteum HOM05D000197 ORTHO05D000114 9.5e-07 57.4 83 43.4
MSTRG.2157 Avicennia marina HOM05D000197 ORTHO05D000114 1.2e-06 57.0 84 36.9
BcaC08g46534 Brassica carinata HOM05D000197 ORTHO05D000114 1.2e-06 57.0 90 35.6
C06p44950 Brassica napus HOM05D000197 ORTHO05D000114 1.2e-06 57.0 86 36.0
CiPaw.06G073000 Carya illinoinensis HOM05D000197 ORTHO05D000114 1.2e-06 57.0 90 35.6
Dinv18604 Davidia involucrata HOM05D000197 ORTHO05D000114 1.2e-06 57.0 87 36.8
Dinv26220 Davidia involucrata HOM05D000197 ORTHO05D000114 1.2e-06 57.0 87 36.8
MD13G1088200 Malus domestica HOM05D000197 ORTHO05D000114 1.2e-06 57.0 85 38.8
QL09p053276 Quercus lobata HOM05D000197 ORTHO05D000114 1.2e-06 57.0 91 37.4
Solyc05g005865.1 Solanum lycopersicum HOM05D000197 ORTHO05D000114 1.2e-06 57.0 87 33.3
GSVIVG01011724001 Vitis vinifera HOM05D000197 ORTHO05D000114 1.2e-06 57.0 84 35.7
Zm00001eb080380 Zea mays HOM05D000197 ORTHO05D000114 1.2e-06 57.0 91 31.9
Atru.chr11.872 Acer truncatum HOM05D000197 ORTHO05D000114 1.6e-06 56.6 89 37.1
Cfa014970 Carpinus fangiana HOM05D000197 ORTHO05D000114 1.6e-06 56.6 87 35.6
Haze_10956 Corylus avellana HOM05D000197 ORTHO05D000114 1.6e-06 56.6 87 36.8
FvH4_3g29540 Fragaria vesca HOM05D000197 ORTHO05D000114 1.6e-06 56.6 80 40.0
MD16G1088600 Malus domestica HOM05D000197 ORTHO05D000114 1.6e-06 56.6 97 36.1
Manes.05G090000 Manihot esculenta HOM05D000197 ORTHO05D000114 1.6e-06 56.6 87 37.9
Aqoxy3G03061 Aquilegia oxysepala HOM05D000197 ORTHO05D000114 2.1e-06 56.2 93 35.5
A08p28360 Brassica napus HOM05D000197 ORTHO05D000114 2.1e-06 56.2 97 35.1
CSS0039522 Camellia sinensis var. sinensis HOM05D000197 ORTHO05D000114 2.1e-06 56.2 88 33.0
Cfa009126 Carpinus fangiana HOM05D000197 ORTHO05D000114 2.1e-06 56.2 86 37.2
COL.COLO4_13119 Corchorus olitorius HOM05D000197 ORTHO05D000114 2.1e-06 56.2 89 33.7
COL.COLO4_13125 Corchorus olitorius HOM05D000197 ORTHO05D000114 2.1e-06 56.2 89 33.7
Haze_12156 Corylus avellana HOM05D000197 ORTHO05D000114 2.1e-06 56.2 86 37.2
Hma1.2p1_0346F.1_g131440 Hydrangea macrophylla HOM05D000197 ORTHO05D000114 2.1e-06 56.2 96 33.3
QL09p053306 Quercus lobata HOM05D000197 ORTHO05D000114 2.1e-06 56.2 91 37.4
vmacro16271 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 2.1e-06 56.2 80 36.2
Ah.03g132470 Amaranthus hybridus HOM05D000197 ORTHO05D000114 2.8e-06 55.8 88 36.4
Carub.0001s2267 Capsella rubella HOM05D000197 ORTHO05D000114 2.8e-06 55.8 95 33.7
CiPaw.06G047600 Carya illinoinensis HOM05D000197 ORTHO05D000114 2.8e-06 55.8 91 34.1
Dinv26219 Davidia involucrata HOM05D000197 ORTHO05D000114 2.8e-06 55.8 87 33.3
Psat4g125760 Pisum sativum HOM05D000197 ORTHO05D000114 2.8e-06 55.8 89 34.8
RcHm_v2.0_Chr4g0444321 Rosa chinensis HOM05D000197 ORTHO05D000114 2.8e-06 55.8 90 36.7
Sp1g20560 Schrenkiella parvula HOM05D000197 ORTHO05D000114 2.8e-06 55.8 96 32.3
