Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO591G0441 Papaver somniferum HOM05D007009 ORTHO05D008451 2.4e-116 422.2 214 100.0
PSO832G0198 Papaver somniferum HOM05D007009 ORTHO05D008451 4.2e-108 394.8 214 93.5
Cfa009076 Carpinus fangiana HOM05D007009 ORTHO05D008451 3.4e-57 225.7 212 58.0
Atru.chr11.1917 Acer truncatum HOM05D007009 ORTHO05D008451 2.2e-56 223.0 200 58.5
TAR374G0768 Trochodendron aralioides HOM05D007009 ORTHO05D008451 3.1e-55 219.2 225 54.7
Actinidia08196 Actinidia chinensis HOM05D007009 ORTHO05D008451 2.0e-54 216.5 212 54.2
Nn4g22971 Nelumbo nucifera HOM05D007009 ORTHO05D008451 2.0e-54 216.5 180 61.7
Prupe.1G262900 Prunus persica HOM05D007009 ORTHO05D008451 2.7e-54 216.1 216 56.0
Ciclev10032750m.g Citrus clementina HOM05D007009 ORTHO05D008451 1.5e-52 210.3 213 56.3
Aqoxy3G03177 Aquilegia oxysepala HOM05D007009 ORTHO05D008451 5.5e-52 208.4 181 59.1
Nitab4.5_0001030g0090 Nicotiana tabacum HOM05D007009 ORTHO05D008451 2.1e-51 206.5 219 52.1
TWI18G0515 Tripterygium wilfordii HOM05D007009 ORTHO05D008451 4.7e-51 205.3 213 53.1
GSVIVG01020129001 Vitis vinifera HOM05D007009 ORTHO05D008451 6.1e-51 204.9 202 54.5
Dinv24931 Davidia involucrata HOM05D000094 ORTHO05D002904 8.0e-51 204.5 177 59.9
Dinv31143 Davidia involucrata HOM05D007009 ORTHO05D008451 1.4e-50 203.8 225 51.1
Cc11_g13910 Coffea canephora HOM05D007009 ORTHO05D008451 5.2e-50 201.8 178 59.0
Nitab4.5_0008607g0010 Nicotiana tabacum HOM05D007009 ORTHO05D008451 6.8e-50 201.4 219 50.7
CSS0013437 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 1.5e-49 200.3 210 51.0
Medtr5g037120 Medicago truncatula HOM05D007009 ORTHO05D008451 1.5e-49 200.3 213 52.1
Glyma.02G026000 Glycine max HOM05D007009 ORTHO05D008451 2.6e-49 199.5 218 53.7
CsaV3_5G032050 Cucumis sativus L. HOM05D007009 ORTHO05D008451 4.4e-49 198.7 214 54.7
COL.COLO4_36263 Corchorus olitorius HOM05D007009 ORTHO05D008451 1.7e-48 196.8 210 51.4
ClCG05G024860 Citrullus lanatus HOM05D007009 ORTHO05D008451 2.8e-48 196.1 210 55.7
CANSAT01G1662 Cannabis sativa HOM05D007009 ORTHO05D008451 3.7e-48 195.7 205 52.2
PGSC0003DMG401022631 Solanum tuberosum HOM05D007009 ORTHO05D008451 1.1e-47 194.1 223 48.4
CiPaw.06G077800 Carya illinoinensis HOM05D007009 ORTHO05D008451 2.4e-47 193.0 177 57.1
Hund25306 Selenicereus undatus HOM05D007009 ORTHO05D008451 3.1e-47 192.6 212 49.5
Manes.01G193800 Manihot esculenta HOM05D007009 ORTHO05D008451 5.4e-47 191.8 208 51.4
QL03p067658 Quercus lobata HOM05D007009 ORTHO05D008451 7.0e-47 191.4 219 52.1
Eucgr.B03385 Eucalyptus grandis HOM05D007009 ORTHO05D008451 1.6e-46 190.3 219 51.6
PGR102G0074 Punica granatum HOM05D007009 ORTHO05D008451 1.6e-46 190.3 216 52.3
Solyc05g006580.3 Solanum lycopersicum HOM05D007009 ORTHO05D008451 2.0e-46 189.9 226 48.2
Thecc.02G237500 Theobroma cacao HOM05D007009 ORTHO05D008451 2.7e-46 189.5 177 55.9
Glyma.01G038700 Glycine max HOM05D007009 ORTHO05D008451 1.0e-45 187.6 176 56.2
Sed0027578 Sechium edule HOM05D007009 ORTHO05D008451 1.0e-45 187.6 218 51.4
Sopen05g002530 Solanum pennellii HOM05D007009 ORTHO05D008451 1.0e-45 187.6 226 47.8
Hma1.2p1_0265F.1_g106360 Hydrangea macrophylla HOM05D007009 ORTHO05D008451 2.3e-45 186.4 217 50.7