Atru.chr11.1977 Acer truncatum HOM05D000197 ORTHO05D000114 3.6e-06 55.5 82 36.6
Ah.02g129760 Amaranthus hybridus HOM05D000197 ORTHO05D000114 3.6e-06 55.5 84 34.5
Ah.02g129770 Amaranthus hybridus HOM05D000197 ORTHO05D000114 3.6e-06 55.5 84 34.5
BcaB03g15577 Brassica carinata HOM05D000197 ORTHO05D000114 3.6e-06 55.5 90 35.6
BcaB03g15584 Brassica carinata HOM05D000197 ORTHO05D000114 3.6e-06 55.5 90 35.6
COL.COLO4_13128 Corchorus olitorius HOM05D000197 ORTHO05D000114 3.6e-06 55.5 89 33.7
CsaV3_5G031770 Cucumis sativus L. HOM05D000197 ORTHO05D000114 3.6e-06 55.5 79 39.2
Lsat_1_v5_gn_3_48941 Lactuca sativa HOM05D000197 ORTHO05D000114 3.6e-06 55.5 90 31.1
Peaxi162Scf00421g00328 Petunia axillaris HOM05D000197 ORTHO05D000114 3.6e-06 55.5 89 32.6
Sopen05g001890 Solanum pennellii HOM05D000197 ORTHO05D000114 3.6e-06 55.5 87 32.2
TWI75G0119 Tripterygium wilfordii HOM05D000197 ORTHO05D000114 3.6e-06 55.5 90 35.6
GSVIVG01011726001 Vitis vinifera HOM05D000197 ORTHO05D000114 3.6e-06 55.5 80 35.0
C07p20100 Brassica napus HOM05D000197 ORTHO05D000114 4.7e-06 55.1 88 33.0
BolC7t42531H Brassica oleracea HOM05D000197 ORTHO05D000114 4.7e-06 55.1 88 33.0
Carub.0002s1766 Capsella rubella HOM05D000197 ORTHO05D000114 4.7e-06 55.1 90 35.6
CiPaw.05G195100 Carya illinoinensis HOM05D000197 ORTHO05D000114 4.7e-06 55.1 88 35.2
Cc11_g14370 Coffea canephora HOM05D000197 ORTHO05D000114 4.7e-06 55.1 90 34.4
GSVIVG01011730001 Vitis vinifera HOM05D000197 ORTHO05D000114 4.7e-06 55.1 80 36.2
AT1G70890 Arabidopsis thaliana HOM05D000197 ORTHO05D000114 6.2e-06 54.7 86 36.0
BcaB03g14851 Brassica carinata HOM05D000197 ORTHO05D000114 6.2e-06 54.7 90 35.6
COL.COLO4_13137 Corchorus olitorius HOM05D000197 ORTHO05D000114 6.2e-06 54.7 81 32.1
Dinv18606 Davidia involucrata HOM05D000197 ORTHO05D000114 6.2e-06 54.7 87 32.2
Dinv26222 Davidia involucrata HOM05D000197 ORTHO05D000114 6.2e-06 54.7 87 32.2
Dinv28034 Davidia involucrata HOM05D000197 ORTHO05D000114 6.2e-06 54.7 86 37.2
Lsat_1_v5_gn_5_100681 Lactuca sativa HOM05D000197 ORTHO05D000114 6.2e-06 54.7 84 35.7
AL1G37780 Arabidopsis lyrata HOM05D000197 ORTHO05D000114 8.1e-06 54.3 90 33.3
A07p13480 Brassica napus HOM05D000197 ORTHO05D000114 8.1e-06 54.3 96 31.2
Haze_10953 Corylus avellana HOM05D000197 ORTHO05D000114 8.1e-06 54.3 82 36.6
Dinv26218 Davidia involucrata HOM05D000197 ORTHO05D000114 8.1e-06 54.3 82 35.4
Duzib268G0047 Durio zibethinus HOM05D000197 ORTHO05D000114 8.1e-06 54.3 86 34.9
RcHm_v2.0_Chr4g0441721 Rosa chinensis HOM05D000197 ORTHO05D000114 8.1e-06 54.3 82 35.4
Sabra10G0068600 Salix brachista HOM05D000197 ORTHO05D000114 8.1e-06 54.3 91 36.3
PGSC0003DMG400004131 Solanum tuberosum HOM05D000197 ORTHO05D000114 8.1e-06 54.3 86 31.4
vmacro16272 Vaccinium macrocarpon HOM05D000197 ORTHO05D000114 8.1e-06 54.3 85 31.8


User provided reference genes

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