arahy.Tifrunner.gnm1.ann1.8B6YVA Arachis hypogaea HOM05D007009 ORTHO05D008451 3.8e-45 185.7 225 49.8
Gohir.A05G320100 Gossypium hirsutum HOM05D007009 ORTHO05D008451 5.0e-45 185.3 210 49.0
Lj2g0006218 Lotus japonicus HOM05D007009 ORTHO05D008451 5.0e-45 185.3 224 50.4
SalBow2G0075 Salvia bowleyana HOM05D007009 ORTHO05D008451 8.6e-45 184.5 201 52.2
Lalb_Chr05g0217381 Lupinus albus HOM05D007009 ORTHO05D008451 1.1e-44 184.1 211 49.8
arahy.Tifrunner.gnm1.ann1.IMS4B0 Arachis hypogaea HOM05D007009 ORTHO05D008451 2.5e-44 183.0 225 49.8
Duzib251G0800 Durio zibethinus HOM05D007009 ORTHO05D008451 4.3e-44 182.2 208 49.5
Ah.03g132140 Amaranthus hybridus HOM05D007009 ORTHO05D008451 5.6e-44 181.8 221 46.6
TPR.G26720 Trifolium pratense HOM05D007009 ORTHO05D008451 5.6e-44 181.8 220 48.6
CiPaw.05G143700 Carya illinoinensis HOM05D007009 ORTHO05D008451 7.3e-44 181.4 217 50.2
Gohir.D05G322400 Gossypium hirsutum HOM05D007009 ORTHO05D008451 9.5e-44 181.0 210 47.6
Gorai.009G346000 Gossypium raimondii HOM05D007009 ORTHO05D008451 2.1e-43 179.9 210 47.6
CAN.G27.64 Capsicum annuum HOM05D007009 ORTHO05D008451 2.8e-43 179.5 212 47.2
Peaxi162Scf00828g00312 Petunia axillaris HOM05D007009 ORTHO05D008451 3.6e-43 179.1 211 49.3
FAN22G1672 Fragaria x ananassa HOM05D007009 ORTHO05D008451 1.4e-42 177.2 188 52.1
FAN07G0981 Fragaria x ananassa HOM05D007009 ORTHO05D008451 3.0e-42 176.0 188 52.1
FAN17G0686 Fragaria x ananassa HOM05D007009 ORTHO05D008451 6.8e-42 174.9 202 49.0
FvH4_4g35380 Fragaria vesca HOM05D007009 ORTHO05D008451 8.9e-42 174.5 210 48.6
FAN12G0678 Fragaria x ananassa HOM05D007009 ORTHO05D008451 8.9e-42 174.5 210 48.6
Haze_12109 Corylus avellana HOM05D007009 ORTHO05D008451 1.5e-41 173.7 192 52.6
MSTRG.7846 Avicennia marina HOM05D007009 ORTHO05D008451 2.0e-41 173.3 201 48.8
Sc11g0001470 Simmondsia chinensis HOM05D007009 ORTHO05D008451 2.6e-41 172.9 214 46.3
Migut.L01370 Erythranthe guttata HOM05D007009 ORTHO05D008451 3.4e-41 172.6 214 46.7
AUR62026539 Chenopodium quinoa HOM05D007009 ORTHO05D008451 5.7e-41 171.8 201 48.8
RcHm_v2.0_Chr4g0444991 Rosa chinensis HOM05D007009 ORTHO05D008451 7.5e-41 171.4 180 51.1
Sp5g25090 Schrenkiella parvula HOM05D007009 ORTHO05D008451 9.8e-41 171.0 210 49.0
C06p43850 Brassica napus HOM05D007009 ORTHO05D008451 1.3e-40 170.6 184 51.1
MD16G1083100 Malus domestica HOM05D007009 ORTHO05D008451 1.7e-40 170.2 218 48.6
Potri.008G191700 Populus trichocarpa HOM05D007009 ORTHO05D008451 1.7e-40 170.2 179 55.9
Potri.010G039466 Populus trichocarpa HOM05D007009 ORTHO05D008451 3.7e-40 169.1 200 52.0
Thhalv10019139m.g Eutrema salsugineum HOM05D007009 ORTHO05D008451 6.4e-40 168.3 208 47.1
BolC6t39457H Brassica oleracea HOM05D007009 ORTHO05D008451 1.4e-39 167.2 221 46.2
Aa31LG4G10880 Aethionema arabicum HOM05D007009 ORTHO05D008451 3.2e-39 166.0 183 50.8
Ca_15204_v3 Cicer arietinum L. HOM05D007009 ORTHO05D008451 2.7e-38 162.9 165 56.4
THA.LOC104808792 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 3.5e-38 162.5 213 46.0
BcaC08g46448 Brassica carinata HOM05D007009 ORTHO05D008451 5.0e-37 158.7 222 43.2
Carub.0002s1666 Capsella rubella HOM05D007009 ORTHO05D008451 1.5e-36 157.1 215 45.6
MELO3C012041.2 Cucumis melo HOM05D007009 ORTHO05D008451 4.3e-36 155.6 169 55.0
Duzib268G1291 Durio zibethinus HOM05D007009 ORTHO05D008451 2.1e-35 153.3 171 51.5
Psat2g116400 Pisum sativum HOM05D007009 ORTHO05D008451 2.1e-35 153.3 181 48.6
VMungo1215G0662 Vigna mungo HOM05D007009 ORTHO05D008451 3.6e-35 152.5 178 52.8
Sabra10G0027300 Salix brachista HOM05D007009 ORTHO05D008451 6.2e-35 151.8 262 41.2
CARHR063080 Cardamine hirsuta HOM05D007009 ORTHO05D008451 8.0e-35 151.4 216 44.0
Lj6A798T55 Lonicera japonica HOM05D007009 ORTHO05D008451 8.0e-35 151.4 189 48.1
AT1G69980 Arabidopsis thaliana HOM05D007009 ORTHO05D008451 4.0e-34 149.1 220 43.2
AL2G29220 Arabidopsis lyrata HOM05D007009 ORTHO05D008451 1.2e-33 147.5 220 44.1
Rhsim12G0053000 Rhododendron simsii HOM05D007009 ORTHO05D008451 2.0e-33 146.7 188 47.3
BcaB03g14776 Brassica carinata HOM05D007009 ORTHO05D008451 2.6e-33 146.4 197 45.7
vmacro01210 Vaccinium macrocarpon HOM05D007009 ORTHO05D008451 7.5e-33 144.8 286 36.0
HanXRQChr08g0209091 Helianthus annuus HOM05D007009 ORTHO05D008451 1.3e-32 144.1 181 46.4
Zm00001eb104690 Zea mays HOM05D007009 ORTHO05D008451 2.4e-31 139.8 178 46.1
Os09g0560400 Oryza sativa ssp. japonica HOM05D007009 ORTHO05D008451 7.0e-31 138.3 171 43.3
EL10Ac6g13085 Beta vulgaris HOM05D007009 ORTHO05D008451 9.2e-31 137.9 162 46.3
DCAR_026574 Daucus carota HOM05D007009 ORTHO05D008451 1.6e-30 137.1 174 42.5
Cpa.g.sc5.312 Carica papaya HOM05D007009 ORTHO05D008451 2.7e-30 136.3 141 54.6
A07p36430 Brassica napus HOM05D007009 ORTHO05D008451 1.3e-29 134.0 175 47.4
SGA_v2.0_scaffold166G38305 Striga asiatica HOM05D007009 ORTHO05D008451 3.9e-29 132.5 169 46.2
unitig_8.g2944 Utricularia gibba HOM05D007009 ORTHO05D008451 3.9e-29 132.5 177 45.2
Lsat_1_v5_gn_8_161781 Lactuca sativa HOM05D007009 ORTHO05D008451 8.6e-29 131.3 175 40.6
ECA233G5592 Erigeron canadensis HOM05D007009 ORTHO05D008451 1.5e-28 130.6 186 41.9
Phvul.002G078700 Phaseolus vulgaris HOM05D007009 ORTHO05D008451 4.3e-28 129.0 177 41.8
AUR62039445 Chenopodium quinoa HOM05D007009 ORTHO05D008451 1.7e-24 117.1 142 46.5
BcaB03g14779 Brassica carinata HOM05D007009 ORTHO05D008451 3.7e-24 115.9 211 41.2
CDE10G1217 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 6.4e-24 115.2 147 44.9
Mapoly0049s0134 Marchantia polymorpha HOM05D007009 ORTHO05D008451 3.5e-22 109.4 163 38.0
MBI15_g31419_MAGBIO Magnolia biondii HOM05D007009 ORTHO05D008451 8.1e-19 98.2 104 55.8
Pp3c4_16120 Physcomitrium patens HOM05D007009 ORTHO05D008451 1.0e-13 81.3 172 32.0
BolC8t48483H Brassica oleracea HOM05D007009 ORTHO05D008451 1.6e-11 73.9 89 46.1
C03p84900 Brassica napus HOM05D000455 ORTHO05D008451 2.1e-11 73.6 116 41.4
BolC3t20782H Brassica oleracea HOM05D000455 ORTHO05D008451 2.1e-11 73.6 116 41.4
CSS0007469 Camellia sinensis var. sinensis HOM05D007009 ORTHO05D008451 1.1e-07 61.2 69 42.0
THA.LOC104822186 Tarenaya hassleriana HOM05D007009 ORTHO05D008451 7.1e-07 58.5 151 35.1
CDE10G0656 Ceratophyllum demersum HOM05D007009 ORTHO05D008451 2.7e-06 56.6 69 44.9
SEGI_38065 Sequoiadendron giganteum HOM05D007009 ORTHO05D008451 3.5e-06 56.2 123 30.9
BraA03t15512Z Brassica rapa HOM05D007009 ORTHO05D031827 4.6e-06 55.8 86 40.7


User provided reference genes

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